RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PTPRKQ15262 1439 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 TROVE2P10155 538 aaKnown RBP eCLIP14.48□□□□□ -0.09
RNF43-208ENST00000584437 SH2D4BQ5SQS7 431 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 NBPF14Q5TI25 921 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 KRT25Q7Z3Z0 450 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 BCAS4Q8TDM0 211 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 RABGGTAQ92696 567 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 NYXQ9GZU5 481 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 FAM114A2Q9NRY5 505 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 KLHL14Q9P2G3 628 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 V9GY48 417 aaPredicted RBP14.48□□□□□ -0.09
RNF43-208ENST00000584437 UGGT2Q9NYU1 1516 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 KRT15P19012 456 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 GCKP35557 465 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 TRIML1Q8N9V2 468 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 P3H4Q92791 437 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 FAM227BQ96M60 508 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 COL17A1Q9UMD9 1497 aaPredicted RBP14.48□□□□□ -0.09
RNF43-208ENST00000584437 TCP1P17987 556 aaKnown RBP14.48□□□□□ -0.09
RNF43-208ENST00000584437 CCT6BQ92526 530 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 CARD14Q9BXL6 1004 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 DENND2AQ9ULE3 1009 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 VGLL3A8MV65 326 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 STX2P32856 288 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 BIRC3Q13489 604 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 TTC6Q86TZ1 520 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 TSC1Q92574 1164 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 EXOC7Q9UPT5 735 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 RIMS2Q9UQ26 1411 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 LUC7L3O95232 432 aaKnown RBP14.47□□□□□ -0.09
RNF43-208ENST00000584437 SMTNP53814 917 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 GBP7Q8N8V2 638 aaPredicted RBP14.47□□□□□ -0.09
RNF43-208ENST00000584437 LDHBP07195 334 aaKnown RBP14.47□□□□□ -0.09
RNF43-208ENST00000584437 RFC1P35251 1148 aaPredicted RBP14.47□□□□□ -0.09
RNF43-208ENST00000584437 ADKP55263 362 aaKnown RBP14.47□□□□□ -0.09
RNF43-208ENST00000584437 TTLL12Q14166 644 aaPredicted RBP14.47□□□□□ -0.09
RNF43-208ENST00000584437 MAP7Q14244 749 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 PLS1Q14651 629 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 FAM212AQ96EL1 285 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 NIP7Q9Y221 180 aaKnown RBP eCLIP14.47□□□□□ -0.09
RNF43-208ENST00000584437 GNA14O95837 355 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 CDC25BP30305 580 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 RBM6P78332 1123 aaKnown RBP14.47□□□□□ -0.09
RNF43-208ENST00000584437 MYSM1Q5VVJ2 828 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 OTUD7BQ6GQQ9 843 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 UHRF1BP1Q6BDS2 1440 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 BCRP11274 1271 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 MUM1Q2TAK8 710 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 PPP1R21Q6ZMI0 780 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 DPH6Q7L8W6 267 aa14.47□□□□□ -0.09
RNF43-208ENST00000584437 CCNT1O60563 726 aaKnown RBP14.46□□□□□ -0.09
RNF43-208ENST00000584437 PLCH2O75038 1416 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 NONOQ15233 471 aaKnown RBP eCLIP14.46□□□□□ -0.09
RNF43-208ENST00000584437 PSMB7Q99436 277 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 LRWD1Q9UFC0 647 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 STK10O94804 968 aaKnown RBP14.46□□□□□ -0.09
RNF43-208ENST00000584437 KIFC2Q96AC6 838 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 DSCC1Q9BVC3 393 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 AMFRQ9UKV5 643 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 GPAA1O43292 621 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 G2E3Q7L622 706 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 DBNDD2Q9BQY9 259 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 RIPOR2Q9Y4F9 1068 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 TACC3Q9Y6A5 838 aa14.46□□□□□ -0.09
RNF43-208ENST00000584437 FANCAO15360 1455 aa14.46□□□□□ -0.1
RNF43-208ENST00000584437 TXNDC9O14530 226 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 JAK2O60674 1132 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 TRMT44Q8IYL2 757 aaKnown RBP14.45□□□□□ -0.1
RNF43-208ENST00000584437 RABGAP1Q9Y3P9 1069 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 PFKFB1P16118 471 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 LRMPQ12912 555 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 TMEM87AQ8NBN3 555 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 ZNF274Q96GC6 653 aaPredicted RBP14.45□□□□□ -0.1
RNF43-208ENST00000584437 BLMP54132 1417 aaPredicted RBP14.45□□□□□ -0.1
RNF43-208ENST00000584437 HGSO14964 777 aaPredicted RBP14.45□□□□□ -0.1
RNF43-208ENST00000584437 TXKP42681 527 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 TYW1BQ6NUM6 668 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 RRAGAQ7L523 313 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 DZIP3Q86Y13 1208 aaKnown RBP14.45□□□□□ -0.1
RNF43-208ENST00000584437 RNF168Q8IYW5 571 aaPredicted RBP14.45□□□□□ -0.1
RNF43-208ENST00000584437 MRRFQ96E11 262 aaKnown RBP14.45□□□□□ -0.1
RNF43-208ENST00000584437 DCAF5Q96JK2 942 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 LZTS2Q9BRK4 669 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 DENND4BO75064 1496 aaPredicted RBP14.45□□□□□ -0.1
RNF43-208ENST00000584437 PPM1FP49593 454 aaPredicted RBP14.45□□□□□ -0.1
RNF43-208ENST00000584437 DNM2P50570 870 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 PNOCQ13519 176 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 GEN1Q17RS7 908 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 HERC4Q5GLZ8 1057 aaPredicted RBP14.45□□□□□ -0.1
RNF43-208ENST00000584437 AKNAD1Q5T1N1 836 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 GRIN2AQ12879 1464 aa14.45□□□□□ -0.1
RNF43-208ENST00000584437 CRCPO75575 148 aa14.44□□□□□ -0.1
RNF43-208ENST00000584437 LIG3P49916 1009 aa14.44□□□□□ -0.1
RNF43-208ENST00000584437 ME3Q16798 604 aa14.44□□□□□ -0.1
RNF43-208ENST00000584437 SNX29Q8TEQ0 813 aa14.44□□□□□ -0.1
RNF43-208ENST00000584437 METTL22Q9BUU2 404 aaPredicted RBP14.44□□□□□ -0.1
RNF43-208ENST00000584437 SERTAD1Q9UHV2 236 aa14.44□□□□□ -0.1
RNF43-208ENST00000584437 FAN1Q9Y2M0 1017 aa14.44□□□□□ -0.1
RNF43-208ENST00000584437 LONRF2Q1L5Z9 754 aa14.44□□□□□ -0.1
RNF43-208ENST00000584437 TTC16Q8NEE8 873 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms