RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 SLKQ9H2G2 1235 aaPredicted RBP17.19■□□□□ 0.34
SENP3-208ENST00000583277 KLF18A0A0U1RQI7 1052 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 DDTLA6NHG4 134 aaPredicted RBP17.19■□□□□ 0.34
SENP3-208ENST00000583277 PFKFB2O60825 505 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 DDNO94850 711 aaPredicted RBP17.19■□□□□ 0.34
SENP3-208ENST00000583277 TFAP4Q01664 338 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 NFXL1Q6ZNB6 911 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 SH3BP5LQ7L8J4 393 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 SPRYD3Q8NCJ5 442 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 GTF3C6Q969F1 213 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 CSRNP1Q96S65 589 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 CWC22Q9HCG8 908 aaKnown RBP17.19■□□□□ 0.34
SENP3-208ENST00000583277 GPHNQ9NQX3 736 aaPredicted RBP17.19■□□□□ 0.34
SENP3-208ENST00000583277 TCP11L1Q9NUJ3 509 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 GREB1LQ9C091 1923 aaPredicted RBP17.18■□□□□ 0.34
SENP3-208ENST00000583277 CCDC69A6NI79 296 aa17.18■□□□□ 0.34
SENP3-208ENST00000583277 GOLGA8BA8MQT2 603 aa17.18■□□□□ 0.34
SENP3-208ENST00000583277 EGFRP00533 1210 aa17.18■□□□□ 0.34
SENP3-208ENST00000583277 RCAN1P53805 252 aa17.18■□□□□ 0.34
SENP3-208ENST00000583277 SEC23AQ15436 765 aa17.18■□□□□ 0.34
SENP3-208ENST00000583277 FAM47AQ5JRC9 791 aa17.18■□□□□ 0.34
SENP3-208ENST00000583277 METTL16Q86W50 562 aaKnown RBP17.18■□□□□ 0.34
SENP3-208ENST00000583277 CCDC83Q8IWF9 413 aa17.18■□□□□ 0.34
SENP3-208ENST00000583277 ENAHQ8N8S7 591 aaPredicted RBP17.18■□□□□ 0.34
SENP3-208ENST00000583277 L3MBTL3Q96JM7 780 aaPredicted RBP17.18■□□□□ 0.34
SENP3-208ENST00000583277 ZKSCAN3Q9BRR0 538 aa17.18■□□□□ 0.34
SENP3-208ENST00000583277 HERC5Q9UII4 1024 aaKnown RBP17.18■□□□□ 0.34
SENP3-208ENST00000583277 NAP1L2Q9ULW6 460 aaPredicted RBP17.18■□□□□ 0.34
SENP3-208ENST00000583277 SCN4AP35499 1836 aa17.18■□□□□ 0.34
SENP3-208ENST00000583277 PDIA3P30101 505 aaKnown RBP17.17■□□□□ 0.34
SENP3-208ENST00000583277 IFIT1BQ5T764 474 aaKnown RBP17.17■□□□□ 0.34
SENP3-208ENST00000583277 SYNE3Q6ZMZ3 975 aa17.17■□□□□ 0.34
SENP3-208ENST00000583277 APOBEC3FQ8IUX4 373 aaKnown RBP17.17■□□□□ 0.34
SENP3-208ENST00000583277 CCDC17Q96LX7 622 aa17.17■□□□□ 0.34
SENP3-208ENST00000583277 ADARB2Q9NS39 739 aaKnown RBP17.17■□□□□ 0.34
SENP3-208ENST00000583277 SLC12A7Q9Y666 1083 aa17.17■□□□□ 0.34
SENP3-208ENST00000583277 SHMT1P34896 483 aa17.16■□□□□ 0.34
SENP3-208ENST00000583277 EPS15P42566 896 aa17.16■□□□□ 0.34
SENP3-208ENST00000583277 APOA5Q6Q788 366 aa17.16■□□□□ 0.34
SENP3-208ENST00000583277 NECAB1Q8N987 351 aa17.16■□□□□ 0.34
SENP3-208ENST00000583277 NEDD1Q8NHV4 660 aa17.16■□□□□ 0.34
SENP3-208ENST00000583277 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
SENP3-208ENST00000583277 BRPF3Q9ULD4 1205 aa17.16■□□□□ 0.34
SENP3-208ENST00000583277 CIZ1Q9ULV3 898 aaPredicted RBP17.16■□□□□ 0.34
SENP3-208ENST00000583277 NID2Q14112 1375 aa17.16■□□□□ 0.34
SENP3-208ENST00000583277 ZBTB43O43298 467 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 DHX16O60231 1041 aaKnown RBP17.15■□□□□ 0.34
SENP3-208ENST00000583277 STK3Q13188 491 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 PPP4R3BQ5MIZ7 849 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 DGKHQ86XP1 1220 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 TRPM4Q8TD43 1214 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 LLPHQ9BRT6 129 aaKnown RBP17.15■□□□□ 0.34
SENP3-208ENST00000583277 HACL1Q9UJ83 578 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 GLTPD2A6NH11 291 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 METAP2P50579 478 aaKnown RBP eCLIP17.15■□□□□ 0.34
SENP3-208ENST00000583277 ST3GAL1Q11201 340 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 SCRN1Q12765 414 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 RASA3Q14644 834 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 ANKS1AQ92625 1134 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 TMEM39BQ9GZU3 492 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 DNAJC18Q9H819 358 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 SMC3Q9UQE7 1217 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 PITPNM2Q9BZ72 1349 aa17.15■□□□□ 0.34
SENP3-208ENST00000583277 TBC1D12O60347 775 aa17.14■□□□□ 0.33
SENP3-208ENST00000583277 DDAH1O94760 285 aa17.14■□□□□ 0.33
SENP3-208ENST00000583277 DDIT3P35638 169 aa17.14■□□□□ 0.33
SENP3-208ENST00000583277 TATDN1Q6P1N9 297 aa17.14■□□□□ 0.33
SENP3-208ENST00000583277 CATIPQ7Z7H3 387 aa17.14■□□□□ 0.33
SENP3-208ENST00000583277 ZNF654Q8IZM8 581 aa17.14■□□□□ 0.33
SENP3-208ENST00000583277 SENP2Q9HC62 589 aa17.14■□□□□ 0.33
SENP3-208ENST00000583277 HPS5Q9UPZ3 1129 aa17.14■□□□□ 0.33
SENP3-208ENST00000583277 PPP2R3BQ9Y5P8 575 aa17.14■□□□□ 0.33
SENP3-208ENST00000583277 WDR90Q96KV7 1748 aa17.14■□□□□ 0.33
SENP3-208ENST00000583277 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
SENP3-208ENST00000583277 NMT2O60551 498 aa17.13■□□□□ 0.33
SENP3-208ENST00000583277 CALM1P0DP23 149 aa17.13■□□□□ 0.33
SENP3-208ENST00000583277 CALM2P0DP24 149 aa17.13■□□□□ 0.33
SENP3-208ENST00000583277 CALM3P0DP25 149 aa17.13■□□□□ 0.33
SENP3-208ENST00000583277 PPP2R5BQ15173 497 aa17.13■□□□□ 0.33
SENP3-208ENST00000583277 CERKLQ49MI3 558 aaPredicted RBP17.13■□□□□ 0.33
SENP3-208ENST00000583277 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
SENP3-208ENST00000583277 MICU3Q86XE3 530 aa17.13■□□□□ 0.33
SENP3-208ENST00000583277 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.13■□□□□ 0.33
SENP3-208ENST00000583277 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
SENP3-208ENST00000583277 GGA3Q9NZ52 723 aa17.13■□□□□ 0.33
SENP3-208ENST00000583277 CHMP5Q9NZZ3 219 aa17.13■□□□□ 0.33
SENP3-208ENST00000583277 CCDC196A0A1B0GTZ2 297 aa17.12■□□□□ 0.33
SENP3-208ENST00000583277 IQCA1LA6NCM1 817 aa17.12■□□□□ 0.33
SENP3-208ENST00000583277 GOLGA8AA7E2F4 631 aa17.12■□□□□ 0.33
SENP3-208ENST00000583277 AKR1B1P15121 316 aa17.12■□□□□ 0.33
SENP3-208ENST00000583277 RCSD1Q6JBY9 416 aa17.12■□□□□ 0.33
SENP3-208ENST00000583277 CPLX2Q6PUV4 134 aaKnown RBP17.12■□□□□ 0.33
SENP3-208ENST00000583277 HOOK2Q96ED9 719 aa17.12■□□□□ 0.33
SENP3-208ENST00000583277 DEFB129Q9H1M3 183 aa17.12■□□□□ 0.33
SENP3-208ENST00000583277 KAT14Q9H8E8 782 aa17.12■□□□□ 0.33
SENP3-208ENST00000583277 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
SENP3-208ENST00000583277 MYH4Q9Y623 1939 aa17.12■□□□□ 0.33
SENP3-208ENST00000583277 ASTN2O75129 1339 aaPredicted RBP17.11■□□□□ 0.33
SENP3-208ENST00000583277 CPLX1O14810 134 aa17.11■□□□□ 0.33
SENP3-208ENST00000583277 CDKL5O76039 1030 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms