RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 TRIM34Q9BYJ4 488 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 NACAP1Q9BZK3 213 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 PICK1Q9NRD5 415 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 GTF2A2P52657 109 aa13.89□□□□□ -0.19
LRFN3-202ENST00000585876 MFAP1P55081 439 aaKnown RBP13.89□□□□□ -0.19
LRFN3-202ENST00000585876 SLC4A8Q2Y0W8 1093 aa13.89□□□□□ -0.19
LRFN3-202ENST00000585876 CCDC129Q6ZRS4 1044 aa13.89□□□□□ -0.19
LRFN3-202ENST00000585876 ZNF589Q86UQ0 364 aaPredicted RBP13.89□□□□□ -0.19
LRFN3-202ENST00000585876 ZBTB21Q9ULJ3 1066 aa13.89□□□□□ -0.19
LRFN3-202ENST00000585876 AFG3L2Q9Y4W6 797 aa13.89□□□□□ -0.19
LRFN3-202ENST00000585876 PARP14Q460N5 1801 aa13.89□□□□□ -0.19
LRFN3-202ENST00000585876 CYP2D7A0A087X1C5 515 aa13.88□□□□□ -0.19
LRFN3-202ENST00000585876 CXCL11O14625 94 aa13.88□□□□□ -0.19
LRFN3-202ENST00000585876 HSPA1AP0DMV8 641 aaKnown RBP13.88□□□□□ -0.19
LRFN3-202ENST00000585876 HSPA1BP0DMV9 641 aaKnown RBP13.88□□□□□ -0.19
LRFN3-202ENST00000585876 TDO2P48775 406 aa13.88□□□□□ -0.19
LRFN3-202ENST00000585876 JAG1P78504 1218 aa13.88□□□□□ -0.19
LRFN3-202ENST00000585876 SNAPC2Q13487 334 aa13.88□□□□□ -0.19
LRFN3-202ENST00000585876 WDR18Q9BV38 432 aa13.88□□□□□ -0.19
LRFN3-202ENST00000585876 ZCCHC17Q9NP64 241 aaKnown RBP13.88□□□□□ -0.19
LRFN3-202ENST00000585876 HTTP42858 3142 aa13.88□□□□□ -0.19
LRFN3-202ENST00000585876 A0A0G2JLL6 359 aaPredicted RBP13.87□□□□□ -0.19
LRFN3-202ENST00000585876 HSPD1P10809 573 aaKnown RBP13.87□□□□□ -0.19
LRFN3-202ENST00000585876 CETPP11597 493 aa13.87□□□□□ -0.19
LRFN3-202ENST00000585876 CHMLP26374 656 aa13.87□□□□□ -0.19
LRFN3-202ENST00000585876 MKRN3Q13064 507 aaKnown RBP13.87□□□□□ -0.19
LRFN3-202ENST00000585876 MOGSQ13724 837 aa13.87□□□□□ -0.19
LRFN3-202ENST00000585876 CERKLQ49MI3 558 aaPredicted RBP13.87□□□□□ -0.19
LRFN3-202ENST00000585876 VPS53Q5VIR6 699 aa13.87□□□□□ -0.19
LRFN3-202ENST00000585876 CWC27Q6UX04 472 aaKnown RBP13.87□□□□□ -0.19
LRFN3-202ENST00000585876 PRRT2Q7Z6L0 340 aaPredicted RBP13.87□□□□□ -0.19
LRFN3-202ENST00000585876 IFNL1Q8IU54 200 aa13.87□□□□□ -0.19
LRFN3-202ENST00000585876 SLC44A5Q8NCS7 719 aa13.87□□□□□ -0.19
LRFN3-202ENST00000585876 BRI3BPQ8WY22 251 aa13.87□□□□□ -0.19
LRFN3-202ENST00000585876 NAPBQ9H115 298 aa13.87□□□□□ -0.19
LRFN3-202ENST00000585876 ANAPC4Q9UJX5 808 aa13.87□□□□□ -0.19
LRFN3-202ENST00000585876 ZHX2Q9Y6X8 837 aa13.87□□□□□ -0.19
LRFN3-202ENST00000585876 PLIN4Q96Q06 1357 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 CASP8AP2Q9UKL3 1982 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 USP17L5A8MUK1 530 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 SMIM22K7EJ46 135 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 IGF2BP3O00425 579 aaKnown RBP eCLIP13.86□□□□□ -0.19
LRFN3-202ENST00000585876 GDF11O95390 407 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 ALDH1A1P00352 501 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 APPP05067 770 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 CDK8P49336 464 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 SHROOM1Q2M3G4 852 aaPredicted RBP13.86□□□□□ -0.19
LRFN3-202ENST00000585876 NOM1Q5C9Z4 860 aaKnown RBP13.86□□□□□ -0.19
LRFN3-202ENST00000585876 SKAP1Q86WV1 359 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 DYNLL2Q96FJ2 89 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 CCDC17Q96LX7 622 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 PTPN18Q99952 460 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 BEGAINQ9BUH8 593 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 IL25Q9H293 177 aa13.86□□□□□ -0.19
LRFN3-202ENST00000585876 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.86□□□□□ -0.19
LRFN3-202ENST00000585876 CCL15-CCL14A0A0B4J2E2 113 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 FOXN1O15353 648 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 GH2P01242 217 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 PPARAQ07869 468 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 CCL15Q16663 113 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 ABCB5Q2M3G0 1257 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 TMEM179Q6ZVK1 233 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 ZNF280CQ8ND82 737 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 RUFY2Q8WXA3 655 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 DSCC1Q9BVC3 393 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 AS3MTQ9HBK9 375 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 RNF186Q9NXI6 227 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 RLFQ13129 1914 aa13.85□□□□□ -0.19
LRFN3-202ENST00000585876 A0A0G2JMZ2 1700 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 SGSM2O43147 1006 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 FGAP02671 866 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 FGRP09769 529 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 GUCY1A2P33402 732 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 SH3D19Q5HYK7 790 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 OTUD7BQ6GQQ9 843 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 ANKRD23Q86SG2 305 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 PROCA1Q8NCQ7 364 aaPredicted RBP13.84□□□□□ -0.19
LRFN3-202ENST00000585876 ZNF287Q9HBT7 754 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
LRFN3-202ENST00000585876 SLC45A1Q9Y2W3 748 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 MGAMO43451 1857 aa13.84□□□□□ -0.19
LRFN3-202ENST00000585876 TRIM75PA6NK02 468 aa13.83□□□□□ -0.2
LRFN3-202ENST00000585876 MINDY4BA8MYZ0 360 aa13.83□□□□□ -0.2
LRFN3-202ENST00000585876 HSPA8P11142 646 aaKnown RBP13.83□□□□□ -0.2
LRFN3-202ENST00000585876 PCP11498 1178 aaKnown RBP13.83□□□□□ -0.2
LRFN3-202ENST00000585876 RASA1P20936 1047 aa13.83□□□□□ -0.2
LRFN3-202ENST00000585876 CTCFP49711 727 aaPredicted RBP13.83□□□□□ -0.2
LRFN3-202ENST00000585876 FASTKD5Q7L8L6 764 aaKnown RBP13.83□□□□□ -0.2
LRFN3-202ENST00000585876 CCDC84Q86UT8 332 aaPredicted RBP13.83□□□□□ -0.2
LRFN3-202ENST00000585876 FAM43AQ8N2R8 423 aa13.83□□□□□ -0.2
LRFN3-202ENST00000585876 CABP5Q9NP86 173 aa13.83□□□□□ -0.2
LRFN3-202ENST00000585876 BTBD19C9JJ37 291 aa13.82□□□□□ -0.2
LRFN3-202ENST00000585876 ORC4O43929 436 aa13.82□□□□□ -0.2
LRFN3-202ENST00000585876 SLC3A2P08195 630 aaKnown RBP13.82□□□□□ -0.2
LRFN3-202ENST00000585876 AKR1B1P15121 316 aa13.82□□□□□ -0.2
LRFN3-202ENST00000585876 NT5C2P49902 561 aa13.82□□□□□ -0.2
LRFN3-202ENST00000585876 BACE1P56817 501 aa13.82□□□□□ -0.2
LRFN3-202ENST00000585876 PDE4BQ07343 736 aa13.82□□□□□ -0.2
LRFN3-202ENST00000585876 SPP2Q13103 211 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms