RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 AAASQ9NRG9 546 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 GGA3Q9NZ52 723 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 DACH1Q9UI36 760 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 XDHP47989 1333 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 FANCIQ9NVI1 1328 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 SPEF2Q9C093 1822 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 F6X3S4 739 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 SNAP23O00161 211 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 ZBTB7BO15156 539 aaPredicted RBP7.94□□□□□ -1.14
NUP88-212ENST00000576708 KLRK1P26718 216 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 FKBP5Q13451 457 aaPredicted RBP7.94□□□□□ -1.14
NUP88-212ENST00000576708 SCARF1Q14162 830 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 GCKRQ14397 625 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 CTC1Q2NKJ3 1217 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 ANGEL2Q5VTE6 544 aaKnown RBP7.94□□□□□ -1.14
NUP88-212ENST00000576708 ZNF787Q6DD87 383 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 TRIM50Q86XT4 487 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 PBXIP1Q96AQ6 731 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 DCPSQ96C86 337 aaKnown RBP7.94□□□□□ -1.14
NUP88-212ENST00000576708 CDCA5Q96FF9 252 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 ABHD8Q96I13 439 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 GMLQ99445 158 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 CDC5LQ99459 802 aaKnown RBP7.94□□□□□ -1.14
NUP88-212ENST00000576708 ARHGEF10LQ9HCE6 1279 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 GBA2Q9HCG7 927 aaPredicted RBP7.94□□□□□ -1.14
NUP88-212ENST00000576708 DNAAF2Q9NVR5 837 aaKnown RBP7.94□□□□□ -1.14
NUP88-212ENST00000576708 IL16Q14005 1332 aa7.94□□□□□ -1.14
NUP88-212ENST00000576708 FAM155AB1AL88 458 aaPredicted RBP7.93□□□□□ -1.14
NUP88-212ENST00000576708 ANP32CO43423 234 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 ITGA6P23229 1130 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 CCT4P50991 539 aaKnown RBP7.93□□□□□ -1.14
NUP88-212ENST00000576708 ZNF280AP59817 542 aaPredicted RBP7.93□□□□□ -1.14
NUP88-212ENST00000576708 PRAMEF18Q5VWM3 479 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 RGMBQ6NW40 437 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 MOB2Q70IA6 237 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 TRIM46Q7Z4K8 759 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 C2orf69Q8N8R5 385 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 AGBL3Q8NEM8 1001 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 DNAAF4Q8WXU2 420 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 HHIPL1Q96JK4 782 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 CHMP4AQ9BY43 222 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 MYOZ2Q9NPC6 264 aa7.93□□□□□ -1.14
NUP88-212ENST00000576708 BSDC1Q9NW68 430 aaPredicted RBP7.93□□□□□ -1.14
NUP88-212ENST00000576708 POLR2AP24928 1970 aaKnown RBP7.93□□□□□ -1.14
NUP88-212ENST00000576708 A0A1W2PRU2 124 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L15C9J2P7 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L10C9JJH3 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L13C9JLJ4 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L12C9JPN9 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L11C9JVI0 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L21D6R901 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L18D6R9N7 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L22D6RA61 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L17D6RBQ6 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L19D6RCP7 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L20D6RJB6 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 MEN1O00255 615 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 CSF1RP07333 972 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 BMP2P12643 396 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 IGHMBP2P38935 993 aaKnown RBP7.92□□□□□ -1.14
NUP88-212ENST00000576708 PTGIRP43119 386 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 SMCPP49901 116 aaPredicted RBP7.92□□□□□ -1.14
NUP88-212ENST00000576708 ATP1A2P50993 1020 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 ZNF157P51786 506 aaPredicted RBP7.92□□□□□ -1.14
NUP88-212ENST00000576708 KIF23Q02241 960 aaPredicted RBP7.92□□□□□ -1.14
NUP88-212ENST00000576708 USP17L24Q0WX57 530 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 NBPF9Q3BBW0 867 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 EPHA10Q5JZY3 1008 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 DACT2Q5SW24 774 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 MRPL14Q6P1L8 145 aaKnown RBP7.92□□□□□ -1.14
NUP88-212ENST00000576708 PODNQ7Z5L7 613 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 WDR63Q8IWG1 891 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 FAM9BQ8IZU0 186 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 PURBQ96QR8 312 aaKnown RBP7.92□□□□□ -1.14
NUP88-212ENST00000576708 TSEN34Q9BSV6 310 aaKnown RBP7.92□□□□□ -1.14
NUP88-212ENST00000576708 ETNK1Q9HBU6 452 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 MED23Q9ULK4 1368 aa7.92□□□□□ -1.14
NUP88-212ENST00000576708 CCDC85CA6NKD9 419 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 TAF5LO75529 589 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 SASH1O94885 1247 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 UPP2O95045 317 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 FOXO4P98177 505 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 CHRNDQ07001 517 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 NOGQ13253 232 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 PTK7Q13308 1070 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 BEND3Q5T5X7 828 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 CCDC102BQ68D86 513 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 CRIPAKQ8N1N5 446 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.91□□□□□ -1.14
NUP88-212ENST00000576708 LINS1Q8NG48 757 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 INSM2Q96T92 566 aaPredicted RBP7.91□□□□□ -1.14
NUP88-212ENST00000576708 PLA2G12BQ9BX93 195 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 SERTAD1Q9UHV2 236 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 CHMP3Q9Y3E7 222 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 ZNF804BA4D1E1 1349 aa7.91□□□□□ -1.14
NUP88-212ENST00000576708 PSME4Q14997 1843 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 ZNF609O15014 1411 aa7.9□□□□□ -1.14
NUP88-212ENST00000576708 ANKRD18BA2A2Z9 1011 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms