RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 ZAP70P43403 619 aa20.32■□□□□ 0.84
CCDC57-219ENST00000584717 BACE1P56817 501 aa20.32■□□□□ 0.84
CCDC57-219ENST00000584717 PPP4CP60510 307 aa20.32■□□□□ 0.84
CCDC57-219ENST00000584717 ZKSCAN2Q63HK3 967 aa20.32■□□□□ 0.84
CCDC57-219ENST00000584717 SSH3Q8TE77 659 aa20.32■□□□□ 0.84
CCDC57-219ENST00000584717 PIH1D3Q9NQM4 214 aaKnown RBP20.32■□□□□ 0.84
CCDC57-219ENST00000584717 TMOD4Q9NZQ9 345 aa20.32■□□□□ 0.84
CCDC57-219ENST00000584717 MORF4L1Q9UBU8 362 aa20.32■□□□□ 0.84
CCDC57-219ENST00000584717 LAMA3Q16787 3333 aa20.32■□□□□ 0.84
CCDC57-219ENST00000584717 SURF6O75683 361 aaKnown RBP20.31■□□□□ 0.84
CCDC57-219ENST00000584717 CAPN2P17655 700 aa20.31■□□□□ 0.84
CCDC57-219ENST00000584717 DYNLL1P63167 89 aaKnown RBP20.31■□□□□ 0.84
CCDC57-219ENST00000584717 P2RX7Q99572 595 aaKnown RBP20.31■□□□□ 0.84
CCDC57-219ENST00000584717 TLR7Q9NYK1 1049 aaKnown RBP20.31■□□□□ 0.84
CCDC57-219ENST00000584717 ATP8B2P98198 1209 aa20.3■□□□□ 0.84
CCDC57-219ENST00000584717 NECAB2Q7Z6G3 386 aa20.3■□□□□ 0.84
CCDC57-219ENST00000584717 TXNRD2Q9NNW7 524 aa20.3■□□□□ 0.84
CCDC57-219ENST00000584717 ZBTB21Q9ULJ3 1066 aa20.3■□□□□ 0.84
CCDC57-219ENST00000584717 USP17L10C9JJH3 530 aa20.29■□□□□ 0.84
CCDC57-219ENST00000584717 HOXA7P31268 230 aaPredicted RBP20.29■□□□□ 0.84
CCDC57-219ENST00000584717 HERVK_113P62684 666 aa20.29■□□□□ 0.84
CCDC57-219ENST00000584717 METTL16Q86W50 562 aaKnown RBP20.29■□□□□ 0.84
CCDC57-219ENST00000584717 FOXP4Q8IVH2 680 aaPredicted RBP20.29■□□□□ 0.84
CCDC57-219ENST00000584717 TRIB2Q92519 343 aa20.29■□□□□ 0.84
CCDC57-219ENST00000584717 HMX1Q9NP08 348 aaPredicted RBP20.29■□□□□ 0.84
CCDC57-219ENST00000584717 DBNLQ9UJU6 430 aaKnown RBP20.29■□□□□ 0.84
CCDC57-219ENST00000584717 RPTORQ8N122 1335 aa20.28■□□□□ 0.84
CCDC57-219ENST00000584717 HLA-DOAP06340 250 aa20.28■□□□□ 0.84
CCDC57-219ENST00000584717 CYP2B6P20813 491 aa20.28■□□□□ 0.84
CCDC57-219ENST00000584717 CYP7A1P22680 504 aa20.28■□□□□ 0.84
CCDC57-219ENST00000584717 ZNF512BQ96KM6 892 aaPredicted RBP20.28■□□□□ 0.84
CCDC57-219ENST00000584717 CCDC8Q9H0W5 538 aaPredicted RBP20.28■□□□□ 0.84
CCDC57-219ENST00000584717 STAP2Q9UGK3 403 aa20.28■□□□□ 0.84
CCDC57-219ENST00000584717 DDX60LQ5H9U9 1706 aaKnown RBP20.27■□□□□ 0.84
CCDC57-219ENST00000584717 MYH1P12882 1939 aa20.27■□□□□ 0.84
CCDC57-219ENST00000584717 C19orf81C9J6K1 198 aa20.27■□□□□ 0.84
CCDC57-219ENST00000584717 C7orf61Q8IZ16 206 aa20.27■□□□□ 0.84
CCDC57-219ENST00000584717 ANKLE1Q8NAG6 615 aa20.27■□□□□ 0.84
CCDC57-219ENST00000584717 MIGA1Q8NAN2 632 aa20.27■□□□□ 0.84
CCDC57-219ENST00000584717 GPRC5AQ8NFJ5 357 aa20.27■□□□□ 0.84
CCDC57-219ENST00000584717 IDH1O75874 414 aaKnown RBP20.26■□□□□ 0.83
CCDC57-219ENST00000584717 ITPRIPQ8IWB1 547 aa20.26■□□□□ 0.83
CCDC57-219ENST00000584717 FTSJ3Q8IY81 847 aaKnown RBP20.26■□□□□ 0.83
CCDC57-219ENST00000584717 NUDT12Q9BQG2 462 aa20.26■□□□□ 0.83
CCDC57-219ENST00000584717 PAGR1Q9BTK6 254 aa20.26■□□□□ 0.83
CCDC57-219ENST00000584717 GINM1Q9NU53 330 aa20.26■□□□□ 0.83
CCDC57-219ENST00000584717 RBPJLQ9UBG7 517 aa20.26■□□□□ 0.83
CCDC57-219ENST00000584717 NOP58Q9Y2X3 529 aaKnown RBP20.26■□□□□ 0.83
CCDC57-219ENST00000584717 NDUFB9Q9Y6M9 179 aa20.26■□□□□ 0.83
CCDC57-219ENST00000584717 SOX1O00570 391 aaPredicted RBP20.25■□□□□ 0.83
CCDC57-219ENST00000584717 GH2P01242 217 aa20.25■□□□□ 0.83
CCDC57-219ENST00000584717 PRKAR2AP13861 404 aaKnown RBP20.25■□□□□ 0.83
CCDC57-219ENST00000584717 SOCS4Q8WXH5 440 aa20.25■□□□□ 0.83
CCDC57-219ENST00000584717 EAF2Q96CJ1 260 aaPredicted RBP20.25■□□□□ 0.83
CCDC57-219ENST00000584717 NBPF3Q9H094 633 aa20.25■□□□□ 0.83
CCDC57-219ENST00000584717 PORCNQ9H237 461 aa20.25■□□□□ 0.83
CCDC57-219ENST00000584717 EMILIN3Q9NT22 766 aa20.25■□□□□ 0.83
CCDC57-219ENST00000584717 ZMYND8Q9ULU4 1186 aaPredicted RBP20.25■□□□□ 0.83
CCDC57-219ENST00000584717 A0A1W2PPC1 479 aa20.24■□□□□ 0.83
CCDC57-219ENST00000584717 RLBP1P12271 317 aa20.24■□□□□ 0.83
CCDC57-219ENST00000584717 USP5P45974 858 aa20.24■□□□□ 0.83
CCDC57-219ENST00000584717 MNX1P50219 401 aaPredicted RBP20.24■□□□□ 0.83
CCDC57-219ENST00000584717 ERVK-9P63128 1117 aa20.24■□□□□ 0.83
CCDC57-219ENST00000584717 ERVK-24P63145 666 aa20.24■□□□□ 0.83
CCDC57-219ENST00000584717 PDE3AQ14432 1141 aa20.24■□□□□ 0.83
CCDC57-219ENST00000584717 ZYXQ15942 572 aaKnown RBP20.24■□□□□ 0.83
CCDC57-219ENST00000584717 Q3C1V9 767 aa20.24■□□□□ 0.83
CCDC57-219ENST00000584717 CCAR1Q8IX12 1150 aaKnown RBP20.24■□□□□ 0.83
CCDC57-219ENST00000584717 MAGEB6Q8N7X4 407 aa20.24■□□□□ 0.83
CCDC57-219ENST00000584717 ZKSCAN1P17029 563 aaPredicted RBP20.23■□□□□ 0.83
CCDC57-219ENST00000584717 MAPK4P31152 587 aa20.23■□□□□ 0.83
CCDC57-219ENST00000584717 MAP3K21Q5TCX8 1036 aa20.23■□□□□ 0.83
CCDC57-219ENST00000584717 USP17L2Q6R6M4 530 aa20.23■□□□□ 0.83
CCDC57-219ENST00000584717 LRCH3Q96II8 777 aa20.23■□□□□ 0.83
CCDC57-219ENST00000584717 FEZ1Q99689 392 aa20.23■□□□□ 0.83
CCDC57-219ENST00000584717 C11orf49Q9H6J7 331 aa20.23■□□□□ 0.83
CCDC57-219ENST00000584717 OGDHLQ9ULD0 1010 aa20.23■□□□□ 0.83
CCDC57-219ENST00000584717 IGSF3O75054 1194 aa20.22■□□□□ 0.83
CCDC57-219ENST00000584717 XRCC5P13010 732 aaKnown RBP20.22■□□□□ 0.83
CCDC57-219ENST00000584717 CCL14Q16627 93 aa20.22■□□□□ 0.83
CCDC57-219ENST00000584717 POTEEQ6S8J3 1075 aa20.22■□□□□ 0.83
CCDC57-219ENST00000584717 GPR142Q7Z601 462 aa20.22■□□□□ 0.83
CCDC57-219ENST00000584717 ANTXR1Q9H6X2 564 aa20.22■□□□□ 0.83
CCDC57-219ENST00000584717 SYN1P17600 705 aa20.21■□□□□ 0.83
CCDC57-219ENST00000584717 CACNB2Q08289 660 aaPredicted RBP20.21■□□□□ 0.83
CCDC57-219ENST00000584717 TATDN1Q6P1N9 297 aa20.21■□□□□ 0.83
CCDC57-219ENST00000584717 PLEKHH3Q7Z736 793 aa20.21■□□□□ 0.83
CCDC57-219ENST00000584717 GTF3C2Q8WUA4 911 aaPredicted RBP20.21■□□□□ 0.83
CCDC57-219ENST00000584717 USP6NLQ92738 828 aa20.21■□□□□ 0.83
CCDC57-219ENST00000584717 CWC22Q9HCG8 908 aaKnown RBP20.21■□□□□ 0.83
CCDC57-219ENST00000584717 COL6A3P12111 3177 aa20.21■□□□□ 0.83
CCDC57-219ENST00000584717 CCND3P30281 292 aaPredicted RBP20.2■□□□□ 0.82
CCDC57-219ENST00000584717 RGS2P41220 211 aa20.2■□□□□ 0.82
CCDC57-219ENST00000584717 RAB3GAP1Q15042 981 aa20.2■□□□□ 0.82
CCDC57-219ENST00000584717 MORN1Q5T089 497 aa20.2■□□□□ 0.82
CCDC57-219ENST00000584717 CEP85Q6P2H3 762 aa20.2■□□□□ 0.82
CCDC57-219ENST00000584717 TRMT44Q8IYL2 757 aaKnown RBP20.2■□□□□ 0.82
CCDC57-219ENST00000584717 GDF15Q99988 308 aa20.2■□□□□ 0.82
CCDC57-219ENST00000584717 SERPINB13Q9UIV8 391 aa20.2■□□□□ 0.82
CCDC57-219ENST00000584717 EXOC6BQ9Y2D4 811 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms