RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 SSH3Q8TE77 659 aa16.54■□□□□ 0.24
CCDC57-218ENST00000583593 TRIB2Q92519 343 aa16.54■□□□□ 0.24
CCDC57-218ENST00000583593 TXNRD2Q9NNW7 524 aa16.54■□□□□ 0.24
CCDC57-218ENST00000583593 STAP2Q9UGK3 403 aa16.54■□□□□ 0.24
CCDC57-218ENST00000583593 PALD1Q9ULE6 856 aa16.54■□□□□ 0.24
CCDC57-218ENST00000583593 SOX1O00570 391 aaPredicted RBP16.53■□□□□ 0.24
CCDC57-218ENST00000583593 PLCG2P16885 1265 aa16.53■□□□□ 0.24
CCDC57-218ENST00000583593 ZAP70P43403 619 aa16.53■□□□□ 0.24
CCDC57-218ENST00000583593 ATP8B2P98198 1209 aa16.53■□□□□ 0.24
CCDC57-218ENST00000583593 NECAB2Q7Z6G3 386 aa16.53■□□□□ 0.24
CCDC57-218ENST00000583593 FOXP4Q8IVH2 680 aaPredicted RBP16.53■□□□□ 0.24
CCDC57-218ENST00000583593 ANKLE1Q8NAG6 615 aa16.53■□□□□ 0.24
CCDC57-218ENST00000583593 ZNF512BQ96KM6 892 aaPredicted RBP16.53■□□□□ 0.24
CCDC57-218ENST00000583593 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
CCDC57-218ENST00000583593 PIH1D3Q9NQM4 214 aaKnown RBP16.53■□□□□ 0.24
CCDC57-218ENST00000583593 DDX60LQ5H9U9 1706 aaKnown RBP16.53■□□□□ 0.24
CCDC57-218ENST00000583593 A0A1W2PPC1 479 aa16.52■□□□□ 0.24
CCDC57-218ENST00000583593 USP17L10C9JJH3 530 aa16.52■□□□□ 0.24
CCDC57-218ENST00000583593 GDF11O95390 407 aa16.52■□□□□ 0.24
CCDC57-218ENST00000583593 CYP2B6P20813 491 aa16.52■□□□□ 0.24
CCDC57-218ENST00000583593 HERVK_113P62684 666 aa16.52■□□□□ 0.24
CCDC57-218ENST00000583593 DYNLL1P63167 89 aaKnown RBP16.52■□□□□ 0.24
CCDC57-218ENST00000583593 Q3C1V9 767 aa16.52■□□□□ 0.24
CCDC57-218ENST00000583593 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.24
CCDC57-218ENST00000583593 MAP3K21Q5TCX8 1036 aa16.52■□□□□ 0.24
CCDC57-218ENST00000583593 HMX1Q9NP08 348 aaPredicted RBP16.52■□□□□ 0.24
CCDC57-218ENST00000583593 TLR7Q9NYK1 1049 aaKnown RBP16.52■□□□□ 0.24
CCDC57-218ENST00000583593 RBPJLQ9UBG7 517 aa16.52■□□□□ 0.24
CCDC57-218ENST00000583593 C19orf81C9J6K1 198 aa16.51■□□□□ 0.23
CCDC57-218ENST00000583593 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
CCDC57-218ENST00000583593 GDF15Q99988 308 aa16.51■□□□□ 0.23
CCDC57-218ENST00000583593 C1orf115Q9H7X2 142 aa16.51■□□□□ 0.23
CCDC57-218ENST00000583593 TMOD4Q9NZQ9 345 aa16.51■□□□□ 0.23
CCDC57-218ENST00000583593 SAP30BPQ9UHR5 308 aaKnown RBP16.51■□□□□ 0.23
CCDC57-218ENST00000583593 DBNLQ9UJU6 430 aaKnown RBP16.51■□□□□ 0.23
CCDC57-218ENST00000583593 OGDHLQ9ULD0 1010 aa16.51■□□□□ 0.23
CCDC57-218ENST00000583593 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
CCDC57-218ENST00000583593 MYH1P12882 1939 aa16.51■□□□□ 0.23
CCDC57-218ENST00000583593 SURF6O75683 361 aaKnown RBP16.5■□□□□ 0.23
CCDC57-218ENST00000583593 ZKSCAN2Q63HK3 967 aa16.5■□□□□ 0.23
CCDC57-218ENST00000583593 CRACR2BQ8N4Y2 399 aaPredicted RBP16.5■□□□□ 0.23
CCDC57-218ENST00000583593 GPRC5AQ8NFJ5 357 aa16.5■□□□□ 0.23
CCDC57-218ENST00000583593 USP6NLQ92738 828 aa16.5■□□□□ 0.23
CCDC57-218ENST00000583593 LRCH3Q96II8 777 aa16.5■□□□□ 0.23
CCDC57-218ENST00000583593 PORCNQ9H237 461 aa16.5■□□□□ 0.23
CCDC57-218ENST00000583593 EMILIN3Q9NT22 766 aa16.5■□□□□ 0.23
CCDC57-218ENST00000583593 GINM1Q9NU53 330 aa16.5■□□□□ 0.23
CCDC57-218ENST00000583593 NOP58Q9Y2X3 529 aaKnown RBP16.5■□□□□ 0.23
CCDC57-218ENST00000583593 IGSF3O75054 1194 aa16.49■□□□□ 0.23
CCDC57-218ENST00000583593 XRCC5P13010 732 aaKnown RBP16.49■□□□□ 0.23
CCDC57-218ENST00000583593 EAF2Q96CJ1 260 aaPredicted RBP16.49■□□□□ 0.23
CCDC57-218ENST00000583593 NUDT12Q9BQG2 462 aa16.49■□□□□ 0.23
CCDC57-218ENST00000583593 NBPF3Q9H094 633 aa16.49■□□□□ 0.23
CCDC57-218ENST00000583593 CCDC8Q9H0W5 538 aaPredicted RBP16.49■□□□□ 0.23
CCDC57-218ENST00000583593 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
CCDC57-218ENST00000583593 CYP7A1P22680 504 aa16.48■□□□□ 0.23
CCDC57-218ENST00000583593 BMP8BP34820 402 aa16.48■□□□□ 0.23
CCDC57-218ENST00000583593 ERVK-9P63128 1117 aa16.48■□□□□ 0.23
CCDC57-218ENST00000583593 ERVK-24P63145 666 aa16.48■□□□□ 0.23
CCDC57-218ENST00000583593 OS9Q13438 667 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-218ENST00000583593 C7orf61Q8IZ16 206 aa16.48■□□□□ 0.23
CCDC57-218ENST00000583593 ZMYND8Q9ULU4 1186 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-218ENST00000583593 NDUFB9Q9Y6M9 179 aa16.48■□□□□ 0.23
CCDC57-218ENST00000583593 DNAH12Q6ZR08 3092 aa16.48■□□□□ 0.23
CCDC57-218ENST00000583593 PFASO15067 1338 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 GH2P01242 217 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 RLBP1P12271 317 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 CACNB2Q08289 660 aaPredicted RBP16.47■□□□□ 0.23
CCDC57-218ENST00000583593 CCL14Q16627 93 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 MORN1Q5T089 497 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 TATDN1Q6P1N9 297 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 GPR142Q7Z601 462 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 MIGA1Q8NAN2 632 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 SOCS4Q8WXH5 440 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 TRIM34Q9BYJ4 488 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 C11orf49Q9H6J7 331 aa16.47■□□□□ 0.23
CCDC57-218ENST00000583593 CNMDO75829 334 aa16.46■□□□□ 0.23
CCDC57-218ENST00000583593 MAPK4P31152 587 aa16.46■□□□□ 0.23
CCDC57-218ENST00000583593 LHX8Q68G74 356 aa16.46■□□□□ 0.23
CCDC57-218ENST00000583593 C12orf42Q96LP6 360 aa16.46■□□□□ 0.23
CCDC57-218ENST00000583593 PAGR1Q9BTK6 254 aa16.46■□□□□ 0.23
CCDC57-218ENST00000583593 ANTXR1Q9H6X2 564 aa16.46■□□□□ 0.23
CCDC57-218ENST00000583593 IDH1O75874 414 aaKnown RBP16.45■□□□□ 0.22
CCDC57-218ENST00000583593 COL6A1P12109 1028 aa16.45■□□□□ 0.22
CCDC57-218ENST00000583593 SYN1P17600 705 aa16.45■□□□□ 0.22
CCDC57-218ENST00000583593 CCND3P30281 292 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-218ENST00000583593 PLEKHH3Q7Z736 793 aa16.45■□□□□ 0.22
CCDC57-218ENST00000583593 MAGEB6Q8N7X4 407 aa16.45■□□□□ 0.22
CCDC57-218ENST00000583593 FRMPD3Q5JV73 1810 aa16.45■□□□□ 0.22
CCDC57-218ENST00000583593 ZKSCAN1P17029 563 aaPredicted RBP16.44■□□□□ 0.22
CCDC57-218ENST00000583593 PDE3AQ14432 1141 aa16.44■□□□□ 0.22
CCDC57-218ENST00000583593 ZYXQ15942 572 aaKnown RBP16.44■□□□□ 0.22
CCDC57-218ENST00000583593 TRMT44Q8IYL2 757 aaKnown RBP16.44■□□□□ 0.22
CCDC57-218ENST00000583593 GTF3C2Q8WUA4 911 aaPredicted RBP16.44■□□□□ 0.22
CCDC57-218ENST00000583593 EHD4Q9H223 541 aa16.44■□□□□ 0.22
CCDC57-218ENST00000583593 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
CCDC57-218ENST00000583593 A0A0C4DFX4 3053 aa16.44■□□□□ 0.22
CCDC57-218ENST00000583593 USP17L15C9J2P7 530 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms