RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 SRRDQ9UH36 339 aa7.9□□□□□ -1.14
NDEL1-216ENST00000583066 EXOC6BQ9Y2D4 811 aa7.9□□□□□ -1.14
NDEL1-216ENST00000583066 COL1A1P02452 1464 aaPredicted RBP7.89□□□□□ -1.15
NDEL1-216ENST00000583066 CCL15-CCL14A0A0B4J2E2 113 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 PNMA6EA0A0J9YXQ4 647 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 PI4KAP2A4QPH2 592 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 SRGAP3O43295 1099 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 SMARCA5O60264 1052 aaPredicted RBP7.89□□□□□ -1.15
NDEL1-216ENST00000583066 SURF6O75683 361 aaKnown RBP7.89□□□□□ -1.15
NDEL1-216ENST00000583066 DNAJB2P25686 324 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 PTPN5P54829 565 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 CCL15Q16663 113 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 PARP10Q53GL7 1025 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 SWT1Q5T5J6 900 aaKnown RBP7.89□□□□□ -1.15
NDEL1-216ENST00000583066 ZNF697Q5TEC3 545 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 APOBEC3FQ8IUX4 373 aaKnown RBP7.89□□□□□ -1.15
NDEL1-216ENST00000583066 CLASRPQ8N2M8 674 aaKnown RBP7.89□□□□□ -1.15
NDEL1-216ENST00000583066 PI4KAP1Q8N8J0 262 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 RHPN1Q8TCX5 695 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 OTUD7AQ8TE49 926 aaPredicted RBP7.89□□□□□ -1.15
NDEL1-216ENST00000583066 DEFB118Q96PH6 123 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 PHOX2BQ99453 314 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 ZC3H12CQ9C0D7 883 aaKnown RBP7.89□□□□□ -1.15
NDEL1-216ENST00000583066 DEFB129Q9H1M3 183 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 CHPF2Q9P2E5 772 aa7.89□□□□□ -1.15
NDEL1-216ENST00000583066 BIN2Q9UBW5 565 aaPredicted RBP7.89□□□□□ -1.15
NDEL1-216ENST00000583066 MYPNQ86TC9 1320 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 USP17L3A6NCW0 530 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 USP17L4A6NCW7 530 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 TLR2O60603 784 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 TFRCP02786 760 aaKnown RBP7.88□□□□□ -1.15
NDEL1-216ENST00000583066 CYP2E1P05181 493 aaPredicted RBP7.88□□□□□ -1.15
NDEL1-216ENST00000583066 EIF2S2P20042 333 aaKnown RBP7.88□□□□□ -1.15
NDEL1-216ENST00000583066 PSMC4P43686 418 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 PRMT2P55345 433 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 NEXNQ0ZGT2 675 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 CUL4AQ13619 759 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 KIF22Q14807 665 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 KLHL40Q2TBA0 621 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 DACT2Q5SW24 774 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 USP17L1Q7RTZ2 530 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 ALYREFQ86V81 257 aaKnown RBP7.88□□□□□ -1.15
NDEL1-216ENST00000583066 NLRP10Q86W26 655 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 RAET1EQ8TD07 263 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 ZBED3Q96IU2 234 aaPredicted RBP7.88□□□□□ -1.15
NDEL1-216ENST00000583066 TMEM134Q9H6X4 195 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 PHAXQ9H814 394 aaKnown RBP7.88□□□□□ -1.15
NDEL1-216ENST00000583066 C9orf78Q9NZ63 289 aaPredicted RBP7.88□□□□□ -1.15
NDEL1-216ENST00000583066 PCDHAC2Q9Y5I4 1007 aa7.88□□□□□ -1.15
NDEL1-216ENST00000583066 SPEF2Q9C093 1822 aa7.87□□□□□ -1.15
NDEL1-216ENST00000583066 APBB1O00213 710 aa7.87□□□□□ -1.15
NDEL1-216ENST00000583066 USP2O75604 605 aaPredicted RBP7.87□□□□□ -1.15
NDEL1-216ENST00000583066 GNRH1P01148 92 aa7.87□□□□□ -1.15
NDEL1-216ENST00000583066 MDM2Q00987 491 aaPredicted RBP7.87□□□□□ -1.15
NDEL1-216ENST00000583066 PRKCZQ05513 592 aa7.87□□□□□ -1.15
NDEL1-216ENST00000583066 NBPF12Q5TAG4 269 aaPredicted RBP7.87□□□□□ -1.15
NDEL1-216ENST00000583066 KIAA1211Q6ZU35 1233 aa7.87□□□□□ -1.15
NDEL1-216ENST00000583066 LRP10Q7Z4F1 713 aa7.87□□□□□ -1.15
NDEL1-216ENST00000583066 TTYH1Q9H313 450 aaPredicted RBP7.87□□□□□ -1.15
NDEL1-216ENST00000583066 CACNA1FO60840 1977 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 TCF20Q9UGU0 1960 aaKnown RBP7.86□□□□□ -1.15
NDEL1-216ENST00000583066 SH3TC1Q8TE82 1336 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 GRM8O00222 908 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 SGSM2O43147 1006 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 PPP1R12BO60237 982 aaPredicted RBP7.86□□□□□ -1.15
NDEL1-216ENST00000583066 CD2BP2O95400 341 aaKnown RBP7.86□□□□□ -1.15
NDEL1-216ENST00000583066 BAG4O95429 457 aaKnown RBP7.86□□□□□ -1.15
NDEL1-216ENST00000583066 ANXA1P04083 346 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 INHAP05111 366 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 FOSL2P15408 326 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 ELNP15502 786 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 HSPA4P34932 840 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 UBXN2AP68543 259 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 OS9Q13438 667 aaPredicted RBP7.86□□□□□ -1.15
NDEL1-216ENST00000583066 PROSER3Q2NL68 480 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 PODNQ7Z5L7 613 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 NECAB2Q7Z6G3 386 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 PI4K2BQ8TCG2 481 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 RILPL2Q969X0 211 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 TM6SF1Q9BZW5 370 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 SEMA6BQ9H3T3 888 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 ECHDC1Q9NTX5 307 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 PODXL2Q9NZ53 605 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 TRMT112Q9UI30 125 aaKnown RBP7.86□□□□□ -1.15
NDEL1-216ENST00000583066 CPA4Q9UI42 421 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 TSR3Q9UJK0 312 aaKnown RBP7.86□□□□□ -1.15
NDEL1-216ENST00000583066 GABRQQ9UN88 632 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 MAP3K2Q9Y2U5 619 aa7.86□□□□□ -1.15
NDEL1-216ENST00000583066 LTBP2Q14767 1821 aa7.85□□□□□ -1.15
NDEL1-216ENST00000583066 RAD50Q92878 1312 aa7.85□□□□□ -1.15
NDEL1-216ENST00000583066 ADGRA2Q96PE1 1338 aa7.85□□□□□ -1.15
NDEL1-216ENST00000583066 DOCK3Q8IZD9 2030 aa7.85□□□□□ -1.15
NDEL1-216ENST00000583066 CLRN2A0PK11 232 aa7.85□□□□□ -1.15
NDEL1-216ENST00000583066 BTBD19C9JJ37 291 aa7.85□□□□□ -1.15
NDEL1-216ENST00000583066 FMNL1O95466 1100 aaPredicted RBP7.85□□□□□ -1.15
NDEL1-216ENST00000583066 MBD3O95983 291 aa7.85□□□□□ -1.15
NDEL1-216ENST00000583066 IFIT2P09913 472 aaKnown RBP7.85□□□□□ -1.15
NDEL1-216ENST00000583066 NBPF7P0C2Y1 421 aaPredicted RBP7.85□□□□□ -1.15
NDEL1-216ENST00000583066 IREB2P48200 963 aaKnown RBP7.85□□□□□ -1.15
NDEL1-216ENST00000583066 NEK4P51957 841 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms