RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CYP2C8P10632 490 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 CYP2D6P10635 497 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 OSBPP22059 807 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 TDO2P48775 406 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 HMGCS2P54868 508 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 ATP2B2Q01814 1243 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 MTMR2Q13614 643 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 RRP1BQ14684 758 aaKnown RBP7.85□□□□□ -1.15
TRAF4-213ENST00000578917 PRRT2Q7Z6L0 340 aaPredicted RBP7.85□□□□□ -1.15
TRAF4-213ENST00000578917 STK11IPQ8N1F8 1099 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 CD99L2Q8TCZ2 262 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 STRBPQ96SI9 672 aaKnown RBP7.85□□□□□ -1.15
TRAF4-213ENST00000578917 EHD4Q9H223 541 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 EFCC1Q9HA90 598 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 MKNK2Q9HBH9 465 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 STAP2Q9UGK3 403 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 CPA4Q9UI42 421 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 PNMA3Q9UL41 463 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 ZBTB21Q9ULJ3 1066 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 TRIM17Q9Y577 477 aa7.85□□□□□ -1.15
TRAF4-213ENST00000578917 ARAP2Q8WZ64 1704 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 COL2A1P02458 1487 aaPredicted RBP7.84□□□□□ -1.15
TRAF4-213ENST00000578917 CYP2D7A0A087X1C5 515 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 C19orf81C9J6K1 198 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 PATL2C9JE40 543 aaKnown RBP7.84□□□□□ -1.15
TRAF4-213ENST00000578917 GPAA1O43292 621 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 RAD21O60216 631 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 FMNL1O95466 1100 aaPredicted RBP7.84□□□□□ -1.15
TRAF4-213ENST00000578917 SLC3A2P08195 630 aaKnown RBP7.84□□□□□ -1.15
TRAF4-213ENST00000578917 BACE1P56817 501 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 IRX3P78415 501 aaPredicted RBP7.84□□□□□ -1.15
TRAF4-213ENST00000578917 ZYXQ15942 572 aaKnown RBP7.84□□□□□ -1.15
TRAF4-213ENST00000578917 C12orf60Q5U649 245 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 GPAT2Q6NUI2 795 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 TATDN1Q6P1N9 297 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 CTR9Q6PD62 1173 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 METTL16Q86W50 562 aaKnown RBP7.84□□□□□ -1.15
TRAF4-213ENST00000578917 CCAR1Q8IX12 1150 aaKnown RBP7.84□□□□□ -1.15
TRAF4-213ENST00000578917 PROCA1Q8NCQ7 364 aaPredicted RBP7.84□□□□□ -1.15
TRAF4-213ENST00000578917 OSBP2Q969R2 916 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 DYNLL2Q96FJ2 89 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 WDR18Q9BV38 432 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 ZNF287Q9HBT7 754 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 SWAP70Q9UH65 585 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 AGTPBP1Q9UPW5 1226 aa7.84□□□□□ -1.15
TRAF4-213ENST00000578917 MYH2Q9UKX2 1941 aa7.84□□□□□ -1.16
TRAF4-213ENST00000578917 GSG1L2A8MUP6 293 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 M0R2C6 588 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 NEFLP07196 543 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 HOXD10P28358 340 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 SHMT1P34896 483 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 PSMC4P43686 418 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 CDK8P49336 464 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 USP14P54578 494 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 JAG1P78504 1218 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 SHROOM1Q2M3G4 852 aaPredicted RBP7.83□□□□□ -1.16
TRAF4-213ENST00000578917 GIMAP6Q6P9H5 292 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 ZNF444Q8N0Y2 327 aaPredicted RBP7.83□□□□□ -1.16
TRAF4-213ENST00000578917 CCDC17Q96LX7 622 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 SEC62Q99442 399 aaKnown RBP7.83□□□□□ -1.16
TRAF4-213ENST00000578917 NAPBQ9H115 298 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 DNAJC18Q9H819 358 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 DIAPH3Q9NSV4 1193 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 ARPP21Q9UBL0 812 aaPredicted RBP7.83□□□□□ -1.16
TRAF4-213ENST00000578917 SLC45A1Q9Y2W3 748 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 AK9Q5TCS8 1911 aa7.83□□□□□ -1.16
TRAF4-213ENST00000578917 MYH13Q9UKX3 1938 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 MFAP1P55081 439 aaKnown RBP7.82□□□□□ -1.16
TRAF4-213ENST00000578917 LACTBP83111 547 aaPredicted RBP7.82□□□□□ -1.16
TRAF4-213ENST00000578917 PDE4BQ07343 736 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 MOGSQ13724 837 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 SEPT2Q15019 361 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 ZMYM1Q5SVZ6 1142 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 TREML2Q5T2D2 321 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 FBXO46Q6PJ61 603 aaPredicted RBP7.82□□□□□ -1.16
TRAF4-213ENST00000578917 C17orf99Q6UX52 265 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 TMEM179Q6ZVK1 233 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 OTOP1Q7RTM1 612 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 NBPF11Q86T75 865 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 PLEKHM2Q8IWE5 1019 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 IFNL3Q8IZI9 196 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 ANKRD13CQ8N6S4 541 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 SLC44A5Q8NCS7 719 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 ASCC2Q9H1I8 757 aaPredicted RBP7.82□□□□□ -1.16
TRAF4-213ENST00000578917 SH2D4AQ9H788 454 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 ARHGEF10LQ9HCE6 1279 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 CWC22Q9HCG8 908 aaKnown RBP7.82□□□□□ -1.16
TRAF4-213ENST00000578917 HELLSQ9NRZ9 838 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 BIN2Q9UBW5 565 aaPredicted RBP7.82□□□□□ -1.16
TRAF4-213ENST00000578917 TAOK2Q9UL54 1235 aa7.82□□□□□ -1.16
TRAF4-213ENST00000578917 ECM29Q5VYK3 1845 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 USP17L15C9J2P7 530 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 USP17L13C9JLJ4 530 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 USP17L11C9JVI0 530 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 USP17L18D6R9N7 530 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 USP17L22D6RA61 530 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 USP17L17D6RBQ6 530 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 USP17L19D6RCP7 530 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 USP17L20D6RJB6 530 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms