RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 OS9Q13438 667 aaPredicted RBP16.61■□□□□ 0.25
CUEDC1-203ENST00000577422 FOXP4Q8IVH2 680 aaPredicted RBP16.61■□□□□ 0.25
CUEDC1-203ENST00000577422 FTSJ3Q8IY81 847 aaKnown RBP16.61■□□□□ 0.25
CUEDC1-203ENST00000577422 CRISPLD2Q9H0B8 497 aa16.61■□□□□ 0.25
CUEDC1-203ENST00000577422 MORF4L1Q9UBU8 362 aa16.61■□□□□ 0.25
CUEDC1-203ENST00000577422 TRIOBPQ9H2D6 2365 aa16.6■□□□□ 0.25
CUEDC1-203ENST00000577422 GDF11O95390 407 aa16.6■□□□□ 0.25
CUEDC1-203ENST00000577422 ASNSP08243 561 aa16.6■□□□□ 0.25
CUEDC1-203ENST00000577422 NOL10Q9BSC4 688 aaKnown RBP16.6■□□□□ 0.25
CUEDC1-203ENST00000577422 AS3MTQ9HBK9 375 aa16.6■□□□□ 0.25
CUEDC1-203ENST00000577422 TXNRD2Q9NNW7 524 aa16.6■□□□□ 0.25
CUEDC1-203ENST00000577422 ALPK3Q96L96 1907 aa16.59■□□□□ 0.25
CUEDC1-203ENST00000577422 FARP2O94887 1054 aaPredicted RBP16.59■□□□□ 0.25
CUEDC1-203ENST00000577422 TRIM32Q13049 653 aa16.59■□□□□ 0.25
CUEDC1-203ENST00000577422 PABPC4Q13310 644 aaKnown RBP eCLIP16.59■□□□□ 0.25
CUEDC1-203ENST00000577422 TATDN1Q6P1N9 297 aa16.59■□□□□ 0.25
CUEDC1-203ENST00000577422 COA7Q96BR5 231 aa16.59■□□□□ 0.25
CUEDC1-203ENST00000577422 DEFB118Q96PH6 123 aa16.59■□□□□ 0.25
CUEDC1-203ENST00000577422 P2RX7Q99572 595 aaKnown RBP16.59■□□□□ 0.25
CUEDC1-203ENST00000577422 SAP30BPQ9UHR5 308 aaKnown RBP16.59■□□□□ 0.25
CUEDC1-203ENST00000577422 ZBTB21Q9ULJ3 1066 aa16.59■□□□□ 0.25
CUEDC1-203ENST00000577422 MYH1P12882 1939 aa16.58■□□□□ 0.25
CUEDC1-203ENST00000577422 COL6A3P12111 3177 aa16.58■□□□□ 0.24
CUEDC1-203ENST00000577422 CYP7A1P22680 504 aa16.58■□□□□ 0.24
CUEDC1-203ENST00000577422 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
CUEDC1-203ENST00000577422 MIGA1Q8NAN2 632 aa16.58■□□□□ 0.24
CUEDC1-203ENST00000577422 PANK1Q8TE04 598 aa16.58■□□□□ 0.24
CUEDC1-203ENST00000577422 DPF3Q92784 378 aa16.58■□□□□ 0.24
CUEDC1-203ENST00000577422 EMILIN3Q9NT22 766 aa16.58■□□□□ 0.24
CUEDC1-203ENST00000577422 GINM1Q9NU53 330 aa16.58■□□□□ 0.24
CUEDC1-203ENST00000577422 RBM27Q9P2N5 1060 aaKnown RBP16.58■□□□□ 0.24
CUEDC1-203ENST00000577422 EXOC6BQ9Y2D4 811 aa16.58■□□□□ 0.24
CUEDC1-203ENST00000577422 ZBED9Q6R2W3 1325 aa16.57■□□□□ 0.24
CUEDC1-203ENST00000577422 USP17L10C9JJH3 530 aa16.57■□□□□ 0.24
CUEDC1-203ENST00000577422 IDH1O75874 414 aaKnown RBP16.57■□□□□ 0.24
CUEDC1-203ENST00000577422 MNX1P50219 401 aaPredicted RBP16.57■□□□□ 0.24
CUEDC1-203ENST00000577422 HERVK_113P62684 666 aa16.57■□□□□ 0.24
CUEDC1-203ENST00000577422 MAGEB6Q8N7X4 407 aa16.57■□□□□ 0.24
CUEDC1-203ENST00000577422 RIOK1Q9BRS2 568 aaKnown RBP16.57■□□□□ 0.24
CUEDC1-203ENST00000577422 RBPJLQ9UBG7 517 aa16.57■□□□□ 0.24
CUEDC1-203ENST00000577422 LAMA2P24043 3122 aaKnown RBP16.57■□□□□ 0.24
CUEDC1-203ENST00000577422 C19orf81C9J6K1 198 aa16.56■□□□□ 0.24
CUEDC1-203ENST00000577422 HMGCRP04035 888 aa16.56■□□□□ 0.24
CUEDC1-203ENST00000577422 Q3C1V9 767 aa16.56■□□□□ 0.24
CUEDC1-203ENST00000577422 CRACR2BQ8N4Y2 399 aaPredicted RBP16.56■□□□□ 0.24
CUEDC1-203ENST00000577422 DIS3LQ8TF46 1054 aaKnown RBP16.56■□□□□ 0.24
CUEDC1-203ENST00000577422 TRIB2Q92519 343 aa16.56■□□□□ 0.24
CUEDC1-203ENST00000577422 HTATIP2Q9BUP3 242 aa16.56■□□□□ 0.24
CUEDC1-203ENST00000577422 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.56■□□□□ 0.24
CUEDC1-203ENST00000577422 EHD4Q9H223 541 aa16.56■□□□□ 0.24
CUEDC1-203ENST00000577422 TAOK2Q9UL54 1235 aa16.56■□□□□ 0.24
CUEDC1-203ENST00000577422 GH2P01242 217 aa16.55■□□□□ 0.24
CUEDC1-203ENST00000577422 EVX2Q03828 476 aa16.55■□□□□ 0.24
CUEDC1-203ENST00000577422 MAP3K21Q5TCX8 1036 aa16.55■□□□□ 0.24
CUEDC1-203ENST00000577422 AACSQ86V21 672 aa16.55■□□□□ 0.24
CUEDC1-203ENST00000577422 SIRT2Q8IXJ6 389 aa16.55■□□□□ 0.24
CUEDC1-203ENST00000577422 USP6NLQ92738 828 aa16.55■□□□□ 0.24
CUEDC1-203ENST00000577422 C12orf42Q96LP6 360 aa16.55■□□□□ 0.24
CUEDC1-203ENST00000577422 TFRCP02786 760 aaKnown RBP16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 HLA-DOAP06340 250 aa16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 CAPN2P17655 700 aa16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 SHMT1P34896 483 aa16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 PLCD1P51178 756 aa16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 IRX3P78415 501 aaPredicted RBP16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 RHPN1Q8TCX5 695 aa16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 PAWRQ96IZ0 340 aaKnown RBP16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 PORCNQ9H237 461 aa16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 IL1RAPL2Q9NP60 686 aa16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 TMOD4Q9NZQ9 345 aa16.54■□□□□ 0.24
CUEDC1-203ENST00000577422 RPTORQ8N122 1335 aa16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 CNMDO75829 334 aa16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 ERVK-9P63128 1117 aa16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 ERVK-24P63145 666 aa16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 GABPAQ06546 454 aa16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 TMED8Q6PL24 325 aaPredicted RBP16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 CERS3Q8IU89 383 aa16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 ERC1Q8IUD2 1116 aa16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 GPRC5AQ8NFJ5 357 aa16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
CUEDC1-203ENST00000577422 NAV1Q8NEY1 1877 aa16.52■□□□□ 0.24
CUEDC1-203ENST00000577422 TCRBV5S4A2TA0A5A2 114 aa16.52■□□□□ 0.24
CUEDC1-203ENST00000577422 XRCC5P13010 732 aaKnown RBP16.52■□□□□ 0.24
CUEDC1-203ENST00000577422 CYP2B6P20813 491 aa16.52■□□□□ 0.24
CUEDC1-203ENST00000577422 USP5P45974 858 aa16.52■□□□□ 0.24
CUEDC1-203ENST00000577422 MAP3K12Q12852 859 aa16.52■□□□□ 0.24
CUEDC1-203ENST00000577422 MORN1Q5T089 497 aa16.52■□□□□ 0.24
CUEDC1-203ENST00000577422 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
CUEDC1-203ENST00000577422 ACER1Q8TDN7 264 aa16.52■□□□□ 0.24
CUEDC1-203ENST00000577422 TRIM34Q9BYJ4 488 aa16.52■□□□□ 0.24
CUEDC1-203ENST00000577422 ANKLE1Q8NAG6 615 aa16.51■□□□□ 0.23
CUEDC1-203ENST00000577422 HMX1Q9NP08 348 aaPredicted RBP16.51■□□□□ 0.23
CUEDC1-203ENST00000577422 ZBTB40Q9NUA8 1239 aa16.51■□□□□ 0.23
CUEDC1-203ENST00000577422 OGDHLQ9ULD0 1010 aa16.51■□□□□ 0.23
CUEDC1-203ENST00000577422 PDE6AP16499 860 aa16.5■□□□□ 0.23
CUEDC1-203ENST00000577422 MAPK4P31152 587 aa16.5■□□□□ 0.23
CUEDC1-203ENST00000577422 CCL14Q16627 93 aa16.5■□□□□ 0.23
CUEDC1-203ENST00000577422 CERKLQ49MI3 558 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-203ENST00000577422 DIEXFQ68CQ4 756 aaKnown RBP16.5■□□□□ 0.23
CUEDC1-203ENST00000577422 GPR142Q7Z601 462 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms