RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 LRRC26Q2I0M4 334 aa16.86■□□□□ 0.29
SREBF1-217ENST00000577897 LRRC24Q50LG9 513 aa16.86■□□□□ 0.29
SREBF1-217ENST00000577897 TREML2Q5T2D2 321 aa16.86■□□□□ 0.29
SREBF1-217ENST00000577897 FAM122AQ96E09 287 aa16.86■□□□□ 0.29
SREBF1-217ENST00000577897 CDX2Q99626 313 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-217ENST00000577897 USP40Q9NVE5 1235 aa16.86■□□□□ 0.29
SREBF1-217ENST00000577897 PNMA3Q9UL41 463 aa16.86■□□□□ 0.29
SREBF1-217ENST00000577897 COL2A1P02458 1487 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-217ENST00000577897 PHF20L1A8MW92 1017 aa16.85■□□□□ 0.29
SREBF1-217ENST00000577897 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
SREBF1-217ENST00000577897 GLRX3O76003 335 aaKnown RBP16.85■□□□□ 0.29
SREBF1-217ENST00000577897 GSPT1P15170 499 aaKnown RBP16.85■□□□□ 0.29
SREBF1-217ENST00000577897 SDSP20132 328 aa16.85■□□□□ 0.29
SREBF1-217ENST00000577897 RABL6Q3YEC7 729 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-217ENST00000577897 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-217ENST00000577897 IL27Q8NEV9 243 aa16.85■□□□□ 0.29
SREBF1-217ENST00000577897 TRIB2Q92519 343 aa16.85■□□□□ 0.29
SREBF1-217ENST00000577897 LBHD1Q9BQE6 289 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-217ENST00000577897 COPRSQ9NQ92 184 aa16.85■□□□□ 0.29
SREBF1-217ENST00000577897 DOCK1Q14185 1865 aa16.84■□□□□ 0.29
SREBF1-217ENST00000577897 SLURP2P0DP57 97 aa16.84■□□□□ 0.29
SREBF1-217ENST00000577897 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
SREBF1-217ENST00000577897 CYP2B6P20813 491 aa16.84■□□□□ 0.29
SREBF1-217ENST00000577897 RBM25P49756 843 aaKnown RBP16.84■□□□□ 0.29
SREBF1-217ENST00000577897 ATRNL1Q5VV63 1379 aa16.84■□□□□ 0.29
SREBF1-217ENST00000577897 MYH13Q9UKX3 1938 aa16.84■□□□□ 0.29
SREBF1-217ENST00000577897 PDE8BO95263 885 aa16.83■□□□□ 0.28
SREBF1-217ENST00000577897 MCCP23508 829 aa16.83■□□□□ 0.28
SREBF1-217ENST00000577897 WDR66Q8TBY9 1149 aa16.83■□□□□ 0.28
SREBF1-217ENST00000577897 SALL3Q9BXA9 1300 aa16.83■□□□□ 0.28
SREBF1-217ENST00000577897 IL1RAPL2Q9NP60 686 aa16.83■□□□□ 0.28
SREBF1-217ENST00000577897 GJD2Q9UKL4 321 aa16.83■□□□□ 0.28
SREBF1-217ENST00000577897 PHIPQ8WWQ0 1821 aa16.82■□□□□ 0.28
SREBF1-217ENST00000577897 TNFRSF10AO00220 468 aa16.82■□□□□ 0.28
SREBF1-217ENST00000577897 EPB41L2O43491 1005 aaKnown RBP16.82■□□□□ 0.28
SREBF1-217ENST00000577897 IFIT1P09914 478 aaKnown RBP16.82■□□□□ 0.28
SREBF1-217ENST00000577897 COL6A1P12109 1028 aa16.82■□□□□ 0.28
SREBF1-217ENST00000577897 PRDX5P30044 214 aa16.82■□□□□ 0.28
SREBF1-217ENST00000577897 OTUD7AQ8TE49 926 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-217ENST00000577897 MYLIPQ8WY64 445 aa16.82■□□□□ 0.28
SREBF1-217ENST00000577897 ECHDC1Q9NTX5 307 aa16.82■□□□□ 0.28
SREBF1-217ENST00000577897 FBXO3Q9UK99 471 aa16.82■□□□□ 0.28
SREBF1-217ENST00000577897 HIP1O00291 1037 aa16.81■□□□□ 0.28
SREBF1-217ENST00000577897 GCLCP48506 637 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-217ENST00000577897 VGLL2Q8N8G2 317 aa16.81■□□□□ 0.28
SREBF1-217ENST00000577897 RUFY2Q8WXA3 655 aa16.81■□□□□ 0.28
SREBF1-217ENST00000577897 RILPL2Q969X0 211 aa16.81■□□□□ 0.28
SREBF1-217ENST00000577897 KAZALD1Q96I82 304 aa16.81■□□□□ 0.28
SREBF1-217ENST00000577897 PLXNB2O15031 1838 aa16.8■□□□□ 0.28
SREBF1-217ENST00000577897 CTNND1O60716 968 aaKnown RBP16.8■□□□□ 0.28
SREBF1-217ENST00000577897 MAP3K21Q5TCX8 1036 aa16.8■□□□□ 0.28
SREBF1-217ENST00000577897 AACSQ86V21 672 aa16.8■□□□□ 0.28
SREBF1-217ENST00000577897 HSCBQ8IWL3 235 aa16.8■□□□□ 0.28
SREBF1-217ENST00000577897 BDP1A6H8Y1 2624 aa16.79■□□□□ 0.28
SREBF1-217ENST00000577897 LDHBP07195 334 aaKnown RBP16.79■□□□□ 0.28
SREBF1-217ENST00000577897 FOSL2P15408 326 aa16.79■□□□□ 0.28
SREBF1-217ENST00000577897 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-217ENST00000577897 PICALMQ13492 652 aa16.79■□□□□ 0.28
SREBF1-217ENST00000577897 PUM3Q15397 648 aaKnown RBP16.79■□□□□ 0.28
SREBF1-217ENST00000577897 SH3BP5LQ7L8J4 393 aa16.79■□□□□ 0.28
SREBF1-217ENST00000577897 PROCA1Q8NCQ7 364 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-217ENST00000577897 KLHDC4Q8TBB5 520 aa16.79■□□□□ 0.28
SREBF1-217ENST00000577897 SEMA6BQ9H3T3 888 aa16.79■□□□□ 0.28
SREBF1-217ENST00000577897 PRKAG2Q9UGJ0 569 aa16.79■□□□□ 0.28
SREBF1-217ENST00000577897 DDTLA6NHG4 134 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-217ENST00000577897 ENTPD3O75355 529 aa16.78■□□□□ 0.28
SREBF1-217ENST00000577897 ZKSCAN1P17029 563 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-217ENST00000577897 CCND3P30281 292 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-217ENST00000577897 IL15P40933 162 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-217ENST00000577897 HMGCS2P54868 508 aa16.78■□□□□ 0.28
SREBF1-217ENST00000577897 CACNB2Q08289 660 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-217ENST00000577897 SPP2Q13103 211 aa16.78■□□□□ 0.28
SREBF1-217ENST00000577897 PABPC4Q13310 644 aaKnown RBP eCLIP16.78■□□□□ 0.28
SREBF1-217ENST00000577897 NUDT12Q9BQG2 462 aa16.78■□□□□ 0.28
SREBF1-217ENST00000577897 SENP6Q9GZR1 1112 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-217ENST00000577897 ASCC2Q9H1I8 757 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-217ENST00000577897 LOC285556D6RIA3 1793 aa16.78■□□□□ 0.28
SREBF1-217ENST00000577897 MAST2Q6P0Q8 1798 aa16.78■□□□□ 0.28
SREBF1-217ENST00000577897 SLC5A1P13866 664 aa16.77■□□□□ 0.28
SREBF1-217ENST00000577897 ATN1P54259 1190 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-217ENST00000577897 TJAP1Q5JTD0 557 aa16.77■□□□□ 0.28
SREBF1-217ENST00000577897 IDI2Q9BXS1 227 aa16.77■□□□□ 0.28
SREBF1-217ENST00000577897 PA2G4Q9UQ80 394 aaKnown RBP16.77■□□□□ 0.28
SREBF1-217ENST00000577897 TMEM265A0A087WTH1 108 aa16.76■□□□□ 0.27
SREBF1-217ENST00000577897 FAM196BA6NMK8 535 aa16.76■□□□□ 0.27
SREBF1-217ENST00000577897 PEX10O60683 326 aa16.76■□□□□ 0.27
SREBF1-217ENST00000577897 CIAO1O76071 339 aa16.76■□□□□ 0.27
SREBF1-217ENST00000577897 FGFR2P21802 821 aa16.76■□□□□ 0.27
SREBF1-217ENST00000577897 TICAM2Q86XR7 235 aa16.76■□□□□ 0.27
SREBF1-217ENST00000577897 SOCS4Q8WXH5 440 aa16.76■□□□□ 0.27
SREBF1-217ENST00000577897 EVI5LQ96CN4 794 aa16.76■□□□□ 0.27
SREBF1-217ENST00000577897 SIL1Q9H173 461 aa16.76■□□□□ 0.27
SREBF1-217ENST00000577897 GPR108Q9NPR9 543 aa16.76■□□□□ 0.27
SREBF1-217ENST00000577897 RABEP1Q15276 862 aa16.75■□□□□ 0.27
SREBF1-217ENST00000577897 SHHQ15465 462 aa16.75■□□□□ 0.27
SREBF1-217ENST00000577897 CCL14Q16627 93 aa16.75■□□□□ 0.27
SREBF1-217ENST00000577897 LHX8Q68G74 356 aa16.75■□□□□ 0.27
SREBF1-217ENST00000577897 KIAA1211Q6ZU35 1233 aa16.75■□□□□ 0.27
SREBF1-217ENST00000577897 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
SREBF1-217ENST00000577897 SNX21Q969T3 373 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms