RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 IRF6O14896 467 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 PRKAB2O43741 272 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 NT5C2P49902 561 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 PLCD1P51178 756 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 ALX1Q15699 326 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
TOP3A-212ENST00000582122 PRPF38BQ5VTL8 546 aaKnown RBP12.44□□□□□ -0.42
TOP3A-212ENST00000582122 CTR9Q6PD62 1173 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 MS4A4AQ96JQ5 239 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 ZIC5Q96T25 663 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 WDR18Q9BV38 432 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 ZHX2Q9Y6X8 837 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 NAV1Q8NEY1 1877 aa12.44□□□□□ -0.42
TOP3A-212ENST00000582122 ZMYM6O95789 1325 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 CCDC171Q6TFL3 1326 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 RAD50Q92878 1312 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 CCL15-CCL14A0A0B4J2E2 113 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 C19orf81C9J6K1 198 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 SOX10P56693 466 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 MKRN3Q13064 507 aaKnown RBP12.43□□□□□ -0.42
TOP3A-212ENST00000582122 CCL15Q16663 113 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 ABCB5Q2M3G0 1257 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 SLFNL1Q499Z3 407 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 C16orf86Q6ZW13 317 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 CTU1Q7Z7A3 348 aaKnown RBP12.43□□□□□ -0.42
TOP3A-212ENST00000582122 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 IFNL3Q8IZI9 196 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 ZNF280CQ8ND82 737 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-212ENST00000582122 AFG3L2Q9Y4W6 797 aa12.43□□□□□ -0.42
TOP3A-212ENST00000582122 CHGBP05060 677 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 PCP11498 1178 aaKnown RBP12.42□□□□□ -0.42
TOP3A-212ENST00000582122 GJA5P36382 358 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 PDE4BQ07343 736 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-212ENST00000582122 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.42
TOP3A-212ENST00000582122 BMP2KLQ5H9B9 411 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 TMEM179Q6ZVK1 233 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 SH2D4AQ9H788 454 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 DNAJC18Q9H819 358 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 MKNK2Q9HBH9 465 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 ZBTB21Q9ULJ3 1066 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 SLC45A1Q9Y2W3 748 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 LAMB1P07942 1786 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 DOCK1Q14185 1865 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 ROBO3Q96MS0 1386 aa12.42□□□□□ -0.42
TOP3A-212ENST00000582122 A0A0D9SFI3 127 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 A0A0G2JLL6 359 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-212ENST00000582122 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 MINDY4BA8MYZ0 360 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 TRPA1O75762 1119 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 GSPT1P15170 499 aaKnown RBP12.41□□□□□ -0.42
TOP3A-212ENST00000582122 SHMT1P34896 483 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 CDK8P49336 464 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 USP14P54578 494 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 DDX60LQ5H9U9 1706 aaKnown RBP12.41□□□□□ -0.42
TOP3A-212ENST00000582122 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 CWC27Q6UX04 472 aaKnown RBP12.41□□□□□ -0.42
TOP3A-212ENST00000582122 PRRT2Q7Z6L0 340 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-212ENST00000582122 ANKRD23Q86SG2 305 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 PROCA1Q8NCQ7 364 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-212ENST00000582122 BRI3BPQ8WY22 251 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 FAM227BQ96M60 508 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 SEC62Q99442 399 aaKnown RBP12.41□□□□□ -0.42
TOP3A-212ENST00000582122 ZFYVE28Q9HCC9 887 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 TMOD4Q9NZQ9 345 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 CTNNA3Q9UI47 895 aa12.41□□□□□ -0.42
TOP3A-212ENST00000582122 USP17L10C9JJH3 530 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 GH2P01242 217 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 BACE1P56817 501 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 SPP2Q13103 211 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 ARHGEF6Q15052 776 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 PKN2Q16513 984 aaKnown RBP12.4□□□□□ -0.42
TOP3A-212ENST00000582122 SLC4A8Q2Y0W8 1093 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 SH3D19Q5HYK7 790 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 ZNF444Q8N0Y2 327 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-212ENST00000582122 CNKSR2Q8WXI2 1034 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 DSCC1Q9BVC3 393 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 ANAPC4Q9UJX5 808 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 PNMA3Q9UL41 463 aa12.4□□□□□ -0.42
TOP3A-212ENST00000582122 TRIM75PA6NK02 468 aa12.39□□□□□ -0.43
TOP3A-212ENST00000582122 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
TOP3A-212ENST00000582122 HSPD1P10809 573 aaKnown RBP12.39□□□□□ -0.43
TOP3A-212ENST00000582122 PPARAQ07869 468 aa12.39□□□□□ -0.43
TOP3A-212ENST00000582122 RAB3GAP1Q15042 981 aa12.39□□□□□ -0.43
TOP3A-212ENST00000582122 PARK7Q99497 189 aaKnown RBP12.39□□□□□ -0.43
TOP3A-212ENST00000582122 RNF41Q9H4P4 317 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-212ENST00000582122 KANSL2Q9H9L4 492 aa12.39□□□□□ -0.43
TOP3A-212ENST00000582122 ARHGEF10LQ9HCE6 1279 aa12.39□□□□□ -0.43
TOP3A-212ENST00000582122 EPB41L4AQ9HCS5 686 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-212ENST00000582122 SYNPO2Q9UMS6 1093 aa12.39□□□□□ -0.43
TOP3A-212ENST00000582122 SIPA1L1O43166 1804 aa12.39□□□□□ -0.43
TOP3A-212ENST00000582122 BAZ2AQ9UIF9 1905 aaKnown RBP12.39□□□□□ -0.43
TOP3A-212ENST00000582122 BTBD19C9JJ37 291 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 IGF2BP3O00425 579 aaKnown RBP eCLIP12.38□□□□□ -0.43
TOP3A-212ENST00000582122 GDF11O95390 407 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 FGAP02671 866 aa12.38□□□□□ -0.43
TOP3A-212ENST00000582122 CYP2D6P10635 497 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms