RNA–Protein interactions for RNA: ENST00000574137.1

NUBP1-206, Transcript of nucleotide binding protein 1, humanhuman

TSL 1 (best)

Gene NUBP1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-206ENST00000574137 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
NUBP1-206ENST00000574137 BOLA2Q9H3K6 86 aa16.54■□□□□ 0.24
NUBP1-206ENST00000574137 GINM1Q9NU53 330 aa16.54■□□□□ 0.24
NUBP1-206ENST00000574137 MYH1P12882 1939 aa16.53■□□□□ 0.24
NUBP1-206ENST00000574137 MKI67P46013 3256 aaKnown RBP16.53■□□□□ 0.24
NUBP1-206ENST00000574137 POLR3DP05423 398 aaPredicted RBP16.53■□□□□ 0.24
NUBP1-206ENST00000574137 BACE1P56817 501 aa16.53■□□□□ 0.24
NUBP1-206ENST00000574137 IRX3P78415 501 aaPredicted RBP16.53■□□□□ 0.24
NUBP1-206ENST00000574137 JAG1P78504 1218 aa16.53■□□□□ 0.24
NUBP1-206ENST00000574137 SHROOM1Q2M3G4 852 aaPredicted RBP16.53■□□□□ 0.24
NUBP1-206ENST00000574137 SH3D19Q5HYK7 790 aa16.53■□□□□ 0.24
NUBP1-206ENST00000574137 CRNKL1Q9BZJ0 848 aaKnown RBP16.53■□□□□ 0.24
NUBP1-206ENST00000574137 ASCC2Q9H1I8 757 aaPredicted RBP16.53■□□□□ 0.24
NUBP1-206ENST00000574137 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
NUBP1-206ENST00000574137 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
NUBP1-206ENST00000574137 ZBTB21Q9ULJ3 1066 aa16.53■□□□□ 0.24
NUBP1-206ENST00000574137 GABRQQ9UN88 632 aa16.53■□□□□ 0.24
NUBP1-206ENST00000574137 SIPA1L1O43166 1804 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 FOCADQ5VW36 1801 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 ZNF532Q9HCE3 1301 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 C19orf81C9J6K1 198 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 USP17L10C9JJH3 530 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 GH2P01242 217 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 GCLCP48506 637 aaPredicted RBP16.52■□□□□ 0.24
NUBP1-206ENST00000574137 UBXN2AP68543 259 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 MTFR1Q15390 333 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 COA7Q96BR5 231 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
NUBP1-206ENST00000574137 RIOK1Q9BRS2 568 aaKnown RBP16.52■□□□□ 0.24
NUBP1-206ENST00000574137 LRRCC1Q9C099 1032 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 PAG1Q9NWQ8 432 aa16.52■□□□□ 0.24
NUBP1-206ENST00000574137 BRCA2P51587 3418 aa16.51■□□□□ 0.23
NUBP1-206ENST00000574137 MGAMO43451 1857 aa16.51■□□□□ 0.23
NUBP1-206ENST00000574137 ATP5JP18859 108 aa16.51■□□□□ 0.23
NUBP1-206ENST00000574137 FLT3LGP49771 235 aa16.51■□□□□ 0.23
NUBP1-206ENST00000574137 FAM110CQ1W6H9 321 aa16.51■□□□□ 0.23
NUBP1-206ENST00000574137 SLAIN1Q8ND83 568 aa16.51■□□□□ 0.23
NUBP1-206ENST00000574137 DOCK3Q8IZD9 2030 aa16.51■□□□□ 0.23
NUBP1-206ENST00000574137 SMARCA5O60264 1052 aaPredicted RBP16.5■□□□□ 0.23
NUBP1-206ENST00000574137 ADCY3O60266 1144 aa16.5■□□□□ 0.23
NUBP1-206ENST00000574137 RAB3GAP1Q15042 981 aa16.5■□□□□ 0.23
NUBP1-206ENST00000574137 CERKLQ49MI3 558 aaPredicted RBP16.5■□□□□ 0.23
NUBP1-206ENST00000574137 FEZ1Q99689 392 aa16.5■□□□□ 0.23
NUBP1-206ENST00000574137 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.5■□□□□ 0.23
NUBP1-206ENST00000574137 EHD4Q9H223 541 aa16.5■□□□□ 0.23
NUBP1-206ENST00000574137 CABP5Q9NP86 173 aa16.5■□□□□ 0.23
NUBP1-206ENST00000574137 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
NUBP1-206ENST00000574137 RBBP6Q7Z6E9 1792 aaKnown RBP16.49■□□□□ 0.23
NUBP1-206ENST00000574137 CCL5P13501 91 aa16.49■□□□□ 0.23
NUBP1-206ENST00000574137 PLCD1P51178 756 aa16.49■□□□□ 0.23
NUBP1-206ENST00000574137 ABCB5Q2M3G0 1257 aa16.49■□□□□ 0.23
NUBP1-206ENST00000574137 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
NUBP1-206ENST00000574137 USP17L2Q6R6M4 530 aa16.49■□□□□ 0.23
NUBP1-206ENST00000574137 SDR42E1Q8WUS8 393 aa16.49■□□□□ 0.23
NUBP1-206ENST00000574137 RNF208Q9H0X6 261 aa16.49■□□□□ 0.23
NUBP1-206ENST00000574137 TCRBV5S4A2TA0A5A2 114 aa16.48■□□□□ 0.23
NUBP1-206ENST00000574137 ELNP15502 786 aa16.48■□□□□ 0.23
NUBP1-206ENST00000574137 HOXA7P31268 230 aaPredicted RBP16.48■□□□□ 0.23
NUBP1-206ENST00000574137 ZYXQ15942 572 aaKnown RBP16.48■□□□□ 0.23
NUBP1-206ENST00000574137 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
NUBP1-206ENST00000574137 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
NUBP1-206ENST00000574137 P2RX7Q99572 595 aaKnown RBP16.48■□□□□ 0.23
NUBP1-206ENST00000574137 HAUS7Q99871 368 aa16.48■□□□□ 0.23
NUBP1-206ENST00000574137 ARMT1Q9H993 441 aa16.48■□□□□ 0.23
NUBP1-206ENST00000574137 LOC285556D6RIA3 1793 aa16.48■□□□□ 0.23
NUBP1-206ENST00000574137 MPHOSPH10O00566 681 aaKnown RBP16.47■□□□□ 0.23
NUBP1-206ENST00000574137 ADD2P35612 726 aa16.47■□□□□ 0.23
NUBP1-206ENST00000574137 IRF5Q13568 498 aa16.47■□□□□ 0.23
NUBP1-206ENST00000574137 SLFNL1Q499Z3 407 aa16.47■□□□□ 0.23
NUBP1-206ENST00000574137 CCAR1Q8IX12 1150 aaKnown RBP16.47■□□□□ 0.23
NUBP1-206ENST00000574137 EMILIN3Q9NT22 766 aa16.47■□□□□ 0.23
NUBP1-206ENST00000574137 MBD4O95243 580 aa16.46■□□□□ 0.23
NUBP1-206ENST00000574137 INHAP05111 366 aa16.46■□□□□ 0.23
NUBP1-206ENST00000574137 GJB1P08034 283 aa16.46■□□□□ 0.23
NUBP1-206ENST00000574137 SHMT1P34896 483 aa16.46■□□□□ 0.23
NUBP1-206ENST00000574137 USP14P54578 494 aa16.46■□□□□ 0.23
NUBP1-206ENST00000574137 HERVK_113P62684 666 aa16.46■□□□□ 0.23
NUBP1-206ENST00000574137 GPRC5AQ8NFJ5 357 aa16.46■□□□□ 0.23
NUBP1-206ENST00000574137 PXYLP1Q8TE99 480 aa16.46■□□□□ 0.23
NUBP1-206ENST00000574137 UNC93B1Q9H1C4 597 aa16.46■□□□□ 0.23
NUBP1-206ENST00000574137 DCP1AQ9NPI6 582 aaPredicted RBP16.46■□□□□ 0.23
NUBP1-206ENST00000574137 CYP2D6P10635 497 aa16.45■□□□□ 0.22
NUBP1-206ENST00000574137 ZSCAN25Q6NSZ9 544 aa16.45■□□□□ 0.22
NUBP1-206ENST00000574137 ACER1Q8TDN7 264 aa16.45■□□□□ 0.22
NUBP1-206ENST00000574137 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
NUBP1-206ENST00000574137 GPATCH3Q96I76 525 aa16.45■□□□□ 0.22
NUBP1-206ENST00000574137 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
NUBP1-206ENST00000574137 ECHDC1Q9NTX5 307 aa16.45■□□□□ 0.22
NUBP1-206ENST00000574137 MORF4L1Q9UBU8 362 aa16.45■□□□□ 0.22
NUBP1-206ENST00000574137 CEP290O15078 2479 aa16.45■□□□□ 0.22
NUBP1-206ENST00000574137 USP17L15C9J2P7 530 aa16.44■□□□□ 0.22
NUBP1-206ENST00000574137 USP17L13C9JLJ4 530 aa16.44■□□□□ 0.22
NUBP1-206ENST00000574137 USP17L11C9JVI0 530 aa16.44■□□□□ 0.22
NUBP1-206ENST00000574137 USP17L18D6R9N7 530 aa16.44■□□□□ 0.22
NUBP1-206ENST00000574137 USP17L22D6RA61 530 aa16.44■□□□□ 0.22
NUBP1-206ENST00000574137 USP17L17D6RBQ6 530 aa16.44■□□□□ 0.22
NUBP1-206ENST00000574137 USP17L19D6RCP7 530 aa16.44■□□□□ 0.22
NUBP1-206ENST00000574137 USP17L20D6RJB6 530 aa16.44■□□□□ 0.22
NUBP1-206ENST00000574137 PRKAB2O43741 272 aa16.44■□□□□ 0.22
NUBP1-206ENST00000574137 PEX10O60683 326 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms