RNA–Protein interactions for RNA: ENST00000583117.1

LINC00200-202, long intergenic non-protein coding RNA 200, humanhuman

TSL 3

Gene LINC00200, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00200-202ENST00000583117 CERKLQ49MI3 558 aaPredicted RBP21.58■■□□□ 1.05
LINC00200-202ENST00000583117 IFNL1Q8IU54 200 aa21.58■■□□□ 1.05
LINC00200-202ENST00000583117 IFNL3Q8IZI9 196 aa21.58■■□□□ 1.05
LINC00200-202ENST00000583117 AS3MTQ9HBK9 375 aa21.58■■□□□ 1.05
LINC00200-202ENST00000583117 RNF186Q9NXI6 227 aa21.58■■□□□ 1.05
LINC00200-202ENST00000583117 USP17L5A8MUK1 530 aa21.57■■□□□ 1.04
LINC00200-202ENST00000583117 CYP2D6P10635 497 aa21.57■■□□□ 1.04
LINC00200-202ENST00000583117 SHMT1P34896 483 aa21.57■■□□□ 1.04
LINC00200-202ENST00000583117 RRP1BQ14684 758 aaKnown RBP21.57■■□□□ 1.04
LINC00200-202ENST00000583117 NAPBQ9H115 298 aa21.57■■□□□ 1.04
LINC00200-202ENST00000583117 EPB41L4AQ9HCS5 686 aaPredicted RBP21.57■■□□□ 1.04
LINC00200-202ENST00000583117 AFG3L2Q9Y4W6 797 aa21.57■■□□□ 1.04
LINC00200-202ENST00000583117 TRPA1O75762 1119 aa21.56■■□□□ 1.04
LINC00200-202ENST00000583117 CCDC129Q6ZRS4 1044 aa21.56■■□□□ 1.04
LINC00200-202ENST00000583117 C16orf86Q6ZW13 317 aa21.56■■□□□ 1.04
LINC00200-202ENST00000583117 ZCCHC17Q9NP64 241 aaKnown RBP21.56■■□□□ 1.04
LINC00200-202ENST00000583117 CABP5Q9NP86 173 aa21.56■■□□□ 1.04
LINC00200-202ENST00000583117 ZBTB21Q9ULJ3 1066 aa21.56■■□□□ 1.04
LINC00200-202ENST00000583117 CCDC171Q6TFL3 1326 aa21.55■■□□□ 1.04
LINC00200-202ENST00000583117 PHIPQ8WWQ0 1821 aa21.55■■□□□ 1.04
LINC00200-202ENST00000583117 PCNTO95613 3336 aa21.55■■□□□ 1.04
LINC00200-202ENST00000583117 GDF11O95390 407 aa21.55■■□□□ 1.04
LINC00200-202ENST00000583117 ABCB5Q2M3G0 1257 aa21.55■■□□□ 1.04
LINC00200-202ENST00000583117 CWC27Q6UX04 472 aaKnown RBP21.55■■□□□ 1.04
LINC00200-202ENST00000583117 BRI3BPQ8WY22 251 aa21.55■■□□□ 1.04
LINC00200-202ENST00000583117 CFHR5Q9BXR6 569 aa21.55■■□□□ 1.04
LINC00200-202ENST00000583117 ROBO3Q96MS0 1386 aa21.54■■□□□ 1.04
LINC00200-202ENST00000583117 CYP2D7A0A087X1C5 515 aa21.54■■□□□ 1.04
LINC00200-202ENST00000583117 MINDY4BA8MYZ0 360 aa21.54■■□□□ 1.04
LINC00200-202ENST00000583117 IGF2BP3O00425 579 aaKnown RBP eCLIP21.54■■□□□ 1.04
LINC00200-202ENST00000583117 FASTKD5Q7L8L6 764 aaKnown RBP21.54■■□□□ 1.04
LINC00200-202ENST00000583117 ZNF280CQ8ND82 737 aa21.54■■□□□ 1.04
LINC00200-202ENST00000583117 DYNLL2Q96FJ2 89 aa21.54■■□□□ 1.04
LINC00200-202ENST00000583117 CCDC17Q96LX7 622 aa21.54■■□□□ 1.04
LINC00200-202ENST00000583117 WDR18Q9BV38 432 aa21.54■■□□□ 1.04
LINC00200-202ENST00000583117 ZNF287Q9HBT7 754 aa21.54■■□□□ 1.04
LINC00200-202ENST00000583117 MYH8P13535 1937 aa21.54■■□□□ 1.04
LINC00200-202ENST00000583117 A0A0G2JLL6 359 aaPredicted RBP21.53■■□□□ 1.04
LINC00200-202ENST00000583117 GH2P01242 217 aa21.53■■□□□ 1.04
LINC00200-202ENST00000583117 SLC3A2P08195 630 aaKnown RBP21.53■■□□□ 1.04
LINC00200-202ENST00000583117 HSPA8P11142 646 aaKnown RBP21.53■■□□□ 1.04
LINC00200-202ENST00000583117 CDK8P49336 464 aa21.53■■□□□ 1.04
LINC00200-202ENST00000583117 EVX2Q03828 476 aa21.53■■□□□ 1.04
LINC00200-202ENST00000583117 ALX1Q15699 326 aa21.53■■□□□ 1.04
LINC00200-202ENST00000583117 PRRT2Q7Z6L0 340 aaPredicted RBP21.53■■□□□ 1.04
LINC00200-202ENST00000583117 RUFY2Q8WXA3 655 aa21.53■■□□□ 1.04
LINC00200-202ENST00000583117 PTPN18Q99952 460 aa21.53■■□□□ 1.04
LINC00200-202ENST00000583117 TRIM75PA6NK02 468 aa21.52■■□□□ 1.04
LINC00200-202ENST00000583117 SPP2Q13103 211 aa21.52■■□□□ 1.04
LINC00200-202ENST00000583117 ZNF589Q86UQ0 364 aaPredicted RBP21.52■■□□□ 1.04
LINC00200-202ENST00000583117 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.52■■□□□ 1.04
LINC00200-202ENST00000583117 ZMYM6O95789 1325 aa21.52■■□□□ 1.03
LINC00200-202ENST00000583117 RAD50Q92878 1312 aa21.52■■□□□ 1.03
LINC00200-202ENST00000583117 FOXP2O15409 715 aa21.51■■□□□ 1.03
LINC00200-202ENST00000583117 HSPD1P10809 573 aaKnown RBP21.51■■□□□ 1.03
LINC00200-202ENST00000583117 JAG1P78504 1218 aa21.51■■□□□ 1.03
LINC00200-202ENST00000583117 VPS53Q5VIR6 699 aa21.51■■□□□ 1.03
LINC00200-202ENST00000583117 ANKRD23Q86SG2 305 aa21.51■■□□□ 1.03
LINC00200-202ENST00000583117 CCDC84Q86UT8 332 aaPredicted RBP21.51■■□□□ 1.03
LINC00200-202ENST00000583117 SLC44A5Q8NCS7 719 aa21.51■■□□□ 1.03
LINC00200-202ENST00000583117 PRDM10Q9NQV6 1147 aa21.51■■□□□ 1.03
LINC00200-202ENST00000583117 C19orf81C9J6K1 198 aa21.5■■□□□ 1.03
LINC00200-202ENST00000583117 BTBD19C9JJ37 291 aa21.5■■□□□ 1.03
LINC00200-202ENST00000583117 MPHOSPH10O00566 681 aaKnown RBP21.5■■□□□ 1.03
LINC00200-202ENST00000583117 LBX1P52954 281 aa21.5■■□□□ 1.03
LINC00200-202ENST00000583117 PPARAQ07869 468 aa21.5■■□□□ 1.03
LINC00200-202ENST00000583117 RAB3GAP1Q15042 981 aa21.5■■□□□ 1.03
LINC00200-202ENST00000583117 NOM1Q5C9Z4 860 aaKnown RBP21.5■■□□□ 1.03
LINC00200-202ENST00000583117 BMP2KLQ5H9B9 411 aa21.5■■□□□ 1.03
LINC00200-202ENST00000583117 TMEM179Q6ZVK1 233 aa21.5■■□□□ 1.03
LINC00200-202ENST00000583117 PROCA1Q8NCQ7 364 aaPredicted RBP21.5■■□□□ 1.03
LINC00200-202ENST00000583117 MKNK2Q9HBH9 465 aa21.5■■□□□ 1.03
LINC00200-202ENST00000583117 TSKSQ9UJT2 592 aa21.5■■□□□ 1.03
LINC00200-202ENST00000583117 PTPRFP10586 1907 aa21.5■■□□□ 1.03
LINC00200-202ENST00000583117 USP17L10C9JJH3 530 aa21.49■■□□□ 1.03
LINC00200-202ENST00000583117 CHMLP26374 656 aa21.49■■□□□ 1.03
LINC00200-202ENST00000583117 BACE1P56817 501 aa21.49■■□□□ 1.03
LINC00200-202ENST00000583117 PDE4BQ07343 736 aa21.49■■□□□ 1.03
LINC00200-202ENST00000583117 MOGSQ13724 837 aa21.49■■□□□ 1.03
LINC00200-202ENST00000583117 SH3D19Q5HYK7 790 aa21.49■■□□□ 1.03
LINC00200-202ENST00000583117 FAM43AQ8N2R8 423 aa21.49■■□□□ 1.03
LINC00200-202ENST00000583117 SMIM22K7EJ46 135 aa21.48■■□□□ 1.03
LINC00200-202ENST00000583117 TBC1D8O95759 1140 aa21.48■■□□□ 1.03
LINC00200-202ENST00000583117 FGAP02671 866 aa21.48■■□□□ 1.03
LINC00200-202ENST00000583117 TAF1CQ15572 869 aaPredicted RBP21.48■■□□□ 1.03
LINC00200-202ENST00000583117 SHROOM1Q2M3G4 852 aaPredicted RBP21.48■■□□□ 1.03
LINC00200-202ENST00000583117 GADL1Q6ZQY3 521 aa21.48■■□□□ 1.03
LINC00200-202ENST00000583117 ZFYVE28Q9HCC9 887 aa21.48■■□□□ 1.03
LINC00200-202ENST00000583117 ANAPC4Q9UJX5 808 aa21.48■■□□□ 1.03
LINC00200-202ENST00000583117 SLC45A1Q9Y2W3 748 aa21.48■■□□□ 1.03
LINC00200-202ENST00000583117 PDHXO00330 501 aa21.47■■□□□ 1.03
LINC00200-202ENST00000583117 MTMR2Q13614 643 aa21.47■■□□□ 1.03
LINC00200-202ENST00000583117 DSCC1Q9BVC3 393 aa21.47■■□□□ 1.03
LINC00200-202ENST00000583117 TMOD4Q9NZQ9 345 aa21.47■■□□□ 1.03
LINC00200-202ENST00000583117 AKR1B1P15121 316 aa21.46■■□□□ 1.03
LINC00200-202ENST00000583117 RASA1P20936 1047 aa21.46■■□□□ 1.03
LINC00200-202ENST00000583117 GUCY1A2P33402 732 aa21.46■■□□□ 1.03
LINC00200-202ENST00000583117 USP14P54578 494 aa21.46■■□□□ 1.03
LINC00200-202ENST00000583117 HMGCS2P54868 508 aa21.46■■□□□ 1.03
LINC00200-202ENST00000583117 PABPC4Q13310 644 aaKnown RBP eCLIP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms