RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 FXR1P51114 621 aaKnown RBP eCLIP17.66■□□□□ 0.42
ITGB4-208ENST00000582629 DYNLL1P63167 89 aaKnown RBP17.66■□□□□ 0.42
ITGB4-208ENST00000582629 IRX3P78415 501 aaPredicted RBP17.66■□□□□ 0.42
ITGB4-208ENST00000582629 CEP85Q6P2H3 762 aa17.66■□□□□ 0.42
ITGB4-208ENST00000582629 CERS3Q8IU89 383 aa17.66■□□□□ 0.42
ITGB4-208ENST00000582629 C19orf81C9J6K1 198 aa17.65■□□□□ 0.42
ITGB4-208ENST00000582629 HOXA7P31268 230 aaPredicted RBP17.65■□□□□ 0.42
ITGB4-208ENST00000582629 ERC1Q8IUD2 1116 aa17.65■□□□□ 0.42
ITGB4-208ENST00000582629 DEFB118Q96PH6 123 aa17.65■□□□□ 0.42
ITGB4-208ENST00000582629 PAK6Q9NQU5 681 aaPredicted RBP17.65■□□□□ 0.42
ITGB4-208ENST00000582629 MORF4L1Q9UBU8 362 aa17.65■□□□□ 0.42
ITGB4-208ENST00000582629 SAP30BPQ9UHR5 308 aaKnown RBP17.65■□□□□ 0.42
ITGB4-208ENST00000582629 ZBTB21Q9ULJ3 1066 aa17.65■□□□□ 0.42
ITGB4-208ENST00000582629 USP17L10C9JJH3 530 aa17.64■□□□□ 0.41
ITGB4-208ENST00000582629 GDF11O95390 407 aa17.64■□□□□ 0.41
ITGB4-208ENST00000582629 JAG1P78504 1218 aa17.64■□□□□ 0.41
ITGB4-208ENST00000582629 TMED8Q6PL24 325 aaPredicted RBP17.64■□□□□ 0.41
ITGB4-208ENST00000582629 MIER1Q8N108 512 aa17.64■□□□□ 0.41
ITGB4-208ENST00000582629 MAGEB6Q8N7X4 407 aa17.64■□□□□ 0.41
ITGB4-208ENST00000582629 TRIOBPQ9H2D6 2365 aa17.64■□□□□ 0.41
ITGB4-208ENST00000582629 PLXNB2O15031 1838 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 TFRCP02786 760 aaKnown RBP17.63■□□□□ 0.41
ITGB4-208ENST00000582629 HMGCRP04035 888 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 MAP3K12Q12852 859 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 CHRDL2Q6WN34 429 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 AACSQ86V21 672 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 MIGA1Q8NAN2 632 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 CRISPLD2Q9H0B8 497 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 GJD2Q9UKL4 321 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 EXOC6BQ9Y2D4 811 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 NR2E3Q9Y5X4 410 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 ZBED9Q6R2W3 1325 aa17.63■□□□□ 0.41
ITGB4-208ENST00000582629 USP5P45974 858 aa17.62■□□□□ 0.41
ITGB4-208ENST00000582629 SHROOM1Q2M3G4 852 aaPredicted RBP17.62■□□□□ 0.41
ITGB4-208ENST00000582629 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
ITGB4-208ENST00000582629 P2RX7Q99572 595 aaKnown RBP17.62■□□□□ 0.41
ITGB4-208ENST00000582629 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.62■□□□□ 0.41
ITGB4-208ENST00000582629 HERVK_113P62684 666 aa17.61■□□□□ 0.41
ITGB4-208ENST00000582629 GPRC5AQ8NFJ5 357 aa17.61■□□□□ 0.41
ITGB4-208ENST00000582629 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
ITGB4-208ENST00000582629 GTF3C2Q8WUA4 911 aaPredicted RBP17.61■□□□□ 0.41
ITGB4-208ENST00000582629 EHD4Q9H223 541 aa17.61■□□□□ 0.41
ITGB4-208ENST00000582629 ANTXR1Q9H6X2 564 aa17.61■□□□□ 0.41
ITGB4-208ENST00000582629 NDUFB9Q9Y6M9 179 aa17.61■□□□□ 0.41
ITGB4-208ENST00000582629 GH2P01242 217 aa17.6■□□□□ 0.41
ITGB4-208ENST00000582629 MS4A1P11836 297 aa17.6■□□□□ 0.41
ITGB4-208ENST00000582629 USP17L2Q6R6M4 530 aa17.6■□□□□ 0.41
ITGB4-208ENST00000582629 SERPINB13Q9UIV8 391 aa17.6■□□□□ 0.41
ITGB4-208ENST00000582629 NAV1Q8NEY1 1877 aa17.6■□□□□ 0.41
ITGB4-208ENST00000582629 DDX60LQ5H9U9 1706 aaKnown RBP17.59■□□□□ 0.41
ITGB4-208ENST00000582629 RPTORQ8N122 1335 aa17.59■□□□□ 0.41
ITGB4-208ENST00000582629 TTF1Q15361 905 aaPredicted RBP17.59■□□□□ 0.41
ITGB4-208ENST00000582629 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
ITGB4-208ENST00000582629 TATDN1Q6P1N9 297 aa17.59■□□□□ 0.41
ITGB4-208ENST00000582629 TTC6Q86TZ1 520 aa17.59■□□□□ 0.41
ITGB4-208ENST00000582629 ANKLE1Q8NAG6 615 aa17.59■□□□□ 0.41
ITGB4-208ENST00000582629 RHPN1Q8TCX5 695 aa17.59■□□□□ 0.41
ITGB4-208ENST00000582629 SOCS4Q8WXH5 440 aa17.59■□□□□ 0.41
ITGB4-208ENST00000582629 NUDT12Q9BQG2 462 aa17.59■□□□□ 0.41
ITGB4-208ENST00000582629 TXNRD2Q9NNW7 524 aa17.59■□□□□ 0.41
ITGB4-208ENST00000582629 HMX1Q9NP08 348 aaPredicted RBP17.59■□□□□ 0.41
ITGB4-208ENST00000582629 EMILIN3Q9NT22 766 aa17.59■□□□□ 0.41
ITGB4-208ENST00000582629 ALPK3Q96L96 1907 aa17.59■□□□□ 0.41
ITGB4-208ENST00000582629 EVI5O60447 810 aa17.58■□□□□ 0.4
ITGB4-208ENST00000582629 CYP2B6P20813 491 aa17.58■□□□□ 0.4
ITGB4-208ENST00000582629 MAPK4P31152 587 aa17.58■□□□□ 0.4
ITGB4-208ENST00000582629 ERVK-9P63128 1117 aa17.58■□□□□ 0.4
ITGB4-208ENST00000582629 ERVK-24P63145 666 aa17.58■□□□□ 0.4
ITGB4-208ENST00000582629 PAWRQ96IZ0 340 aaKnown RBP17.58■□□□□ 0.4
ITGB4-208ENST00000582629 C12orf42Q96LP6 360 aa17.58■□□□□ 0.4
ITGB4-208ENST00000582629 RIOK1Q9BRS2 568 aaKnown RBP17.58■□□□□ 0.4
ITGB4-208ENST00000582629 IL1RAPL2Q9NP60 686 aa17.58■□□□□ 0.4
ITGB4-208ENST00000582629 RBM27Q9P2N5 1060 aaKnown RBP17.58■□□□□ 0.4
ITGB4-208ENST00000582629 RBPJLQ9UBG7 517 aa17.58■□□□□ 0.4
ITGB4-208ENST00000582629 USP14P54578 494 aa17.57■□□□□ 0.4
ITGB4-208ENST00000582629 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
ITGB4-208ENST00000582629 NECAB2Q7Z6G3 386 aa17.57■□□□□ 0.4
ITGB4-208ENST00000582629 CCAR1Q8IX12 1150 aaKnown RBP17.57■□□□□ 0.4
ITGB4-208ENST00000582629 CLASRPQ8N2M8 674 aaKnown RBP17.57■□□□□ 0.4
ITGB4-208ENST00000582629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.57■□□□□ 0.4
ITGB4-208ENST00000582629 TRIB2Q92519 343 aa17.57■□□□□ 0.4
ITGB4-208ENST00000582629 FEZ1Q99689 392 aa17.57■□□□□ 0.4
ITGB4-208ENST00000582629 MAGEB6P1A0A0J9YX57 407 aa17.56■□□□□ 0.4
ITGB4-208ENST00000582629 PEX10O60683 326 aa17.56■□□□□ 0.4
ITGB4-208ENST00000582629 XRCC5P13010 732 aaKnown RBP17.56■□□□□ 0.4
ITGB4-208ENST00000582629 TRIM32Q13049 653 aa17.56■□□□□ 0.4
ITGB4-208ENST00000582629 RAB3GAP1Q15042 981 aa17.56■□□□□ 0.4
ITGB4-208ENST00000582629 ABCB5Q2M3G0 1257 aa17.56■□□□□ 0.4
ITGB4-208ENST00000582629 CERKLQ49MI3 558 aaPredicted RBP17.56■□□□□ 0.4
ITGB4-208ENST00000582629 RPAP2Q8IXW5 612 aaPredicted RBP17.56■□□□□ 0.4
ITGB4-208ENST00000582629 TRMT44Q8IYL2 757 aaKnown RBP17.56■□□□□ 0.4
ITGB4-208ENST00000582629 KIF1BPQ96EK5 621 aa17.56■□□□□ 0.4
ITGB4-208ENST00000582629 PAGR1Q9BTK6 254 aa17.56■□□□□ 0.4
ITGB4-208ENST00000582629 PRO3102Q9H379 93 aa17.56■□□□□ 0.4
ITGB4-208ENST00000582629 CABP5Q9NP86 173 aa17.56■□□□□ 0.4
ITGB4-208ENST00000582629 USP17L15C9J2P7 530 aa17.55■□□□□ 0.4
ITGB4-208ENST00000582629 USP17L13C9JLJ4 530 aa17.55■□□□□ 0.4
ITGB4-208ENST00000582629 USP17L11C9JVI0 530 aa17.55■□□□□ 0.4
ITGB4-208ENST00000582629 USP17L18D6R9N7 530 aa17.55■□□□□ 0.4
ITGB4-208ENST00000582629 USP17L22D6RA61 530 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms