RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 FPGT-TNNI3KV9GXZ4 949 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 BTAF1O14981 1849 aa7.61□□□□□ -1.19
PTPRM-213ENST00000580949 SH3TC1Q8TE82 1336 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 C21orf2O43822 256 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 PDE8AO60658 829 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 CIAO1O76071 339 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 MAP4K4O95819 1239 aaPredicted RBP7.6□□□□□ -1.19
PTPRM-213ENST00000580949 IFIT2P09913 472 aaKnown RBP7.6□□□□□ -1.19
PTPRM-213ENST00000580949 PDIA4P13667 645 aaKnown RBP7.6□□□□□ -1.19
PTPRM-213ENST00000580949 IGFBP4P22692 258 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 CHMLP26374 656 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 NOS2P35228 1153 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 VEGFBP49765 207 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 TBCELQ5QJ74 424 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 TMEM164Q5U3C3 297 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 USPL1Q5W0Q7 1092 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 TBC1D9BQ66K14 1250 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 C1orf216Q8TAB5 229 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 ZDHHC1Q8WTX9 485 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 NANOS1Q8WY41 292 aaKnown RBP7.6□□□□□ -1.19
PTPRM-213ENST00000580949 GMCL1Q96IK5 515 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 GAS2L1Q99501 681 aaPredicted RBP7.6□□□□□ -1.19
PTPRM-213ENST00000580949 DBNDD2Q9BQY9 259 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 C22orf23Q9BZE7 217 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 ZDHHC3Q9NYG2 299 aa7.6□□□□□ -1.19
PTPRM-213ENST00000580949 DBNLQ9UJU6 430 aaKnown RBP7.6□□□□□ -1.19
PTPRM-213ENST00000580949 AFDNP55196 1824 aaKnown RBP7.59□□□□□ -1.19
PTPRM-213ENST00000580949 TTC41PQ6P2S7 1318 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 COL5A3P25940 1745 aaPredicted RBP7.59□□□□□ -1.19
PTPRM-213ENST00000580949 SERTM1A2A2V5 107 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 PPP1R12BO60237 982 aaPredicted RBP7.59□□□□□ -1.19
PTPRM-213ENST00000580949 GLRX3O76003 335 aaKnown RBP7.59□□□□□ -1.19
PTPRM-213ENST00000580949 WFS1O76024 890 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 VSIG8P0DPA2 414 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 MSX1P28360 303 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 IL15P40933 162 aaPredicted RBP7.59□□□□□ -1.19
PTPRM-213ENST00000580949 TIMM10P62072 90 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 IFIT5Q13325 482 aaKnown RBP7.59□□□□□ -1.19
PTPRM-213ENST00000580949 CCDC57Q2TAC2 916 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 TREML4Q6UXN2 200 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 BICDL1Q6ZP65 573 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 SCG3Q8WXD2 468 aaKnown RBP7.59□□□□□ -1.19
PTPRM-213ENST00000580949 RILPL2Q969X0 211 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 GPR108Q9NPR9 543 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 ZNF652Q9Y2D9 606 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 RTCBQ9Y3I0 505 aaKnown RBP7.59□□□□□ -1.19
PTPRM-213ENST00000580949 RIPOR2Q9Y4F9 1068 aa7.59□□□□□ -1.19
PTPRM-213ENST00000580949 SBF2Q86WG5 1849 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 ANKRD18BA2A2Z9 1011 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 EML1O00423 815 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 ATP5JP18859 108 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 WEE1P30291 646 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 RBM25P49756 843 aaKnown RBP7.58□□□□□ -1.2
PTPRM-213ENST00000580949 HIRAP54198 1017 aaPredicted RBP7.58□□□□□ -1.2
PTPRM-213ENST00000580949 TXNRD1Q16881 649 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 SLC10A5Q5PT55 438 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 TRAPPC3LQ5T215 181 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 RIPOR1Q6ZS17 1223 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 TRIM22Q8IYM9 498 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 KIF2CQ99661 725 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 USP26Q9BXU7 913 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 IL25Q9H293 177 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 UPF2Q9HAU5 1272 aaKnown RBP7.58□□□□□ -1.2
PTPRM-213ENST00000580949 SEC31BQ9NQW1 1179 aa7.58□□□□□ -1.2
PTPRM-213ENST00000580949 CUEDC1Q9NWM3 386 aaPredicted RBP7.58□□□□□ -1.2
PTPRM-213ENST00000580949 BRWD3Q6RI45 1802 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 ERC2O15083 957 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 APBA3O96018 575 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 ATP4AP20648 1035 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 ADORA1P30542 326 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 RFC4P35249 363 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 LBRQ14739 615 aaKnown RBP7.57□□□□□ -1.2
PTPRM-213ENST00000580949 VGLL2Q8N8G2 317 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 IRF7Q92985 503 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 CLP1Q92989 425 aaKnown RBP7.57□□□□□ -1.2
PTPRM-213ENST00000580949 AIDAQ96BJ3 306 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 EDC3Q96F86 508 aaKnown RBP7.57□□□□□ -1.2
PTPRM-213ENST00000580949 CRISPLD1Q9H336 500 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 BOLA2Q9H3K6 86 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 GPAMQ9HCL2 828 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 ZNF232Q9UNY5 417 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 PARP3Q9Y6F1 533 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 LY75O60449 1722 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 NUP98P52948 1817 aa7.57□□□□□ -1.2
PTPRM-213ENST00000580949 RIC1Q4ADV7 1423 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 A0A1B0GUL7 405 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 PLSCR1O15162 318 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 LGR5O75473 907 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 NFIXQ14938 502 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 SF3B3Q15393 1217 aaKnown RBP7.56□□□□□ -1.2
PTPRM-213ENST00000580949 ZNF827Q17R98 1081 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 TAF7LQ5H9L4 462 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
PTPRM-213ENST00000580949 LDHAL6AQ6ZMR3 332 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 SV2AQ7L0J3 742 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 PGBD3Q8N328 593 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 EVI5LQ96CN4 794 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 GPATCH3Q96I76 525 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 NEUROD6Q96NK8 337 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms