RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 SIPA1L1O43166 1804 aa16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 PAPPA2Q9BXP8 1791 aa16.41■□□□□ 0.22
CSNK1D-209ENST00000578904 PPP1R12BO60237 982 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-209ENST00000578904 PLCD1P51178 756 aa16.41■□□□□ 0.22
CSNK1D-209ENST00000578904 C12orf60Q5U649 245 aa16.41■□□□□ 0.22
CSNK1D-209ENST00000578904 MIGA2Q7L4E1 593 aa16.41■□□□□ 0.22
CSNK1D-209ENST00000578904 EHD4Q9H223 541 aa16.41■□□□□ 0.22
CSNK1D-209ENST00000578904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.41■□□□□ 0.224e-7■■■■■ 29.6
CSNK1D-209ENST00000578904 GBA2Q9HCG7 927 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-209ENST00000578904 HERC5Q9UII4 1024 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-209ENST00000578904 SERPINB13Q9UIV8 391 aa16.41■□□□□ 0.22
CSNK1D-209ENST00000578904 ERICH2A1L162 156 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 FAM196BA6NMK8 535 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 EVX2Q03828 476 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 CTDSPL2Q05D32 466 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 ARMC9Q7Z3E5 817 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 C2orf69Q8N8R5 385 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 TMEM87BQ96K49 555 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 ZNF341Q9BYN7 854 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 ANGEL1Q9UNK9 670 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 FZD1Q9UP38 647 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 LIMCH1Q9UPQ0 1083 aa16.4■□□□□ 0.22
CSNK1D-209ENST00000578904 ROBO3Q96MS0 1386 aa16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 TBC1D12O60347 775 aa16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 SLURP2P0DP57 97 aa16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 IREB2P48200 963 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 FKBP1BP68106 108 aa16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 CCDC178Q5BJE1 867 aa16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 STOX1Q6ZVD7 989 aa16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 TBC1D10CQ8IV04 446 aa16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 FOXP4Q8IVH2 680 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 STK11IPQ8N1F8 1099 aa16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 TTC14Q96N46 770 aa16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 SH2B1Q9NRF2 756 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-209ENST00000578904 ORC4O43929 436 aa16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 CST9Q5W186 159 aa16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 MOB2Q70IA6 237 aa16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 IQCA1Q86XH1 822 aa16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 ZNF444Q8N0Y2 327 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 TMTC2Q8N394 836 aa16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 FBXL16Q8N461 479 aa16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 DYNLL2Q96FJ2 89 aa16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 WRNIP1Q96S55 665 aa16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 DNAJC18Q9H819 358 aa16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 SWAP70Q9UH65 585 aa16.38■□□□□ 0.21
CSNK1D-209ENST00000578904 TMEM88BA6NKF7 163 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 B4E1Z4 1266 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 SMIM22K7EJ46 135 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 PRC1O43663 620 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 USP2O75604 605 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 FGRP09769 529 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 AK2P54819 239 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 EXOSC10Q01780 885 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 MAP3K10Q02779 954 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 GABPAQ06546 454 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 Q6ZUG5 572 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 C16orf86Q6ZW13 317 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 METTL16Q86W50 562 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 MB21D2Q8IYB1 491 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 SLC44A5Q8NCS7 719 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 UBAC1Q9BSL1 405 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 OTOFQ9HC10 1997 aa16.37■□□□□ 0.21
CSNK1D-209ENST00000578904 RANBP6O60518 1105 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-209ENST00000578904 MAP3K11Q16584 847 aa16.36■□□□□ 0.21
CSNK1D-209ENST00000578904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.36■□□□□ 0.21
CSNK1D-209ENST00000578904 NBPF3Q9H094 633 aa16.36■□□□□ 0.21
CSNK1D-209ENST00000578904 ABT1Q9ULW3 272 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-209ENST00000578904 TAF6LQ9Y6J9 622 aa16.36■□□□□ 0.21
CSNK1D-209ENST00000578904 TSPY2A6NKD2 308 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 UBE2Q2LH0YL09 131 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 KDM4AO75164 1064 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 CPA1P15085 419 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 INPP5BP32019 993 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 SHMT1P34896 483 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 CDK8P49336 464 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 PPP4R3BQ5MIZ7 849 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 SYNE3Q6ZMZ3 975 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 ANKRD13AQ8IZ07 590 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 ZNF112Q9UJU3 913 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 CSADQ9Y600 493 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 NEDD4P46934 1319 aa16.35■□□□□ 0.21
CSNK1D-209ENST00000578904 PHF20L1A8MW92 1017 aa16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 IFIT3O14879 490 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 GDF11O95390 407 aa16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 HUNKP57058 714 aa16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 MAP3K9P80192 1104 aa16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 CERKLQ49MI3 558 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 TATDN1Q6P1N9 297 aa16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 TMX3Q96JJ7 454 aa16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 ZSWIM5Q9P217 1185 aa16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 TLL2Q9Y6L7 1015 aa16.34■□□□□ 0.21
CSNK1D-209ENST00000578904 DOCK1Q14185 1865 aa16.33■□□□□ 0.21
CSNK1D-209ENST00000578904 PRDM1O75626 825 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms