RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 GNL2Q13823 731 aaKnown RBP32.1■■■□□ 2.73
LIMD2-203ENST00000578067 LINC00301Q8NCQ3 95 aa32.1■■■□□ 2.73
LIMD2-203ENST00000578067 DYNLL2Q96FJ2 89 aa32.1■■■□□ 2.73
LIMD2-203ENST00000578067 NR1I2O75469 434 aa32.1■■■□□ 2.73
LIMD2-203ENST00000578067 U2AF2P26368 475 aaKnown RBP eCLIP32.1■■■□□ 2.73
LIMD2-203ENST00000578067 ME1P48163 572 aa32.1■■■□□ 2.73
LIMD2-203ENST00000578067 RHBDL3P58872 404 aa32.1■■■□□ 2.73
LIMD2-203ENST00000578067 RNF214Q8ND24 703 aa32.1■■■□□ 2.73
LIMD2-203ENST00000578067 FBXW7Q969H0 707 aa32.1■■■□□ 2.73
LIMD2-203ENST00000578067 FUCA2Q9BTY2 467 aa32.1■■■□□ 2.73
LIMD2-203ENST00000578067 RNF26Q9BY78 433 aaPredicted RBP32.1■■■□□ 2.73
LIMD2-203ENST00000578067 TAOK2Q9UL54 1235 aa32.1■■■□□ 2.73
LIMD2-203ENST00000578067 CCDC173Q0VFZ6 552 aa32.09■■■□□ 2.73
LIMD2-203ENST00000578067 DOK7Q18PE1 504 aa32.09■■■□□ 2.73
LIMD2-203ENST00000578067 MKNK2Q9HBH9 465 aa32.09■■■□□ 2.73
LIMD2-203ENST00000578067 TFAP4Q01664 338 aa32.09■■■□□ 2.73
LIMD2-203ENST00000578067 STK38Q15208 465 aa32.09■■■□□ 2.73
LIMD2-203ENST00000578067 MAP3K11Q16584 847 aa32.09■■■□□ 2.73
LIMD2-203ENST00000578067 CCAR1Q8IX12 1150 aaKnown RBP32.09■■■□□ 2.73
LIMD2-203ENST00000578067 KCNG4Q8TDN1 519 aa32.09■■■□□ 2.73
LIMD2-203ENST00000578067 CLSTN2Q9H4D0 955 aa32.09■■■□□ 2.73
LIMD2-203ENST00000578067 SAP30BPQ9UHR5 308 aaKnown RBP32.09■■■□□ 2.73
LIMD2-203ENST00000578067 G3V3G9 751 aa32.08■■■□□ 2.73
LIMD2-203ENST00000578067 DCAF8Q5TAQ9 597 aa32.08■■■□□ 2.73
LIMD2-203ENST00000578067 TNMDQ9H2S6 317 aa32.08■■■□□ 2.73
LIMD2-203ENST00000578067 PLCD1P51178 756 aa32.07■■■□□ 2.72
LIMD2-203ENST00000578067 PPP1R9BQ96SB3 815 aa32.07■■■□□ 2.72
LIMD2-203ENST00000578067 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.07■■■□□ 2.72
LIMD2-203ENST00000578067 DAGLAQ9Y4D2 1042 aa32.07■■■□□ 2.72
LIMD2-203ENST00000578067 CAMK4Q16566 473 aa32.07■■■□□ 2.72
LIMD2-203ENST00000578067 ANO1Q5XXA6 986 aa32.07■■■□□ 2.72
LIMD2-203ENST00000578067 PCDHA7Q9UN72 937 aa32.07■■■□□ 2.72
LIMD2-203ENST00000578067 FLT1P17948 1338 aa32.06■■■□□ 2.72
LIMD2-203ENST00000578067 MMP1P03956 469 aa32.06■■■□□ 2.72
LIMD2-203ENST00000578067 AKAP17AQ02040 695 aaKnown RBP32.06■■■□□ 2.72
LIMD2-203ENST00000578067 FUT2Q10981 343 aa32.06■■■□□ 2.72
LIMD2-203ENST00000578067 CERS5Q8N5B7 392 aa32.06■■■□□ 2.72
LIMD2-203ENST00000578067 SAFBQ15424 915 aaKnown RBP eCLIP32.05■■■□□ 2.72
LIMD2-203ENST00000578067 SF3A1Q15459 793 aaKnown RBP32.05■■■□□ 2.72
LIMD2-203ENST00000578067 CCDC178Q5BJE1 867 aa32.05■■■□□ 2.72
LIMD2-203ENST00000578067 RCSD1Q6JBY9 416 aa32.05■■■□□ 2.72
LIMD2-203ENST00000578067 DGKHQ86XP1 1220 aa32.05■■■□□ 2.72
LIMD2-203ENST00000578067 ZNF287Q9HBT7 754 aa32.05■■■□□ 2.72
LIMD2-203ENST00000578067 CDK5RAP2Q96SN8 1893 aa32.05■■■□□ 2.72
LIMD2-203ENST00000578067 QSER1Q2KHR3 1735 aa32.05■■■□□ 2.72
LIMD2-203ENST00000578067 SPTLC2O15270 562 aa32.05■■■□□ 2.72
LIMD2-203ENST00000578067 ADALQ6DHV7 355 aa32.05■■■□□ 2.72
LIMD2-203ENST00000578067 ZNF444Q8N0Y2 327 aaPredicted RBP32.05■■■□□ 2.72
LIMD2-203ENST00000578067 PRPF3O43395 683 aaKnown RBP32.04■■■□□ 2.72
LIMD2-203ENST00000578067 CCDC73Q6ZRK6 1079 aa32.04■■■□□ 2.72
LIMD2-203ENST00000578067 CTCFLQ8NI51 663 aaPredicted RBP32.04■■■□□ 2.72
LIMD2-203ENST00000578067 ANKS1AQ92625 1134 aa32.04■■■□□ 2.72
LIMD2-203ENST00000578067 CNKSR1Q969H4 720 aa32.04■■■□□ 2.72
LIMD2-203ENST00000578067 PLEKHA8P1O95397 391 aa32.04■■■□□ 2.72
LIMD2-203ENST00000578067 TMTC3Q6ZXV5 915 aa32.04■■■□□ 2.72
LIMD2-203ENST00000578067 IL17RBQ9NRM6 502 aa32.04■■■□□ 2.72
LIMD2-203ENST00000578067 TCP11L1Q9NUJ3 509 aa32.04■■■□□ 2.72
LIMD2-203ENST00000578067 A0A1W2PQ27 194 aa32.03■■■□□ 2.72
LIMD2-203ENST00000578067 A0A1W2PQ64 194 aa32.03■■■□□ 2.72
LIMD2-203ENST00000578067 A0A1W2PQD8 194 aa32.03■■■□□ 2.72
LIMD2-203ENST00000578067 CCDC192P0DO97 292 aa32.03■■■□□ 2.72
LIMD2-203ENST00000578067 CHRNA5P30532 468 aa32.03■■■□□ 2.72
LIMD2-203ENST00000578067 RBM43Q6ZSC3 357 aaKnown RBP32.03■■■□□ 2.72
LIMD2-203ENST00000578067 PODNQ7Z5L7 613 aa32.03■■■□□ 2.72
LIMD2-203ENST00000578067 GOLPH3LQ9H4A5 285 aa32.03■■■□□ 2.72
LIMD2-203ENST00000578067 TTF2Q9UNY4 1162 aaKnown RBP32.03■■■□□ 2.72
LIMD2-203ENST00000578067 KAT14Q9H8E8 782 aa32.02■■■□□ 2.72
LIMD2-203ENST00000578067 KCNJ14Q9UNX9 436 aa32.02■■■□□ 2.72
LIMD2-203ENST00000578067 DDX60LQ5H9U9 1706 aaKnown RBP32.02■■■□□ 2.72
LIMD2-203ENST00000578067 F8W031 263 aaPredicted RBP32.02■■■□□ 2.72
LIMD2-203ENST00000578067 TSPY3P0CV98 308 aa32.02■■■□□ 2.72
LIMD2-203ENST00000578067 TSPY8P0CW00 308 aa32.02■■■□□ 2.72
LIMD2-203ENST00000578067 UVSSAQ2YD98 709 aa32.02■■■□□ 2.72
LIMD2-203ENST00000578067 C16orf86Q6ZW13 317 aa32.02■■■□□ 2.72
LIMD2-203ENST00000578067 FSIP1Q8NA03 581 aa32.02■■■□□ 2.72
LIMD2-203ENST00000578067 SLC44A5Q8NCS7 719 aa32.02■■■□□ 2.72
LIMD2-203ENST00000578067 SLC39A14Q15043 492 aa32.01■■■□□ 2.71
LIMD2-203ENST00000578067 NOSTRINQ8IVI9 506 aa32.01■■■□□ 2.71
LIMD2-203ENST00000578067 DIS3L2Q8IYB7 885 aaKnown RBP32.01■■■□□ 2.71
LIMD2-203ENST00000578067 FOXP1Q9H334 677 aaPredicted RBP32.01■■■□□ 2.71
LIMD2-203ENST00000578067 BTBD18B2RXH4 712 aa32■■■□□ 2.71
LIMD2-203ENST00000578067 XBP1P17861 261 aa32■■■□□ 2.71
LIMD2-203ENST00000578067 RASA1P20936 1047 aa32■■■□□ 2.71
LIMD2-203ENST00000578067 FAM160A1Q05DH4 1040 aa32■■■□□ 2.71
LIMD2-203ENST00000578067 PKN1Q16512 942 aa32■■■□□ 2.71
LIMD2-203ENST00000578067 ENGASEQ8NFI3 743 aa32■■■□□ 2.71
LIMD2-203ENST00000578067 MXD3Q9BW11 206 aa32■■■□□ 2.71
LIMD2-203ENST00000578067 V9GY48 417 aaPredicted RBP32■■■□□ 2.71
LIMD2-203ENST00000578067 SNW1Q13573 536 aaKnown RBP32■■■□□ 2.71
LIMD2-203ENST00000578067 MRPS27Q92552 414 aaKnown RBP32■■■□□ 2.71
LIMD2-203ENST00000578067 CDK8P49336 464 aa31.99■■■□□ 2.71
LIMD2-203ENST00000578067 CKAP2LQ8IYA6 745 aa31.99■■■□□ 2.71
LIMD2-203ENST00000578067 SLX4Q8IY92 1834 aa31.99■■■□□ 2.71
LIMD2-203ENST00000578067 DBNDD1Q9H9R9 158 aa31.99■■■□□ 2.71
LIMD2-203ENST00000578067 KIF5BP33176 963 aa31.98■■■□□ 2.71
LIMD2-203ENST00000578067 SF3B2Q13435 895 aaKnown RBP31.98■■■□□ 2.71
LIMD2-203ENST00000578067 MAP3K14Q99558 947 aa31.98■■■□□ 2.71
LIMD2-203ENST00000578067 USP17L3A6NCW0 530 aa31.97■■■□□ 2.71
LIMD2-203ENST00000578067 USP17L4A6NCW7 530 aa31.97■■■□□ 2.71
LIMD2-203ENST00000578067 BAG6P46379 1132 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms