RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 GDF15Q99988 308 aa15.47■□□□□ 0.07
CDK5RAP3-212ENST00000579175 PAGR1Q9BTK6 254 aa15.47■□□□□ 0.07
CDK5RAP3-212ENST00000579175 WDR18Q9BV38 432 aa15.47■□□□□ 0.07
CDK5RAP3-212ENST00000579175 MORF4L1Q9UBU8 362 aa15.47■□□□□ 0.07
CDK5RAP3-212ENST00000579175 COL2A1P02458 1487 aaPredicted RBP15.46■□□□□ 0.07
CDK5RAP3-212ENST00000579175 ZKSCAN1P17029 563 aaPredicted RBP15.46■□□□□ 0.07
CDK5RAP3-212ENST00000579175 BMP8BP34820 402 aa15.46■□□□□ 0.07
CDK5RAP3-212ENST00000579175 HERVK_113P62684 666 aa15.46■□□□□ 0.07
CDK5RAP3-212ENST00000579175 DEFB123Q8N688 67 aa15.46■□□□□ 0.07
CDK5RAP3-212ENST00000579175 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.07
CDK5RAP3-212ENST00000579175 SAP30BPQ9UHR5 308 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-212ENST00000579175 PALD1Q9ULE6 856 aa15.46■□□□□ 0.07
CDK5RAP3-212ENST00000579175 LOC285556D6RIA3 1793 aa15.46■□□□□ 0.07
CDK5RAP3-212ENST00000579175 SZT2Q5T011 3432 aa15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 ALPK3Q96L96 1907 aa15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 PNMA6EA0A0J9YXQ4 647 aa15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 MAPK4P31152 587 aa15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 HOXA7P31268 230 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 HNRNPUQ00839 825 aaKnown RBP eCLIP15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 WDR78Q5VTH9 848 aa15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 TRMT44Q8IYL2 757 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 SOCS4Q8WXH5 440 aa15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 UBE2OQ9C0C9 1292 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 TXNRD2Q9NNW7 524 aa15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 OGDHLQ9ULD0 1010 aa15.45■□□□□ 0.06
CDK5RAP3-212ENST00000579175 RGS2P41220 211 aa15.44■□□□□ 0.06
CDK5RAP3-212ENST00000579175 MAGEA10P43363 369 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-212ENST00000579175 JAG1P78504 1218 aa15.44■□□□□ 0.06
CDK5RAP3-212ENST00000579175 CACNB2Q08289 660 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-212ENST00000579175 ZYXQ15942 572 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-212ENST00000579175 Q3C1V9 767 aa15.44■□□□□ 0.06
CDK5RAP3-212ENST00000579175 ATF7IPQ6VMQ6 1270 aa15.44■□□□□ 0.06
CDK5RAP3-212ENST00000579175 RBPJLQ9UBG7 517 aa15.44■□□□□ 0.06
CDK5RAP3-212ENST00000579175 FLT1P17948 1338 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 ZBED9Q6R2W3 1325 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 RANBP2P49792 3224 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 XRCC5P13010 732 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 ERVK-9P63128 1117 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 ERVK-24P63145 666 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 SHROOM1Q2M3G4 852 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 USP17L2Q6R6M4 530 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 Q7L0L9 218 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 GPR142Q7Z601 462 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 PLEKHH3Q7Z736 793 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 TDHQ8IZJ6 230 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 FEZ1Q99689 392 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 DBNDD2Q9BQY9 259 aa15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 DDX60LQ5H9U9 1706 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-212ENST00000579175 CCND3P30281 292 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 USP5P45974 858 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 MNX1P50219 401 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 PPP4CP60510 307 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 CCL14Q16627 93 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 TNNI3KQ59H18 835 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 MAP3K21Q5TCX8 1036 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 GTF3C2Q8WUA4 911 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 PORCNQ9H237 461 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 DNAJC18Q9H819 358 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 GINM1Q9NU53 330 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 ZBTB21Q9ULJ3 1066 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 TNNQ9UQP3 1299 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 NDUFB9Q9Y6M9 179 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 FPGT-TNNI3KV9GXZ4 949 aa15.42■□□□□ 0.06
CDK5RAP3-212ENST00000579175 SURF6O75683 361 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-212ENST00000579175 GLRX3O76003 335 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-212ENST00000579175 GH2P01242 217 aa15.41■□□□□ 0.06
CDK5RAP3-212ENST00000579175 CYP2E1P05181 493 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-212ENST00000579175 TRIM27P14373 513 aa15.41■□□□□ 0.06
CDK5RAP3-212ENST00000579175 CYP7A1P22680 504 aa15.41■□□□□ 0.06
CDK5RAP3-212ENST00000579175 ZAP70P43403 619 aa15.41■□□□□ 0.06
CDK5RAP3-212ENST00000579175 DYNLL1P63167 89 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-212ENST00000579175 GPR153Q6NV75 609 aa15.41■□□□□ 0.06
CDK5RAP3-212ENST00000579175 ADGRA1Q86SQ6 560 aa15.41■□□□□ 0.06
CDK5RAP3-212ENST00000579175 PLXNB2O15031 1838 aa15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 BCAR3O75815 825 aa15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 IDH1O75874 414 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 CNGA1P29973 690 aa15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 CCNA1P78396 465 aa15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 MDM2Q00987 491 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 RAB3GAP1Q15042 981 aa15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 LRIT3Q3SXY7 679 aa15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 EDC3Q96F86 508 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 APBA2Q99767 749 aa15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 GPR108Q9NPR9 543 aa15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 EMILIN3Q9NT22 766 aa15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 PFASO15067 1338 aa15.4■□□□□ 0.06
CDK5RAP3-212ENST00000579175 USP17L15C9J2P7 530 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 USP17L13C9JLJ4 530 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 USP17L11C9JVI0 530 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 USP17L18D6R9N7 530 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 USP17L22D6RA61 530 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 USP17L17D6RBQ6 530 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 USP17L19D6RCP7 530 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 USP17L20D6RJB6 530 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 USP17L24Q0WX57 530 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 MORN1Q5T089 497 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 MFSD14CQ5VZR4 134 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 MIGA1Q8NAN2 632 aa15.39■□□□□ 0.05
CDK5RAP3-212ENST00000579175 SENP6Q9GZR1 1112 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms