RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 DBNLQ9UJU6 430 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-210ENST00000579308 C19orf81C9J6K1 198 aa13.05□□□□□ -0.32
CSNK1D-210ENST00000579308 HMGCRP04035 888 aa13.05□□□□□ -0.32
CSNK1D-210ENST00000579308 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-210ENST00000579308 TRIM32Q13049 653 aa13.05□□□□□ -0.32
CSNK1D-210ENST00000579308 POTEEQ6S8J3 1075 aa13.05□□□□□ -0.32
CSNK1D-210ENST00000579308 EAF2Q96CJ1 260 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-210ENST00000579308 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.05□□□□□ -0.322e-11■■■■■ 52.2
CSNK1D-210ENST00000579308 TXNRD2Q9NNW7 524 aa13.05□□□□□ -0.32
CSNK1D-210ENST00000579308 RBPJLQ9UBG7 517 aa13.05□□□□□ -0.32
CSNK1D-210ENST00000579308 TAOK2Q9UL54 1235 aa13.05□□□□□ -0.32
CSNK1D-210ENST00000579308 DOCK1Q14185 1865 aa13.05□□□□□ -0.32
CSNK1D-210ENST00000579308 USP17L10C9JJH3 530 aa13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 EVI5O60447 810 aa13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 PEX10O60683 326 aa13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 RLBP1P12271 317 aa13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 DYNLL1P63167 89 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 OS9Q13438 667 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 GPRC5AQ8NFJ5 357 aa13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 PAWRQ96IZ0 340 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 C1orf115Q9H7X2 142 aa13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 EMILIN3Q9NT22 766 aa13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 TLR7Q9NYK1 1049 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 TMOD4Q9NZQ9 345 aa13.04□□□□□ -0.32
CSNK1D-210ENST00000579308 PTPRFP10586 1907 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 GDF11O95390 407 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 XRCC5P13010 732 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 CYP7A1P22680 504 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 HERVK_113P62684 666 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 Q3C1V9 767 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 MAP3K21Q5TCX8 1036 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 TATDN1Q6P1N9 297 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 NECAB2Q7Z6G3 386 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 DIS3LQ8TF46 1054 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 USP6NLQ92738 828 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 CCDC8Q9H0W5 538 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 SAP30BPQ9UHR5 308 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 ZBTB21Q9ULJ3 1066 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 RPTORQ8N122 1335 aa13.03□□□□□ -0.32
CSNK1D-210ENST00000579308 MGAMO43451 1857 aa13.02□□□□□ -0.32
CSNK1D-210ENST00000579308 A0A1W2PPC1 479 aa13.02□□□□□ -0.33
CSNK1D-210ENST00000579308 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-210ENST00000579308 TRIB2Q92519 343 aa13.02□□□□□ -0.33
CSNK1D-210ENST00000579308 HMX1Q9NP08 348 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-210ENST00000579308 OGDHLQ9ULD0 1010 aa13.02□□□□□ -0.33
CSNK1D-210ENST00000579308 GH2P01242 217 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 HLA-DOAP06340 250 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 MAPK4P31152 587 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 MORN1Q5T089 497 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 USP17L2Q6R6M4 530 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 C12orf42Q96LP6 360 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 TRIM34Q9BYJ4 488 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 ANTXR1Q9H6X2 564 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 STAP2Q9UGK3 403 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 LOC285556D6RIA3 1793 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 DOCK3Q8IZD9 2030 aa13.01□□□□□ -0.33
CSNK1D-210ENST00000579308 IDH1O75874 414 aaKnown RBP13□□□□□ -0.33
CSNK1D-210ENST00000579308 CYP2B6P20813 491 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 ERVK-9P63128 1117 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 ERVK-24P63145 666 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 CEP85Q6P2H3 762 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 ITPRIPQ8IWB1 547 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 FTSJ3Q8IY81 847 aaKnown RBP13□□□□□ -0.33
CSNK1D-210ENST00000579308 MAGEB6Q8N7X4 407 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 MIGA1Q8NAN2 632 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 GTF3C2Q8WUA4 911 aaPredicted RBP13□□□□□ -0.33
CSNK1D-210ENST00000579308 SOCS4Q8WXH5 440 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 NBPF3Q9H094 633 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 EHD4Q9H223 541 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 PORCNQ9H237 461 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 NDUFB9Q9Y6M9 179 aa13□□□□□ -0.33
CSNK1D-210ENST00000579308 CNMDO75829 334 aa12.99□□□□□ -0.33
CSNK1D-210ENST00000579308 BMP8BP34820 402 aa12.99□□□□□ -0.33
CSNK1D-210ENST00000579308 LHX8Q68G74 356 aa12.99□□□□□ -0.33
CSNK1D-210ENST00000579308 GPR142Q7Z601 462 aa12.99□□□□□ -0.33
CSNK1D-210ENST00000579308 TRMT44Q8IYL2 757 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-210ENST00000579308 GDF15Q99988 308 aa12.99□□□□□ -0.33
CSNK1D-210ENST00000579308 RIOK1Q9BRS2 568 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-210ENST00000579308 SERPINB13Q9UIV8 391 aa12.99□□□□□ -0.33
CSNK1D-210ENST00000579308 SIPA1L1O43166 1804 aa12.99□□□□□ -0.33
CSNK1D-210ENST00000579308 SOX1O00570 391 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 USP5P45974 858 aa12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 PLCD1P51178 756 aa12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 CACNB2Q08289 660 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 MAP3K12Q12852 859 aa12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 CATSPERGQ6ZRH7 1159 aa12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 PLEKHH3Q7Z736 793 aa12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 ACER1Q8TDN7 264 aa12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 KIAA1683Q9H0B3 1180 aa12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 C11orf49Q9H6J7 331 aa12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 RABGAP1Q9Y3P9 1069 aa12.98□□□□□ -0.33
CSNK1D-210ENST00000579308 USP17L15C9J2P7 530 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 USP17L13C9JLJ4 530 aa12.97□□□□□ -0.33
CSNK1D-210ENST00000579308 USP17L11C9JVI0 530 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms