RNA–Protein interactions for RNA: ENST00000581339.1

RIOK3-206, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-206ENST00000581339 FAM8A1Q9UBU6 413 aa9.48□□□□□ -0.89
RIOK3-206ENST00000581339 MARF1Q9Y4F3 1742 aaKnown RBP9.48□□□□□ -0.89
RIOK3-206ENST00000581339 SOX1O00570 391 aaPredicted RBP9.47□□□□□ -0.89
RIOK3-206ENST00000581339 CD68P34810 354 aaPredicted RBP9.47□□□□□ -0.89
RIOK3-206ENST00000581339 DAB2P98082 770 aa9.47□□□□□ -0.89
RIOK3-206ENST00000581339 SAFB2Q14151 953 aaKnown RBP eCLIP9.47□□□□□ -0.89
RIOK3-206ENST00000581339 AK5Q9Y6K8 562 aa9.47□□□□□ -0.89
RIOK3-206ENST00000581339 SPATA31A3Q5VYP0 1347 aa9.47□□□□□ -0.89
RIOK3-206ENST00000581339 NRXN1Q9ULB1 1477 aa9.47□□□□□ -0.89
RIOK3-206ENST00000581339 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
RIOK3-206ENST00000581339 B3GALT4O96024 378 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 SELPP16109 830 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 SUZ12Q15022 739 aaKnown RBP9.46□□□□□ -0.9
RIOK3-206ENST00000581339 ZNF423Q2M1K9 1284 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 HGSNATQ68CP4 663 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 IGF2-ASQ6U949 168 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 SHISA2Q6UWI4 295 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 KRT28Q7Z3Y7 464 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 TMC4Q7Z404 712 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 C3orf58Q8NDZ4 430 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 KLHDC7BQ96G42 594 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 AKAP2Q9Y2D5 859 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 GLI3P10071 1580 aa9.46□□□□□ -0.9
RIOK3-206ENST00000581339 C9orf172C9J069 976 aa9.45□□□□□ -0.9
RIOK3-206ENST00000581339 TM4SF5O14894 197 aa9.45□□□□□ -0.9
RIOK3-206ENST00000581339 USP17L7P0C7H9 530 aa9.45□□□□□ -0.9
RIOK3-206ENST00000581339 FOXD4L6Q3SYB3 417 aaPredicted RBP9.45□□□□□ -0.9
RIOK3-206ENST00000581339 FOXD4L3Q6VB84 417 aaPredicted RBP9.45□□□□□ -0.9
RIOK3-206ENST00000581339 DDX54Q8TDD1 881 aaKnown RBP9.45□□□□□ -0.9
RIOK3-206ENST00000581339 LENG1Q96BZ8 264 aaPredicted RBP9.45□□□□□ -0.9
RIOK3-206ENST00000581339 FAM161BQ96MY7 647 aa9.45□□□□□ -0.9
RIOK3-206ENST00000581339 PRAM1Q96QH2 718 aa9.45□□□□□ -0.9
RIOK3-206ENST00000581339 BCL11AQ9H165 835 aa9.45□□□□□ -0.9
RIOK3-206ENST00000581339 SLIT2O94813 1529 aa9.45□□□□□ -0.9
RIOK3-206ENST00000581339 ZNF16P17020 682 aaPredicted RBP9.44□□□□□ -0.9
RIOK3-206ENST00000581339 NRG1Q02297 640 aaPredicted RBP9.44□□□□□ -0.9
RIOK3-206ENST00000581339 GSTM4Q03013 218 aa9.44□□□□□ -0.9
RIOK3-206ENST00000581339 UNC5CLQ8IV45 518 aa9.44□□□□□ -0.9
RIOK3-206ENST00000581339 RGS22Q8NE09 1264 aa9.44□□□□□ -0.9
RIOK3-206ENST00000581339 MRPL18Q9H0U6 180 aaKnown RBP9.44□□□□□ -0.9
RIOK3-206ENST00000581339 MRS2Q9HD23 443 aa9.44□□□□□ -0.9
RIOK3-206ENST00000581339 PPM1HQ9ULR3 514 aa9.44□□□□□ -0.9
RIOK3-206ENST00000581339 RALGAPBQ86X10 1494 aa9.44□□□□□ -0.9
RIOK3-206ENST00000581339 USP32Q8NFA0 1604 aa9.44□□□□□ -0.9
RIOK3-206ENST00000581339 KIF1AQ12756 1690 aa9.43□□□□□ -0.9
RIOK3-206ENST00000581339 RAB3GAP2Q9H2M9 1393 aa9.43□□□□□ -0.9
RIOK3-206ENST00000581339 NLRP12P59046 1061 aa9.43□□□□□ -0.9
RIOK3-206ENST00000581339 FAAP100Q0VG06 881 aa9.43□□□□□ -0.9
RIOK3-206ENST00000581339 PMFBP1Q8TBY8 1022 aa9.43□□□□□ -0.9
RIOK3-206ENST00000581339 KCNK4Q9NYG8 393 aa9.43□□□□□ -0.9
RIOK3-206ENST00000581339 BRWD3Q6RI45 1802 aa9.42□□□□□ -0.9
RIOK3-206ENST00000581339 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.42□□□□□ -0.9
RIOK3-206ENST00000581339 ADGRB1O14514 1584 aa9.42□□□□□ -0.9
RIOK3-206ENST00000581339 TNS3Q68CZ2 1445 aa9.42□□□□□ -0.9
RIOK3-206ENST00000581339 DHX57Q6P158 1386 aaKnown RBP9.42□□□□□ -0.9
RIOK3-206ENST00000581339 RBM47A0AV96 593 aaKnown RBP9.42□□□□□ -0.9
RIOK3-206ENST00000581339 DDX3YO15523 660 aaKnown RBP9.42□□□□□ -0.9
RIOK3-206ENST00000581339 SORBS3O60504 671 aa9.42□□□□□ -0.9
RIOK3-206ENST00000581339 ADAM11O75078 769 aa9.42□□□□□ -0.9
RIOK3-206ENST00000581339 CHRNA4P43681 627 aa9.42□□□□□ -0.9
RIOK3-206ENST00000581339 CD163Q86VB7 1156 aa9.42□□□□□ -0.9
RIOK3-206ENST00000581339 FOXD4L4Q8WXT5 416 aaPredicted RBP9.42□□□□□ -0.9
RIOK3-206ENST00000581339 HIRIP3Q9BW71 556 aaPredicted RBP9.42□□□□□ -0.9
RIOK3-206ENST00000581339 GPN3Q9UHW5 284 aaPredicted RBP9.42□□□□□ -0.9
RIOK3-206ENST00000581339 PRR36Q9H6K5 1346 aa9.41□□□□□ -0.9
RIOK3-206ENST00000581339 C1QTNF9BB2RNN3 333 aa9.41□□□□□ -0.9
RIOK3-206ENST00000581339 PPP2R3AQ06190 1150 aa9.41□□□□□ -0.9
RIOK3-206ENST00000581339 DUOXA2Q1HG44 320 aa9.41□□□□□ -0.9
RIOK3-206ENST00000581339 PLA2G4EQ3MJ16 856 aa9.41□□□□□ -0.9
RIOK3-206ENST00000581339 CEP44Q9C0F1 390 aa9.41□□□□□ -0.9
RIOK3-206ENST00000581339 ABCA3Q99758 1704 aa9.41□□□□□ -0.9
RIOK3-206ENST00000581339 PLCH1Q4KWH8 1693 aa9.4□□□□□ -0.9
RIOK3-206ENST00000581339 FAM83GA6ND36 823 aa9.4□□□□□ -0.9
RIOK3-206ENST00000581339 ZNF157P51786 506 aaPredicted RBP9.4□□□□□ -0.9
RIOK3-206ENST00000581339 MBTPS1Q14703 1052 aa9.4□□□□□ -0.9
RIOK3-206ENST00000581339 ANKRD24Q8TF21 1146 aa9.4□□□□□ -0.9
RIOK3-206ENST00000581339 UBASH3BQ8TF42 649 aa9.4□□□□□ -0.9
RIOK3-206ENST00000581339 USP26Q9BXU7 913 aa9.4□□□□□ -0.9
RIOK3-206ENST00000581339 TMEM39AQ9NV64 488 aa9.4□□□□□ -0.9
RIOK3-206ENST00000581339 POGKQ9P215 609 aa9.4□□□□□ -0.9
RIOK3-206ENST00000581339 VTI1BQ9UEU0 232 aa9.4□□□□□ -0.9
RIOK3-206ENST00000581339 DLC1Q96QB1 1528 aa9.4□□□□□ -0.91
RIOK3-206ENST00000581339 SBNO1A3KN83 1393 aa9.39□□□□□ -0.91
RIOK3-206ENST00000581339 WISP1O95388 367 aa9.39□□□□□ -0.91
RIOK3-206ENST00000581339 CYP11A1P05108 521 aa9.39□□□□□ -0.91
RIOK3-206ENST00000581339 AP3B2Q13367 1082 aa9.39□□□□□ -0.91
RIOK3-206ENST00000581339 ADGRE1Q14246 886 aa9.39□□□□□ -0.91
RIOK3-206ENST00000581339 VPS72Q15906 364 aa9.39□□□□□ -0.91
RIOK3-206ENST00000581339 TPTE2Q6XPS3 522 aa9.39□□□□□ -0.91
RIOK3-206ENST00000581339 ACAD11Q709F0 780 aa9.39□□□□□ -0.91
RIOK3-206ENST00000581339 DEFB132Q7Z7B7 95 aa9.39□□□□□ -0.91
RIOK3-206ENST00000581339 TMEM130Q8N3G9 435 aa9.39□□□□□ -0.91
RIOK3-206ENST00000581339 TTF2Q9UNY4 1162 aaKnown RBP9.39□□□□□ -0.91
RIOK3-206ENST00000581339 TRPM3Q9HCF6 1732 aaPredicted RBP9.39□□□□□ -0.91
RIOK3-206ENST00000581339 ADGRB2O60241 1585 aa9.38□□□□□ -0.91
RIOK3-206ENST00000581339 F8W735 103 aaPredicted RBP9.38□□□□□ -0.91
RIOK3-206ENST00000581339 FBXO24O75426 580 aa9.38□□□□□ -0.91
RIOK3-206ENST00000581339 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.38□□□□□ -0.91
RIOK3-206ENST00000581339 CRELD1Q96HD1 420 aa9.38□□□□□ -0.91
RIOK3-206ENST00000581339 TRIM56Q9BRZ2 755 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms