RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.12■■■□□ 2.09
TRAPPC8-213ENST00000584876 DBNLQ9UJU6 430 aaKnown RBP28.12■■■□□ 2.09
TRAPPC8-213ENST00000584876 PALD1Q9ULE6 856 aa28.12■■■□□ 2.09
TRAPPC8-213ENST00000584876 IGSF3O75054 1194 aa28.11■■■□□ 2.09
TRAPPC8-213ENST00000584876 GDF11O95390 407 aa28.11■■■□□ 2.09
TRAPPC8-213ENST00000584876 ITPRIPQ8IWB1 547 aa28.11■■■□□ 2.09
TRAPPC8-213ENST00000584876 TLR7Q9NYK1 1049 aaKnown RBP28.11■■■□□ 2.09
TRAPPC8-213ENST00000584876 MORF4L1Q9UBU8 362 aa28.11■■■□□ 2.09
TRAPPC8-213ENST00000584876 SAP30BPQ9UHR5 308 aaKnown RBP28.11■■■□□ 2.09
TRAPPC8-213ENST00000584876 RANBP2P49792 3224 aaKnown RBP28.11■■■□□ 2.09
TRAPPC8-213ENST00000584876 HLA-DOAP06340 250 aa28.1■■■□□ 2.09
TRAPPC8-213ENST00000584876 SHROOM1Q2M3G4 852 aaPredicted RBP28.1■■■□□ 2.09
TRAPPC8-213ENST00000584876 GINM1Q9NU53 330 aa28.1■■■□□ 2.09
TRAPPC8-213ENST00000584876 GJD2Q9UKL4 321 aa28.1■■■□□ 2.09
TRAPPC8-213ENST00000584876 NOP58Q9Y2X3 529 aaKnown RBP28.1■■■□□ 2.09
TRAPPC8-213ENST00000584876 C19orf81C9J6K1 198 aa28.09■■■□□ 2.09
TRAPPC8-213ENST00000584876 EVI5O60447 810 aa28.09■■■□□ 2.09
TRAPPC8-213ENST00000584876 CYP7A1P22680 504 aa28.09■■■□□ 2.09
TRAPPC8-213ENST00000584876 DYNLL1P63167 89 aaKnown RBP28.09■■■□□ 2.09
TRAPPC8-213ENST00000584876 CCDC8Q9H0W5 538 aaPredicted RBP28.09■■■□□ 2.09
TRAPPC8-213ENST00000584876 ZBTB21Q9ULJ3 1066 aa28.09■■■□□ 2.09
TRAPPC8-213ENST00000584876 USP17L10C9JJH3 530 aa28.08■■■□□ 2.09
TRAPPC8-213ENST00000584876 HOXA7P31268 230 aaPredicted RBP28.08■■■□□ 2.09
TRAPPC8-213ENST00000584876 PAWRQ96IZ0 340 aaKnown RBP28.08■■■□□ 2.09
TRAPPC8-213ENST00000584876 IDH1O75874 414 aaKnown RBP28.07■■■□□ 2.08
TRAPPC8-213ENST00000584876 HERVK_113P62684 666 aa28.07■■■□□ 2.08
TRAPPC8-213ENST00000584876 P2RX7Q99572 595 aaKnown RBP28.07■■■□□ 2.08
TRAPPC8-213ENST00000584876 PRO3102Q9H379 93 aa28.07■■■□□ 2.08
TRAPPC8-213ENST00000584876 SZT2Q5T011 3432 aa28.07■■■□□ 2.08
TRAPPC8-213ENST00000584876 RLBP1P12271 317 aa28.06■■■□□ 2.08
TRAPPC8-213ENST00000584876 TRIM32Q13049 653 aa28.06■■■□□ 2.08
TRAPPC8-213ENST00000584876 DIS3LQ8TF46 1054 aaKnown RBP28.06■■■□□ 2.08
TRAPPC8-213ENST00000584876 EAF2Q96CJ1 260 aaPredicted RBP28.06■■■□□ 2.08
TRAPPC8-213ENST00000584876 RPTORQ8N122 1335 aa28.06■■■□□ 2.08
TRAPPC8-213ENST00000584876 PEX10O60683 326 aa28.05■■■□□ 2.08
TRAPPC8-213ENST00000584876 HNRNPUQ00839 825 aaKnown RBP eCLIP28.05■■■□□ 2.08
TRAPPC8-213ENST00000584876 DDX60LQ5H9U9 1706 aaKnown RBP28.05■■■□□ 2.08
TRAPPC8-213ENST00000584876 NECAB2Q7Z6G3 386 aa28.05■■■□□ 2.08
TRAPPC8-213ENST00000584876 MIGA1Q8NAN2 632 aa28.05■■■□□ 2.08
TRAPPC8-213ENST00000584876 GPRC5AQ8NFJ5 357 aa28.05■■■□□ 2.08
TRAPPC8-213ENST00000584876 TXNRD2Q9NNW7 524 aa28.05■■■□□ 2.08
TRAPPC8-213ENST00000584876 HMX1Q9NP08 348 aaPredicted RBP28.05■■■□□ 2.08
TRAPPC8-213ENST00000584876 CYP2B6P20813 491 aa28.04■■■□□ 2.08
TRAPPC8-213ENST00000584876 ANKLE1Q8NAG6 615 aa28.04■■■□□ 2.08
TRAPPC8-213ENST00000584876 TRIB2Q92519 343 aa28.04■■■□□ 2.08
TRAPPC8-213ENST00000584876 USP5P45974 858 aa28.03■■■□□ 2.08
TRAPPC8-213ENST00000584876 CERS3Q8IU89 383 aa28.03■■■□□ 2.08
TRAPPC8-213ENST00000584876 MAGEB6Q8N7X4 407 aa28.03■■■□□ 2.08
TRAPPC8-213ENST00000584876 SOCS4Q8WXH5 440 aa28.03■■■□□ 2.08
TRAPPC8-213ENST00000584876 NUDT12Q9BQG2 462 aa28.03■■■□□ 2.08
TRAPPC8-213ENST00000584876 NDUFB9Q9Y6M9 179 aa28.03■■■□□ 2.08
TRAPPC8-213ENST00000584876 GH2P01242 217 aa28.02■■■□□ 2.08
TRAPPC8-213ENST00000584876 USP17L2Q6R6M4 530 aa28.02■■■□□ 2.08
TRAPPC8-213ENST00000584876 PDE3AQ14432 1141 aa28.01■■■□□ 2.07
TRAPPC8-213ENST00000584876 CEP85Q6P2H3 762 aa28.01■■■□□ 2.07
TRAPPC8-213ENST00000584876 GTF3C2Q8WUA4 911 aaPredicted RBP28.01■■■□□ 2.07
TRAPPC8-213ENST00000584876 EMILIN3Q9NT22 766 aa28.01■■■□□ 2.07
TRAPPC8-213ENST00000584876 RBPJLQ9UBG7 517 aa28.01■■■□□ 2.07
TRAPPC8-213ENST00000584876 NAV1Q8NEY1 1877 aa28.01■■■□□ 2.07
TRAPPC8-213ENST00000584876 MAPK4P31152 587 aa28■■■□□ 2.07
TRAPPC8-213ENST00000584876 ERVK-9P63128 1117 aa28■■■□□ 2.07
TRAPPC8-213ENST00000584876 ERVK-24P63145 666 aa28■■■□□ 2.07
TRAPPC8-213ENST00000584876 PAGR1Q9BTK6 254 aa28■■■□□ 2.07
TRAPPC8-213ENST00000584876 ANTXR1Q9H6X2 564 aa28■■■□□ 2.07
TRAPPC8-213ENST00000584876 PRKAR2AP13861 404 aaKnown RBP27.99■■■□□ 2.07
TRAPPC8-213ENST00000584876 MAP3K12Q12852 859 aa27.99■■■□□ 2.07
TRAPPC8-213ENST00000584876 AACSQ86V21 672 aa27.99■■■□□ 2.07
TRAPPC8-213ENST00000584876 ERC1Q8IUD2 1116 aa27.99■■■□□ 2.07
TRAPPC8-213ENST00000584876 CCAR1Q8IX12 1150 aaKnown RBP27.99■■■□□ 2.07
TRAPPC8-213ENST00000584876 FEZ1Q99689 392 aa27.99■■■□□ 2.07
TRAPPC8-213ENST00000584876 SERPINB13Q9UIV8 391 aa27.99■■■□□ 2.07
TRAPPC8-213ENST00000584876 EXOC6BQ9Y2D4 811 aa27.99■■■□□ 2.07
TRAPPC8-213ENST00000584876 XRCC5P13010 732 aaKnown RBP27.98■■■□□ 2.07
TRAPPC8-213ENST00000584876 ZYXQ15942 572 aaKnown RBP27.98■■■□□ 2.07
TRAPPC8-213ENST00000584876 Q3C1V9 767 aa27.98■■■□□ 2.07
TRAPPC8-213ENST00000584876 MAP3K21Q5TCX8 1036 aa27.98■■■□□ 2.07
TRAPPC8-213ENST00000584876 TATDN1Q6P1N9 297 aa27.98■■■□□ 2.07
TRAPPC8-213ENST00000584876 NBPF3Q9H094 633 aa27.98■■■□□ 2.07
TRAPPC8-213ENST00000584876 EHD4Q9H223 541 aa27.98■■■□□ 2.07
TRAPPC8-213ENST00000584876 PORCNQ9H237 461 aa27.98■■■□□ 2.07
TRAPPC8-213ENST00000584876 A0A1W2PPC1 479 aa27.97■■■□□ 2.07
TRAPPC8-213ENST00000584876 ZKSCAN1P17029 563 aaPredicted RBP27.97■■■□□ 2.07
TRAPPC8-213ENST00000584876 TMED8Q6PL24 325 aaPredicted RBP27.97■■■□□ 2.07
TRAPPC8-213ENST00000584876 GPR142Q7Z601 462 aa27.97■■■□□ 2.07
TRAPPC8-213ENST00000584876 TRMT44Q8IYL2 757 aaKnown RBP27.97■■■□□ 2.07
TRAPPC8-213ENST00000584876 C7orf61Q8IZ16 206 aa27.97■■■□□ 2.07
TRAPPC8-213ENST00000584876 C12orf42Q96LP6 360 aa27.97■■■□□ 2.07
TRAPPC8-213ENST00000584876 STAP2Q9UGK3 403 aa27.97■■■□□ 2.07
TRAPPC8-213ENST00000584876 MNX1P50219 401 aaPredicted RBP27.96■■■□□ 2.07
TRAPPC8-213ENST00000584876 TTC6Q86TZ1 520 aa27.96■■■□□ 2.07
TRAPPC8-213ENST00000584876 OGDHLQ9ULD0 1010 aa27.96■■■□□ 2.07
TRAPPC8-213ENST00000584876 RGS2P41220 211 aa27.95■■■□□ 2.06
TRAPPC8-213ENST00000584876 RAB3GAP1Q15042 981 aa27.95■■■□□ 2.06
TRAPPC8-213ENST00000584876 CERKLQ49MI3 558 aaPredicted RBP27.95■■■□□ 2.06
TRAPPC8-213ENST00000584876 POTEEQ6S8J3 1075 aa27.95■■■□□ 2.06
TRAPPC8-213ENST00000584876 PLEKHH3Q7Z736 793 aa27.95■■■□□ 2.06
TRAPPC8-213ENST00000584876 USP6NLQ92738 828 aa27.95■■■□□ 2.06
TRAPPC8-213ENST00000584876 C11orf49Q9H6J7 331 aa27.95■■■□□ 2.06
TRAPPC8-213ENST00000584876 CWC22Q9HCG8 908 aaKnown RBP27.95■■■□□ 2.06
TRAPPC8-213ENST00000584876 USP17L15C9J2P7 530 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms