RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 TMOD4Q9NZQ9 345 aa13.31□□□□□ -0.28
TOP3A-210ENST00000580713 PHIPQ8WWQ0 1821 aa13.31□□□□□ -0.28
TOP3A-210ENST00000580713 GAKO14976 1311 aa13.31□□□□□ -0.28
TOP3A-210ENST00000580713 TTC28Q96AY4 2481 aa13.3□□□□□ -0.28
TOP3A-210ENST00000580713 SEMA3EO15041 775 aa13.3□□□□□ -0.28
TOP3A-210ENST00000580713 FOSL2P15408 326 aa13.3□□□□□ -0.28
TOP3A-210ENST00000580713 MAPK4P31152 587 aa13.3□□□□□ -0.28
TOP3A-210ENST00000580713 SHHQ15465 462 aa13.3□□□□□ -0.28
TOP3A-210ENST00000580713 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
TOP3A-210ENST00000580713 SIL1Q9H173 461 aa13.3□□□□□ -0.28
TOP3A-210ENST00000580713 CEP126Q9P2H0 1117 aa13.3□□□□□ -0.28
TOP3A-210ENST00000580713 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
TOP3A-210ENST00000580713 COL2A1P02458 1487 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-210ENST00000580713 VCANP13611 3396 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 CNGA1P29973 690 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 CAP2P40123 477 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 RTP1P59025 263 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 HERVK_113P62684 666 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 SH3D19Q5HYK7 790 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 SPTY2D1Q68D10 685 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-210ENST00000580713 CDCA7LQ96GN5 454 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 PAGR1Q9BTK6 254 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 TXNRD2Q9NNW7 524 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 ATP11BQ9Y2G3 1177 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 MYH2Q9UKX2 1941 aa13.29□□□□□ -0.28
TOP3A-210ENST00000580713 LAMA2P24043 3122 aaKnown RBP13.28□□□□□ -0.28
TOP3A-210ENST00000580713 E9PSI1 815 aa13.28□□□□□ -0.28
TOP3A-210ENST00000580713 SLFN5Q08AF3 891 aa13.28□□□□□ -0.28
TOP3A-210ENST00000580713 MTMR2Q13614 643 aa13.28□□□□□ -0.28
TOP3A-210ENST00000580713 C9orf50Q5SZB4 431 aa13.28□□□□□ -0.28
TOP3A-210ENST00000580713 MFSD14CQ5VZR4 134 aa13.28□□□□□ -0.28
TOP3A-210ENST00000580713 ATG9AQ7Z3C6 839 aa13.28□□□□□ -0.28
TOP3A-210ENST00000580713 GPR142Q7Z601 462 aa13.28□□□□□ -0.28
TOP3A-210ENST00000580713 PLEKHH3Q7Z736 793 aa13.28□□□□□ -0.28
TOP3A-210ENST00000580713 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-210ENST00000580713 APBA2Q99767 749 aa13.28□□□□□ -0.28
TOP3A-210ENST00000580713 PRDM5Q9NQX1 630 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-210ENST00000580713 MROH7-TTC4A0A0A0MT08 1334 aa13.28□□□□□ -0.28
TOP3A-210ENST00000580713 PLXNB2O15031 1838 aa13.27□□□□□ -0.28
TOP3A-210ENST00000580713 TNFRSF10AO00220 468 aa13.27□□□□□ -0.29
TOP3A-210ENST00000580713 RFX5P48382 616 aaPredicted RBP13.27□□□□□ -0.29
TOP3A-210ENST00000580713 ERVK-9P63128 1117 aa13.27□□□□□ -0.29
TOP3A-210ENST00000580713 ERVK-24P63145 666 aa13.27□□□□□ -0.29
TOP3A-210ENST00000580713 RRP1BQ14684 758 aaKnown RBP13.27□□□□□ -0.29
TOP3A-210ENST00000580713 Q3C1V9 767 aa13.27□□□□□ -0.29
TOP3A-210ENST00000580713 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
TOP3A-210ENST00000580713 USP6NLQ92738 828 aa13.27□□□□□ -0.29
TOP3A-210ENST00000580713 PORCNQ9H237 461 aa13.27□□□□□ -0.29
TOP3A-210ENST00000580713 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.29
TOP3A-210ENST00000580713 RBPJLQ9UBG7 517 aa13.27□□□□□ -0.29
TOP3A-210ENST00000580713 RAPGEFL1Q9UHV5 662 aa13.27□□□□□ -0.29
TOP3A-210ENST00000580713 LOC285556D6RIA3 1793 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 ADORA1P30542 326 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 HOXA7P31268 230 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-210ENST00000580713 BACE1P56817 501 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 RHBDL3P58872 404 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 SMAD3P84022 425 aaKnown RBP13.26□□□□□ -0.29
TOP3A-210ENST00000580713 MAP2K5Q13163 448 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 TJAP1Q5JTD0 557 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 MORN1Q5T089 497 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 WDR78Q5VTH9 848 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 CCDC102BQ68D86 513 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 ERICH6Q7L0X2 663 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 EDC3Q96F86 508 aaKnown RBP13.26□□□□□ -0.29
TOP3A-210ENST00000580713 WDR18Q9BV38 432 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 USP44Q9H0E7 712 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 DDX20Q9UHI6 824 aaKnown RBP13.26□□□□□ -0.29
TOP3A-210ENST00000580713 NDUFB9Q9Y6M9 179 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 PRUNE2Q8WUY3 3088 aa13.26□□□□□ -0.29
TOP3A-210ENST00000580713 GPR75-ASB3A0A0A6YYF3 556 aa13.25□□□□□ -0.29
TOP3A-210ENST00000580713 MSCO60682 206 aa13.25□□□□□ -0.29
TOP3A-210ENST00000580713 GLRX3O76003 335 aaKnown RBP13.25□□□□□ -0.29
TOP3A-210ENST00000580713 LDHCP07864 332 aa13.25□□□□□ -0.29
TOP3A-210ENST00000580713 ATP2B2Q01814 1243 aa13.25□□□□□ -0.29
TOP3A-210ENST00000580713 MECOMQ03112 1051 aa13.25□□□□□ -0.29
TOP3A-210ENST00000580713 RASGRF1Q13972 1273 aa13.25□□□□□ -0.29
TOP3A-210ENST00000580713 TRMT2AQ8IZ69 625 aaKnown RBP13.25□□□□□ -0.29
TOP3A-210ENST00000580713 GTF3C2Q8WUA4 911 aaPredicted RBP13.25□□□□□ -0.29
TOP3A-210ENST00000580713 LPAR1Q92633 364 aa13.25□□□□□ -0.29
TOP3A-210ENST00000580713 BADQ92934 168 aa13.25□□□□□ -0.29
TOP3A-210ENST00000580713 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
TOP3A-210ENST00000580713 C19orf81C9J6K1 198 aa13.24□□□□□ -0.29
TOP3A-210ENST00000580713 USP17L10C9JJH3 530 aa13.24□□□□□ -0.29
TOP3A-210ENST00000580713 DNM1LO00429 736 aa13.24□□□□□ -0.29
TOP3A-210ENST00000580713 CIAO1O76071 339 aa13.24□□□□□ -0.29
TOP3A-210ENST00000580713 ASNSP08243 561 aa13.24□□□□□ -0.29
TOP3A-210ENST00000580713 GSTO1P78417 241 aa13.24□□□□□ -0.29
TOP3A-210ENST00000580713 GJC2Q5T442 439 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-210ENST00000580713 TEX11Q8IYF3 940 aa13.24□□□□□ -0.29
TOP3A-210ENST00000580713 TRIM34Q9BYJ4 488 aa13.24□□□□□ -0.29
TOP3A-210ENST00000580713 HERC5Q9UII4 1024 aaKnown RBP13.24□□□□□ -0.29
TOP3A-210ENST00000580713 EYSQ5T1H1 3165 aa13.24□□□□□ -0.29
TOP3A-210ENST00000580713 SPTBN5Q9NRC6 3674 aaKnown RBP13.24□□□□□ -0.29
TOP3A-210ENST00000580713 DNAH12Q6ZR08 3092 aa13.24□□□□□ -0.29
TOP3A-210ENST00000580713 TMEM265A0A087WTH1 108 aa13.23□□□□□ -0.29
TOP3A-210ENST00000580713 KBTBD13C9JR72 458 aa13.23□□□□□ -0.29
TOP3A-210ENST00000580713 GALR2O43603 387 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-210ENST00000580713 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-210ENST00000580713 SLC39A5Q6ZMH5 540 aa13.23□□□□□ -0.29
TOP3A-210ENST00000580713 FLRT1Q9NZU1 646 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms