RNA–Protein interactions for RNA: ENST00000579148.1

MIR3940-201, Transcript of microRNA 3940, humanhuman

BASIC

Gene MIR3940, Length 102 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3940-201ENST00000579148 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.2
MIR3940-201ENST00000579148 LLPHQ9BRT6 129 aaKnown RBP16.27■□□□□ 0.2
MIR3940-201ENST00000579148 TRIM34Q9BYJ4 488 aa16.27■□□□□ 0.2
MIR3940-201ENST00000579148 VEZTQ9HBM0 779 aa16.27■□□□□ 0.2
MIR3940-201ENST00000579148 TNKSO95271 1327 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 KLF18A0A0U1RQI7 1052 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 SHTN1A0MZ66 631 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 TBC1D12O60347 775 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 LARGE1O95461 756 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 PPP2R5BQ15173 497 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 TBC1D10BQ4KMP7 808 aaPredicted RBP16.26■□□□□ 0.19
MIR3940-201ENST00000579148 NFXL1Q6ZNB6 911 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 SAMD7Q7Z3H4 446 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 APOBEC3FQ8IUX4 373 aaKnown RBP16.26■□□□□ 0.19
MIR3940-201ENST00000579148 NKX2-3Q8TAU0 364 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 CSRNP1Q96S65 589 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 ADARB2Q9NS39 739 aaKnown RBP16.26■□□□□ 0.19
MIR3940-201ENST00000579148 SLC12A7Q9Y666 1083 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 CDK5RAP2Q96SN8 1893 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 GOLGB1Q14789 3259 aaKnown RBP16.26■□□□□ 0.19
MIR3940-201ENST00000579148 ECM29Q5VYK3 1845 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 NID2Q14112 1375 aa16.26■□□□□ 0.19
MIR3940-201ENST00000579148 DDNO94850 711 aaPredicted RBP16.25■□□□□ 0.19
MIR3940-201ENST00000579148 CALM1P0DP23 149 aa16.25■□□□□ 0.19
MIR3940-201ENST00000579148 CALM2P0DP24 149 aa16.25■□□□□ 0.19
MIR3940-201ENST00000579148 CALM3P0DP25 149 aa16.25■□□□□ 0.19
MIR3940-201ENST00000579148 PDIA4P13667 645 aaKnown RBP16.25■□□□□ 0.19
MIR3940-201ENST00000579148 SHMT1P34896 483 aa16.25■□□□□ 0.19
MIR3940-201ENST00000579148 DDIT3P35638 169 aa16.25■□□□□ 0.19
MIR3940-201ENST00000579148 FAM47AQ5JRC9 791 aa16.25■□□□□ 0.19
MIR3940-201ENST00000579148 IFIT1BQ5T764 474 aaKnown RBP16.25■□□□□ 0.19
MIR3940-201ENST00000579148 RBM26Q5T8P6 1007 aaKnown RBP16.25■□□□□ 0.19
MIR3940-201ENST00000579148 APOA5Q6Q788 366 aa16.25■□□□□ 0.19
MIR3940-201ENST00000579148 ENAHQ8N8S7 591 aaPredicted RBP16.25■□□□□ 0.19
MIR3940-201ENST00000579148 SLC44A5Q8NCS7 719 aa16.25■□□□□ 0.19
MIR3940-201ENST00000579148 LARP6Q9BRS8 491 aaKnown RBP16.25■□□□□ 0.19
MIR3940-201ENST00000579148 GPHNQ9NQX3 736 aaPredicted RBP16.25■□□□□ 0.19
MIR3940-201ENST00000579148 BRPF3Q9ULD4 1205 aa16.25■□□□□ 0.19
MIR3940-201ENST00000579148 BAZ2AQ9UIF9 1905 aaKnown RBP16.25■□□□□ 0.19
MIR3940-201ENST00000579148 SBF1O95248 1867 aa16.25■□□□□ 0.19
MIR3940-201ENST00000579148 GOLGA8BA8MQT2 603 aa16.24■□□□□ 0.19
MIR3940-201ENST00000579148 ZBTB43O43298 467 aa16.24■□□□□ 0.19
MIR3940-201ENST00000579148 DDAH1O94760 285 aa16.24■□□□□ 0.19
MIR3940-201ENST00000579148 NOVP48745 357 aa16.24■□□□□ 0.19
MIR3940-201ENST00000579148 TATDN1Q6P1N9 297 aa16.24■□□□□ 0.19
MIR3940-201ENST00000579148 CCDC83Q8IWF9 413 aa16.24■□□□□ 0.19
MIR3940-201ENST00000579148 HOOK2Q96ED9 719 aa16.24■□□□□ 0.19
MIR3940-201ENST00000579148 ZKSCAN3Q9BRR0 538 aa16.24■□□□□ 0.19
MIR3940-201ENST00000579148 SMC3Q9UQE7 1217 aa16.24■□□□□ 0.19
MIR3940-201ENST00000579148 PPP2R3BQ9Y5P8 575 aa16.24■□□□□ 0.19
MIR3940-201ENST00000579148 PITPNM2Q9BZ72 1349 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 CCDC196A0A1B0GTZ2 297 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 GLTPD2A6NH11 291 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 EGFRP00533 1210 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 MAP3K10Q02779 954 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 RASA3Q14644 834 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 CATIPQ7Z7H3 387 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 NECAB1Q8N987 351 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 CHMP5Q9NZZ3 219 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 PGAP2Q9UHJ9 254 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 HACL1Q9UJ83 578 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 HPS5Q9UPZ3 1129 aa16.23■□□□□ 0.19
MIR3940-201ENST00000579148 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 CDKL5O76039 1030 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 EPS15P42566 896 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 METAP2P50579 478 aaKnown RBP eCLIP16.22■□□□□ 0.19
MIR3940-201ENST00000579148 HMGN5P82970 282 aaKnown RBP16.22■□□□□ 0.19
MIR3940-201ENST00000579148 ST3GAL1Q11201 340 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 SCRN1Q12765 414 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 STK3Q13188 491 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 CPLX2Q6PUV4 134 aaKnown RBP16.22■□□□□ 0.19
MIR3940-201ENST00000579148 USP50Q70EL3 339 aaPredicted RBP16.22■□□□□ 0.19
MIR3940-201ENST00000579148 ZNF654Q8IZM8 581 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 MAP3K14Q99558 947 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 DNAJC18Q9H819 358 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 IL17RBQ9NRM6 502 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
MIR3940-201ENST00000579148 KIF3AQ9Y496 699 aa16.22■□□□□ 0.19
MIR3940-201ENST00000579148 MYH1P12882 1939 aa16.21■□□□□ 0.19
MIR3940-201ENST00000579148 IGKV6D-41A0A0C4DH26 115 aa16.21■□□□□ 0.19
MIR3940-201ENST00000579148 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
MIR3940-201ENST00000579148 NUCB2P80303 420 aa16.21■□□□□ 0.19
MIR3940-201ENST00000579148 CERKLQ49MI3 558 aaPredicted RBP16.21■□□□□ 0.19
MIR3940-201ENST00000579148 RCSD1Q6JBY9 416 aa16.21■□□□□ 0.19
MIR3940-201ENST00000579148 TRPM4Q8TD43 1214 aa16.21■□□□□ 0.19
MIR3940-201ENST00000579148 TMEM39BQ9GZU3 492 aa16.21■□□□□ 0.19
MIR3940-201ENST00000579148 KAT14Q9H8E8 782 aa16.21■□□□□ 0.19
MIR3940-201ENST00000579148 SENP2Q9HC62 589 aa16.21■□□□□ 0.19
MIR3940-201ENST00000579148 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
MIR3940-201ENST00000579148 GOLGA8AA7E2F4 631 aa16.2■□□□□ 0.18
MIR3940-201ENST00000579148 TOP1P11387 765 aaKnown RBP16.2■□□□□ 0.18
MIR3940-201ENST00000579148 AKR1B1P15121 316 aa16.2■□□□□ 0.18
MIR3940-201ENST00000579148 PDCP20941 246 aa16.2■□□□□ 0.18
MIR3940-201ENST00000579148 ANGEL2Q5VTE6 544 aaKnown RBP16.2■□□□□ 0.18
MIR3940-201ENST00000579148 TMEM179Q6ZVK1 233 aa16.2■□□□□ 0.18
MIR3940-201ENST00000579148 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
MIR3940-201ENST00000579148 ZC3H15Q8WU90 426 aaKnown RBP16.2■□□□□ 0.18
MIR3940-201ENST00000579148 TEPSINQ96N21 525 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms