RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 CAPN6Q9Y6Q1 641 aa5.64□□□□□ -1.51
TOP2A-202ENST00000577541 NPR3P17342 541 aa5.63□□□□□ -1.51
TOP2A-202ENST00000577541 PI3P19957 117 aa5.63□□□□□ -1.51
TOP2A-202ENST00000577541 AFF3P51826 1226 aaKnown RBP5.63□□□□□ -1.51
TOP2A-202ENST00000577541 FGD1P98174 961 aa5.63□□□□□ -1.51
TOP2A-202ENST00000577541 DACT3Q96B18 629 aaPredicted RBP5.63□□□□□ -1.51
TOP2A-202ENST00000577541 TPX2Q9ULW0 747 aaKnown RBP5.63□□□□□ -1.51
TOP2A-202ENST00000577541 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.62□□□□□ -1.51
TOP2A-202ENST00000577541 SLITRK5O94991 958 aa5.62□□□□□ -1.51
TOP2A-202ENST00000577541 ATG7O95352 703 aa5.62□□□□□ -1.51
TOP2A-202ENST00000577541 ESR1P03372 595 aa5.62□□□□□ -1.51
TOP2A-202ENST00000577541 ZXDAP98168 799 aa5.62□□□□□ -1.51
TOP2A-202ENST00000577541 CDC37L1Q7L3B6 337 aa5.62□□□□□ -1.51
TOP2A-202ENST00000577541 SP8Q8IXZ3 490 aa5.62□□□□□ -1.51
TOP2A-202ENST00000577541 ADAM7Q9H2U9 754 aa5.62□□□□□ -1.51
TOP2A-202ENST00000577541 C19orf44Q9H6X5 657 aa5.62□□□□□ -1.51
TOP2A-202ENST00000577541 ZC3H12DA2A288 527 aaKnown RBP5.61□□□□□ -1.51
TOP2A-202ENST00000577541 SLC22A31A6NKX4 558 aa5.61□□□□□ -1.51
TOP2A-202ENST00000577541 PPP2R3AQ06190 1150 aa5.61□□□□□ -1.51
TOP2A-202ENST00000577541 RING1Q06587 406 aa5.61□□□□□ -1.51
TOP2A-202ENST00000577541 TIGD5Q53EQ6 642 aa5.61□□□□□ -1.51
TOP2A-202ENST00000577541 ARMCX6Q7L4S7 300 aa5.61□□□□□ -1.51
TOP2A-202ENST00000577541 TMPRSS7Q7RTY8 843 aa5.61□□□□□ -1.51
TOP2A-202ENST00000577541 LILRA2Q8N149 483 aa5.61□□□□□ -1.51
TOP2A-202ENST00000577541 SIGLEC10Q96LC7 697 aa5.61□□□□□ -1.51
TOP2A-202ENST00000577541 CWC22Q9HCG8 908 aaKnown RBP5.61□□□□□ -1.51
TOP2A-202ENST00000577541 PICK1Q9NRD5 415 aa5.61□□□□□ -1.51
TOP2A-202ENST00000577541 IRAK3Q9Y616 596 aa5.61□□□□□ -1.51
TOP2A-202ENST00000577541 TMEM238LA0A1B0GVL6 79 aa5.6□□□□□ -1.51
TOP2A-202ENST00000577541 WASH4PA8MWX3 477 aa5.6□□□□□ -1.51
TOP2A-202ENST00000577541 HHIPL2Q6UWX4 724 aa5.6□□□□□ -1.51
TOP2A-202ENST00000577541 SYT8Q8NBV8 401 aa5.6□□□□□ -1.51
TOP2A-202ENST00000577541 KCT2Q8NC54 265 aa5.6□□□□□ -1.51
TOP2A-202ENST00000577541 PDZD8Q8NEN9 1154 aa5.6□□□□□ -1.51
TOP2A-202ENST00000577541 GPBAR1Q8TDU6 330 aa5.6□□□□□ -1.51
TOP2A-202ENST00000577541 INTS4Q96HW7 963 aaKnown RBP5.6□□□□□ -1.51
TOP2A-202ENST00000577541 BDH2Q9BUT1 245 aa5.6□□□□□ -1.51
TOP2A-202ENST00000577541 NPHS2Q9NP85 383 aa5.6□□□□□ -1.51
TOP2A-202ENST00000577541 SRRDQ9UH36 339 aa5.6□□□□□ -1.51
TOP2A-202ENST00000577541 FANCGO15287 622 aa5.59□□□□□ -1.51
TOP2A-202ENST00000577541 LRIG2O94898 1065 aa5.59□□□□□ -1.51
TOP2A-202ENST00000577541 FAM13AO94988 1023 aa5.59□□□□□ -1.51
TOP2A-202ENST00000577541 PDE6BP35913 854 aa5.59□□□□□ -1.51
TOP2A-202ENST00000577541 VMACQ2NL98 169 aa5.59□□□□□ -1.51
TOP2A-202ENST00000577541 MAP1SQ66K74 1059 aaPredicted RBP5.59□□□□□ -1.51
TOP2A-202ENST00000577541 PRPF40BQ6NWY9 871 aaKnown RBP5.59□□□□□ -1.51
TOP2A-202ENST00000577541 FRMD5Q7Z6J6 570 aa5.59□□□□□ -1.51
TOP2A-202ENST00000577541 RIN3Q8TB24 985 aa5.59□□□□□ -1.51
TOP2A-202ENST00000577541 TMEM39AQ9NV64 488 aa5.59□□□□□ -1.51
TOP2A-202ENST00000577541 PALD1Q9ULE6 856 aa5.59□□□□□ -1.51
TOP2A-202ENST00000577541 YBX2Q9Y2T7 364 aaKnown RBP5.59□□□□□ -1.51
TOP2A-202ENST00000577541 ARNTP27540 789 aa5.58□□□□□ -1.52
TOP2A-202ENST00000577541 C12orf40Q86WS4 652 aa5.58□□□□□ -1.52
TOP2A-202ENST00000577541 SULF2Q8IWU5 870 aa5.58□□□□□ -1.52
TOP2A-202ENST00000577541 OXR1Q8N573 874 aa5.58□□□□□ -1.52
TOP2A-202ENST00000577541 ACSBG1Q96GR2 724 aa5.58□□□□□ -1.52
TOP2A-202ENST00000577541 EPB41L4AQ9HCS5 686 aaPredicted RBP5.58□□□□□ -1.52
TOP2A-202ENST00000577541 CACNA2D2Q9NY47 1150 aa5.58□□□□□ -1.52
TOP2A-202ENST00000577541 DCDC2CA8MYV0 355 aa5.57□□□□□ -1.52
TOP2A-202ENST00000577541 CBX7O95931 251 aa5.57□□□□□ -1.52
TOP2A-202ENST00000577541 TNFRSF1AP19438 455 aa5.57□□□□□ -1.52
TOP2A-202ENST00000577541 ZBTB37Q5TC79 503 aa5.57□□□□□ -1.52
TOP2A-202ENST00000577541 SLC16A11Q8NCK7 471 aa5.57□□□□□ -1.52
TOP2A-202ENST00000577541 LUC7LQ9NQ29 371 aaKnown RBP5.57□□□□□ -1.52
TOP2A-202ENST00000577541 GPN3Q9UHW5 284 aaPredicted RBP5.57□□□□□ -1.52
TOP2A-202ENST00000577541 FITM1A5D6W6 292 aa5.56□□□□□ -1.52
TOP2A-202ENST00000577541 NEFLP07196 543 aa5.56□□□□□ -1.52
TOP2A-202ENST00000577541 ZNF252P-AS1Q0IIN9 211 aa5.56□□□□□ -1.52
TOP2A-202ENST00000577541 CREG2Q8IUH2 290 aa5.56□□□□□ -1.52
TOP2A-202ENST00000577541 SORCS2Q96PQ0 1159 aa5.56□□□□□ -1.52
TOP2A-202ENST00000577541 FSHBP01225 129 aa5.55□□□□□ -1.52
TOP2A-202ENST00000577541 ORC1Q13415 861 aa5.55□□□□□ -1.52
TOP2A-202ENST00000577541 NR0B2Q15466 257 aa5.55□□□□□ -1.52
TOP2A-202ENST00000577541 MIPEPQ99797 713 aa5.55□□□□□ -1.52
TOP2A-202ENST00000577541 EMILIN2Q9BXX0 1053 aa5.55□□□□□ -1.52
TOP2A-202ENST00000577541 CNOT11Q9UKZ1 510 aaKnown RBP5.55□□□□□ -1.52
TOP2A-202ENST00000577541 GRIN3BO60391 1043 aa5.54□□□□□ -1.52
TOP2A-202ENST00000577541 ZGLP1P0C6A0 271 aa5.54□□□□□ -1.52
TOP2A-202ENST00000577541 TNK2Q07912 1038 aa5.54□□□□□ -1.52
TOP2A-202ENST00000577541 RTP5Q14D33 572 aa5.54□□□□□ -1.52
TOP2A-202ENST00000577541 SNX17Q15036 470 aa5.54□□□□□ -1.52
TOP2A-202ENST00000577541 ZNF746Q6NUN9 644 aaPredicted RBP5.54□□□□□ -1.52
TOP2A-202ENST00000577541 ZNF507Q8TCN5 953 aa5.54□□□□□ -1.52
TOP2A-202ENST00000577541 MBD1Q9UIS9 605 aaPredicted RBP5.54□□□□□ -1.52
TOP2A-202ENST00000577541 TRAK1Q9UPV9 953 aa5.54□□□□□ -1.52
TOP2A-202ENST00000577541 GADD45BO75293 160 aaPredicted RBP5.53□□□□□ -1.52
TOP2A-202ENST00000577541 CILPO75339 1184 aa5.53□□□□□ -1.52
TOP2A-202ENST00000577541 KIR3DL1P43629 444 aa5.53□□□□□ -1.52
TOP2A-202ENST00000577541 GALK1P51570 392 aa5.53□□□□□ -1.52
TOP2A-202ENST00000577541 HMGA2P52926 109 aa5.53□□□□□ -1.52
TOP2A-202ENST00000577541 DTHD1Q6ZMT9 781 aa5.53□□□□□ -1.52
TOP2A-202ENST00000577541 GRIN3AQ8TCU5 1115 aa5.53□□□□□ -1.52
TOP2A-202ENST00000577541 MENTQ9BUN1 341 aa5.53□□□□□ -1.52
TOP2A-202ENST00000577541 FBRSQ9HAH7 460 aa5.53□□□□□ -1.52
TOP2A-202ENST00000577541 K7ESM1 405 aa5.52□□□□□ -1.53
TOP2A-202ENST00000577541 PRICKLE3O43900 615 aaPredicted RBP5.52□□□□□ -1.53
TOP2A-202ENST00000577541 CPNE3O75131 537 aaKnown RBP5.52□□□□□ -1.53
TOP2A-202ENST00000577541 NME2P22392 152 aa5.52□□□□□ -1.53
TOP2A-202ENST00000577541 CYP7A1P22680 504 aa5.52□□□□□ -1.53
TOP2A-202ENST00000577541 SRSF3P84103 164 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms