RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 SMC5Q8IY18 1101 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 ZNF280CQ8ND82 737 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 CD99L2Q8TCZ2 262 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 OSBP2Q969R2 916 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 EVI5LQ96CN4 794 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 DYNLL2Q96FJ2 89 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 ERO1AQ96HE7 468 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 TMOD4Q9NZQ9 345 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 ZBTB21Q9ULJ3 1066 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 AFG3L2Q9Y4W6 797 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 TRIM17Q9Y577 477 aa11.08□□□□□ -0.64
CDKN2A-211ENST00000577854 CYP2D7A0A087X1C5 515 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 USP17L12C9JPN9 530 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 USP17L21D6R901 530 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 M0R2C6 588 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 ARHGEF6Q15052 776 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 ABHD8Q96I13 439 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 TBC1D2Q9BYX2 928 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 NACAP1Q9BZK3 213 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 EHD4Q9H223 541 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 CPA4Q9UI42 421 aa11.07□□□□□ -0.64
CDKN2A-211ENST00000577854 USP17L10C9JJH3 530 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 RAD21O60216 631 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 TLR2O60603 784 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 CYP2C8P10632 490 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 GNAT2P19087 354 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 IRX3P78415 501 aaPredicted RBP11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 ATP2B2Q01814 1243 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 EVX2Q03828 476 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 PABPC4Q13310 644 aaKnown RBP eCLIP11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 SLC44A5Q8NCS7 719 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 STRBPQ96SI9 672 aaKnown RBP11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 SEC62Q99442 399 aaKnown RBP11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 CFHR5Q9BXR6 569 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 EFCC1Q9HA90 598 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 ZCCHC17Q9NP64 241 aaKnown RBP11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 ARPP21Q9UBL0 812 aaPredicted RBP11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 STAP2Q9UGK3 403 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 PNMA3Q9UL41 463 aa11.06□□□□□ -0.64
CDKN2A-211ENST00000577854 NEFLP07196 543 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 OSBPP22059 807 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 SHMT1P34896 483 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 JAG1P78504 1218 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 NOM1Q5C9Z4 860 aaKnown RBP11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 TREML2Q5T2D2 321 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 GPAT2Q6NUI2 795 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 CTR9Q6PD62 1173 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 CCDC129Q6ZRS4 1044 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 METTL16Q86W50 562 aaKnown RBP11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 NAPBQ9H115 298 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 MKNK2Q9HBH9 465 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 GINM1Q9NU53 330 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 SWAP70Q9UH65 585 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 AGTPBP1Q9UPW5 1226 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 SALL3Q9BXA9 1300 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 CASP8AP2Q9UKL3 1982 aa11.05□□□□□ -0.64
CDKN2A-211ENST00000577854 DOCK1Q14185 1865 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 FMNL1O95466 1100 aaPredicted RBP11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 BACE1P56817 501 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 MOGSQ13724 837 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 SEPT2Q15019 361 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 PKN2Q16513 984 aaKnown RBP11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 ZMYM1Q5SVZ6 1142 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 C12orf60Q5U649 245 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 TATDN1Q6P1N9 297 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 PLEKHM2Q8IWE5 1019 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 PROCA1Q8NCQ7 364 aaPredicted RBP11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 WDR18Q9BV38 432 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
CDKN2A-211ENST00000577854 GSG1L2A8MUP6 293 aa11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 C19orf81C9J6K1 198 aa11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 PATL2C9JE40 543 aaKnown RBP11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 SLC3A2P08195 630 aaKnown RBP11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 CDK8P49336 464 aa11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 LACTBP83111 547 aaPredicted RBP11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 ICA1Q05084 483 aa11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 USP17L2Q6R6M4 530 aa11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 TMEM179Q6ZVK1 233 aa11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 OTOP1Q7RTM1 612 aa11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 ANKRD13CQ8N6S4 541 aa11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 CWC22Q9HCG8 908 aaKnown RBP11.03□□□□□ -0.64
CDKN2A-211ENST00000577854 SMIM22K7EJ46 135 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 AKR1B1P15121 316 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 PSMC4P43686 418 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 USP14P54578 494 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 GABPAQ06546 454 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 NMIQ13287 307 aaPredicted RBP11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 GIMAP6Q6P9H5 292 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 FBXO46Q6PJ61 603 aaPredicted RBP11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 C16orf86Q6ZW13 317 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 CLEC10AQ8IUN9 316 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 CCAR1Q8IX12 1150 aaKnown RBP11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 ACER1Q8TDN7 264 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 FAM227BQ96M60 508 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 ARHGAP39Q9C0H5 1083 aa11.02□□□□□ -0.65
CDKN2A-211ENST00000577854 ASCC2Q9H1I8 757 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms