RNA–Protein interactions for RNA: ENST00000585931.5

LDLRAD4-205, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-205ENST00000585931 SSRP1Q08945 709 aaKnown RBP17.58■□□□□ 0.4
LDLRAD4-205ENST00000585931 NBPF11Q86T75 865 aa17.58■□□□□ 0.4
LDLRAD4-205ENST00000585931 TAOK2Q9UL54 1235 aa17.58■□□□□ 0.4
LDLRAD4-205ENST00000585931 ROBO3Q96MS0 1386 aa17.58■□□□□ 0.4
LDLRAD4-205ENST00000585931 TROAPQ12815 778 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 AMOTL1Q8IY63 956 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 SLC44A5Q8NCS7 719 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 USP28Q96RU2 1077 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 CCDC196A0A1B0GTZ2 297 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 KIF28PB7ZC32 967 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 TPM2P07951 284 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 SCNN1DP51172 638 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 TFAP4Q01664 338 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 CATIPQ7Z7H3 387 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 CRACR2BQ8N4Y2 399 aaPredicted RBP17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 SYAP1Q96A49 352 aaPredicted RBP17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 MKNK2Q9HBH9 465 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 IL17RBQ9NRM6 502 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 DLEC1Q9Y238 1755 aa17.57■□□□□ 0.4
LDLRAD4-205ENST00000585931 STK36Q9NRP7 1315 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 KIF23Q02241 960 aaPredicted RBP17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 KRT40Q6A162 431 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 PGBD1Q96JS3 809 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 SNED1Q8TER0 1413 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 SCN9AQ15858 1988 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 C21orf2O43822 256 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 ECE2O60344 883 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 LRSAM1Q6UWE0 723 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 RCOR1Q9UKL0 485 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 ECM29Q5VYK3 1845 aa17.56■□□□□ 0.4
LDLRAD4-205ENST00000585931 PPP2R5BQ15173 497 aa17.55■□□□□ 0.4
LDLRAD4-205ENST00000585931 AOC3Q16853 763 aa17.55■□□□□ 0.4
LDLRAD4-205ENST00000585931 PANK2Q9BZ23 570 aa17.55■□□□□ 0.4
LDLRAD4-205ENST00000585931 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
LDLRAD4-205ENST00000585931 MYH1P12882 1939 aa17.55■□□□□ 0.4
LDLRAD4-205ENST00000585931 ATL3Q6DD88 541 aa17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 ZNF396Q96N95 335 aaPredicted RBP17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 DDX60LQ5H9U9 1706 aaKnown RBP17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 USP17L3A6NCW0 530 aa17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 USP17L4A6NCW7 530 aa17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 LIG1P18858 919 aa17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 KCNA3P22001 575 aa17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 CCDC183Q5T5S1 534 aa17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 STRIP1Q5VSL9 837 aa17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 USP17L1Q7RTZ2 530 aa17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 TRIM22Q8IYM9 498 aa17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 ZNF444Q8N0Y2 327 aaPredicted RBP17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 SLC16A10Q8TF71 515 aa17.54■□□□□ 0.4
LDLRAD4-205ENST00000585931 GOLGA6L4A6NEF3 574 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 WDHD1O75717 1129 aaPredicted RBP17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 PLEKHA8P1O95397 391 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 RASA1P20936 1047 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 CDK8P49336 464 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 FUT2Q10981 343 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 PICALMQ13492 652 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 DACT2Q5SW24 774 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 APOBEC3HQ6NTF7 200 aaKnown RBP17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 HHIPL2Q6UWX4 724 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 C16orf86Q6ZW13 317 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 BRAPQ7Z569 592 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 DDX4Q9NQI0 724 aaKnown RBP17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 FOCADQ5VW36 1801 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 DDAH1O94760 285 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 DEXIO95424 95 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 TSPY3P0CV98 308 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 TSPY8P0CW00 308 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 CALM1P0DP23 149 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 CALM2P0DP24 149 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 CALM3P0DP25 149 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 KIAA2012Q0VF49 1180 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 MYSM1Q5VVJ2 828 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 CC2D2BQ6DHV5 1058 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 KIAA0825Q8IV33 1275 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 TTLL6Q8N841 843 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 WASF1Q92558 559 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 USP40Q9NVE5 1235 aa17.53■□□□□ 0.4
LDLRAD4-205ENST00000585931 DPEP1P16444 411 aa17.52■□□□□ 0.4
LDLRAD4-205ENST00000585931 NT5C2P49902 561 aa17.52■□□□□ 0.4
LDLRAD4-205ENST00000585931 DGKHQ86XP1 1220 aa17.52■□□□□ 0.4
LDLRAD4-205ENST00000585931 TEKT1Q969V4 418 aa17.52■□□□□ 0.4
LDLRAD4-205ENST00000585931 CLIC4Q9Y696 253 aa17.52■□□□□ 0.4
LDLRAD4-205ENST00000585931 ADAMTSL1Q8N6G6 1762 aa17.52■□□□□ 0.4
LDLRAD4-205ENST00000585931 BAZ2BQ9UIF8 2168 aaKnown RBP17.52■□□□□ 0.4
LDLRAD4-205ENST00000585931 TRIM29Q14134 588 aa17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 CDC42EP5Q6NZY7 148 aa17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 RNF26Q9BY78 433 aaPredicted RBP17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 RBSNQ9H1K0 784 aa17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 TCP11L1Q9NUJ3 509 aa17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 RBM28Q9NW13 759 aaKnown RBP17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 RTEL1Q9NZ71 1219 aa17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 PCDHAC2Q9Y5I4 1007 aa17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 U2AF2P26368 475 aaKnown RBP eCLIP17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 CRKP46108 304 aa17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 SMAP1Q8IYB5 467 aaPredicted RBP17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 ANKS1AQ92625 1134 aa17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 ZNF287Q9HBT7 754 aa17.51■□□□□ 0.39
LDLRAD4-205ENST00000585931 KCNJ14Q9UNX9 436 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms