RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 SART3Q15020 963 aaKnown RBP7.49□□□□□ -1.21
RTTN-204ENST00000579986 LARP6Q9BRS8 491 aaKnown RBP7.49□□□□□ -1.21
RTTN-204ENST00000579986 PI4KBQ9UBF8 816 aa7.49□□□□□ -1.21
RTTN-204ENST00000579986 DDTLA6NHG4 134 aaPredicted RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 WNT10BO00744 389 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 IFIT3O14879 490 aaKnown RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 DHX16O60231 1041 aaKnown RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 CALM1P0DP23 149 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 CALM2P0DP24 149 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 CALM3P0DP25 149 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 SNHG28P0DPA3 235 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 SYT1P21579 422 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 CDC27P30260 824 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 PKP1Q13835 747 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 WTAPQ15007 396 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 TNPO1Q92973 898 aaKnown RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 MKL1Q969V6 931 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 SERPINB13Q9UIV8 391 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 MTMR6Q9Y217 621 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 ZBTB12Q9Y330 459 aaPredicted RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 MYH4Q9Y623 1939 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 PHIPQ8WWQ0 1821 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 POLR3DP05423 398 aaPredicted RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 IFNAR1P17181 557 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 SMARCA1P28370 1054 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 IQCA1Q86XH1 822 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 FBXW7Q969H0 707 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 L3MBTL3Q96JM7 780 aaPredicted RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 TEPSINQ96N21 525 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 TDRD3Q9H7E2 651 aaKnown RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 SAP30BPQ9UHR5 308 aaKnown RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 HERC5Q9UII4 1024 aaKnown RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 WDR33Q9C0J8 1336 aaKnown RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 ZBTB43O43298 467 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 TFAP4Q01664 338 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 DLGAP5Q15398 846 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 ZNF654Q8IZM8 581 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 FAM177A1Q8N128 213 aaPredicted RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 OGFOD1Q8N543 542 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 CCDC17Q96LX7 622 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 RBM28Q9NW13 759 aaKnown RBP7.48□□□□□ -1.21
RTTN-204ENST00000579986 SMC3Q9UQE7 1217 aa7.48□□□□□ -1.21
RTTN-204ENST00000579986 DOCK1Q14185 1865 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 PITPNM2Q9BZ72 1349 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 GOLGA8BA8MQT2 603 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 STX6O43752 255 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 RANBP6O60518 1105 aaKnown RBP7.47□□□□□ -1.21
RTTN-204ENST00000579986 FMNL1O95466 1100 aaPredicted RBP7.47□□□□□ -1.21
RTTN-204ENST00000579986 PDCP20941 246 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 GMPSP49915 693 aaPredicted RBP7.47□□□□□ -1.21
RTTN-204ENST00000579986 EIF6P56537 245 aaKnown RBP7.47□□□□□ -1.21
RTTN-204ENST00000579986 FANCBQ8NB91 859 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 TMEM87AQ8NBN3 555 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 SLC44A5Q8NCS7 719 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 UBAC1Q9BSL1 405 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 GPRC5DQ9NZD1 345 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 SLC12A7Q9Y666 1083 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 MYH6P13533 1939 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 PTPDC1A2A3K4 754 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 NMT2O60551 498 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 JAK2O60674 1132 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 PRDM1O75626 825 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 ZSCAN22P10073 491 aaPredicted RBP7.47□□□□□ -1.21
RTTN-204ENST00000579986 GUCY1A2P33402 732 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 METAP2P50579 478 aaKnown RBP eCLIP7.47□□□□□ -1.21
RTTN-204ENST00000579986 GRM4Q14833 912 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 PPP4R3BQ5MIZ7 849 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 SPRYD3Q8NCJ5 442 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 MTMR4Q9NYA4 1195 aa7.47□□□□□ -1.21
RTTN-204ENST00000579986 SHTN1A0MZ66 631 aa7.46□□□□□ -1.21
RTTN-204ENST00000579986 ERICH2A1L162 156 aa7.46□□□□□ -1.21
RTTN-204ENST00000579986 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.21
RTTN-204ENST00000579986 CCDC69A6NI79 296 aa7.46□□□□□ -1.21
RTTN-204ENST00000579986 HLA-DOAP06340 250 aa7.46□□□□□ -1.21
RTTN-204ENST00000579986 FAM47AQ5JRC9 791 aa7.46□□□□□ -1.21
RTTN-204ENST00000579986 IFIT1BQ5T764 474 aaKnown RBP7.46□□□□□ -1.21
RTTN-204ENST00000579986 NOL8Q76FK4 1167 aaKnown RBP7.46□□□□□ -1.21
RTTN-204ENST00000579986 SIAH1Q8IUQ4 282 aa7.46□□□□□ -1.21
RTTN-204ENST00000579986 CRACR2BQ8N4Y2 399 aaPredicted RBP7.46□□□□□ -1.21
RTTN-204ENST00000579986 NCOA5Q9HCD5 579 aaKnown RBP7.46□□□□□ -1.21
RTTN-204ENST00000579986 GINM1Q9NU53 330 aa7.46□□□□□ -1.21
RTTN-204ENST00000579986 PPP1R1BQ9UD71 204 aaPredicted RBP7.46□□□□□ -1.21
RTTN-204ENST00000579986 SSC5DA1L4H1 1573 aa7.46□□□□□ -1.21
RTTN-204ENST00000579986 CCDC196A0A1B0GTZ2 297 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 CDKL5O76039 1030 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 TMTC3Q6ZXV5 915 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 ZKSCAN3Q9BRR0 538 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 RNF26Q9BY78 433 aaPredicted RBP7.46□□□□□ -1.22
RTTN-204ENST00000579986 MAD2L2Q9UI95 211 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 PPP2R3BQ9Y5P8 575 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 GOLGB1Q14789 3259 aaKnown RBP7.46□□□□□ -1.22
RTTN-204ENST00000579986 PARP14Q460N5 1801 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 TSPY2A6NKD2 308 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 PHF20L1A8MW92 1017 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 PRPF3O43395 683 aaKnown RBP7.46□□□□□ -1.22
RTTN-204ENST00000579986 F13A1P00488 732 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 EGFRP00533 1210 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 HSP90AA1P07900 732 aaKnown RBP7.46□□□□□ -1.22
RTTN-204ENST00000579986 TSPY3P0CV98 308 aa7.46□□□□□ -1.22
RTTN-204ENST00000579986 TSPY8P0CW00 308 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms