RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 AGTPBP1Q9UPW5 1226 aa8.7□□□□□ -1.02
SNX11-208ENST00000581298 TRIM17Q9Y577 477 aa8.7□□□□□ -1.02
SNX11-208ENST00000581298 SALL3Q9BXA9 1300 aa8.7□□□□□ -1.02
SNX11-208ENST00000581298 SIPA1L1O43166 1804 aa8.7□□□□□ -1.02
SNX11-208ENST00000581298 PHIPQ8WWQ0 1821 aa8.7□□□□□ -1.02
SNX11-208ENST00000581298 MYO5AQ9Y4I1 1855 aaKnown RBP8.7□□□□□ -1.02
SNX11-208ENST00000581298 AK9Q5TCS8 1911 aa8.7□□□□□ -1.02
SNX11-208ENST00000581298 FOCADQ5VW36 1801 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 C19orf81C9J6K1 198 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 GOLIM4O00461 696 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 HLA-DOAP06340 250 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 BACE1P56817 501 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 JAG1P78504 1218 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 TICAM2Q86XR7 235 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 C12orf42Q96LP6 360 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 BOLA2Q9H3K6 86 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 AS3MTQ9HBK9 375 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 SERPINB13Q9UIV8 391 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 ZNF532Q9HCE3 1301 aa8.69□□□□□ -1.02
SNX11-208ENST00000581298 RBBP6Q7Z6E9 1792 aaKnown RBP8.68□□□□□ -1.02
SNX11-208ENST00000581298 DOCK1Q14185 1865 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 PTPRFP10586 1907 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 MAGEB6P1A0A0J9YX57 407 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 FAM196BA6NMK8 535 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 CTGFP29279 349 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 SPP2Q13103 211 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 MIGA1Q8NAN2 632 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 EDC3Q96F86 508 aaKnown RBP8.68□□□□□ -1.02
SNX11-208ENST00000581298 CRNKL1Q9BZJ0 848 aaKnown RBP8.68□□□□□ -1.02
SNX11-208ENST00000581298 DCP1AQ9NPI6 582 aaPredicted RBP8.68□□□□□ -1.02
SNX11-208ENST00000581298 ATP8A2Q9NTI2 1148 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 ZBTB21Q9ULJ3 1066 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 TTC41PQ6P2S7 1318 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 CDK5RAP2Q96SN8 1893 aa8.68□□□□□ -1.02
SNX11-208ENST00000581298 APBB1O00213 710 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 SMARCA5O60264 1052 aaPredicted RBP8.67□□□□□ -1.02
SNX11-208ENST00000581298 GUCY1A2P33402 732 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 SHMT1P34896 483 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 USP5P45974 858 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 PLCD1P51178 756 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 FAM110CQ1W6H9 321 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 ZSCAN25Q6NSZ9 544 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 GIMAP6Q6P9H5 292 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 LCORLQ8N3X6 602 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 KBTBD3Q8NAB2 608 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 PI4K2BQ8TCG2 481 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 ZNF333Q96JL9 665 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 DNAJC2Q99543 621 aaKnown RBP8.67□□□□□ -1.02
SNX11-208ENST00000581298 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.02
SNX11-208ENST00000581298 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.67□□□□□ -1.02
SNX11-208ENST00000581298 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.67□□□□□ -1.02
SNX11-208ENST00000581298 MORF4L1Q9UBU8 362 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 STAP2Q9UGK3 403 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 SRRDQ9UH36 339 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 PNMA3Q9UL41 463 aa8.67□□□□□ -1.02
SNX11-208ENST00000581298 SPTBN5Q9NRC6 3674 aaKnown RBP8.66□□□□□ -1.02
SNX11-208ENST00000581298 DDX60LQ5H9U9 1706 aaKnown RBP8.66□□□□□ -1.02
SNX11-208ENST00000581298 TRIM75PA6NK02 468 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 USP17L10C9JJH3 530 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 ZFYP08048 801 aaPredicted RBP8.66□□□□□ -1.02
SNX11-208ENST00000581298 CYP2C8P10632 490 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 CAPN2P17655 700 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 HOXD10P28358 340 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 GCLCP48506 637 aaPredicted RBP8.66□□□□□ -1.02
SNX11-208ENST00000581298 PABPC4Q13310 644 aaKnown RBP eCLIP8.66□□□□□ -1.02
SNX11-208ENST00000581298 IRF5Q13568 498 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 KIF22Q14807 665 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 SBK1Q52WX2 424 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 TREML2Q5T2D2 321 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 C12orf60Q5U649 245 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 LBX2Q6XYB7 198 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 CCDC84Q86UT8 332 aaPredicted RBP8.66□□□□□ -1.02
SNX11-208ENST00000581298 TRIM47Q96LD4 638 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 STRBPQ96SI9 672 aaKnown RBP8.66□□□□□ -1.02
SNX11-208ENST00000581298 CRBNQ96SW2 442 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 ARHGAP39Q9C0H5 1083 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 KIAA1683Q9H0B3 1180 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 SWAP70Q9UH65 585 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 SAP30BPQ9UHR5 308 aaKnown RBP8.66□□□□□ -1.02
SNX11-208ENST00000581298 CPA4Q9UI42 421 aa8.66□□□□□ -1.02
SNX11-208ENST00000581298 GLRX3O76003 335 aaKnown RBP8.65□□□□□ -1.02
SNX11-208ENST00000581298 OSBPP22059 807 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 PSMC4P43686 418 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 HMGCS2P54868 508 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 CERKLQ49MI3 558 aaPredicted RBP8.65□□□□□ -1.02
SNX11-208ENST00000581298 GADL1Q6ZQY3 521 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 SMC5Q8IY18 1101 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 CRACR2BQ8N4Y2 399 aaPredicted RBP8.65□□□□□ -1.02
SNX11-208ENST00000581298 GTF3C2Q8WUA4 911 aaPredicted RBP8.65□□□□□ -1.02
SNX11-208ENST00000581298 APPBP2Q92624 585 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 OSBP2Q969R2 916 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 CCDC17Q96LX7 622 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 PUS7LQ9H0K6 701 aaKnown RBP8.65□□□□□ -1.02
SNX11-208ENST00000581298 EMILIN3Q9NT22 766 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 MCM9Q9NXL9 1143 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 PTCH2Q9Y6C5 1203 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 LOC285556D6RIA3 1793 aa8.65□□□□□ -1.02
SNX11-208ENST00000581298 MYH1P12882 1939 aa8.64□□□□□ -1.03
SNX11-208ENST00000581298 C19orf67A6NJJ6 358 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms