RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 GABRQQ9UN88 632 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 BRCA2P51587 3418 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 MGAMO43451 1857 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 GH2P01242 217 aa13.73□□□□□ -0.21
RPAIN-214ENST00000574003 RRP1P56182 461 aaKnown RBP13.73□□□□□ -0.21
RPAIN-214ENST00000574003 PRKCZQ05513 592 aa13.73□□□□□ -0.21
RPAIN-214ENST00000574003 ARHGEF6Q15052 776 aa13.73□□□□□ -0.21
RPAIN-214ENST00000574003 SMCR8Q8TEV9 937 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-214ENST00000574003 HAUS7Q99871 368 aa13.73□□□□□ -0.21
RPAIN-214ENST00000574003 DCTPP1Q9H773 170 aa13.73□□□□□ -0.21
RPAIN-214ENST00000574003 SRRDQ9UH36 339 aa13.73□□□□□ -0.21
RPAIN-214ENST00000574003 NAV1Q8NEY1 1877 aa13.73□□□□□ -0.21
RPAIN-214ENST00000574003 LOC285556D6RIA3 1793 aa13.73□□□□□ -0.21
RPAIN-214ENST00000574003 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
RPAIN-214ENST00000574003 IGSF3O75054 1194 aa13.72□□□□□ -0.21
RPAIN-214ENST00000574003 MBD4O95243 580 aa13.72□□□□□ -0.21
RPAIN-214ENST00000574003 ASNSP08243 561 aa13.72□□□□□ -0.21
RPAIN-214ENST00000574003 ADD2P35612 726 aa13.72□□□□□ -0.21
RPAIN-214ENST00000574003 BACE1P56817 501 aa13.72□□□□□ -0.21
RPAIN-214ENST00000574003 MTFR1Q15390 333 aa13.72□□□□□ -0.21
RPAIN-214ENST00000574003 PROCA1Q8NCQ7 364 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-214ENST00000574003 SLC44A5Q8NCS7 719 aa13.72□□□□□ -0.21
RPAIN-214ENST00000574003 CRBNQ96SW2 442 aa13.72□□□□□ -0.21
RPAIN-214ENST00000574003 ASCC2Q9H1I8 757 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-214ENST00000574003 SLC45A1Q9Y2W3 748 aa13.72□□□□□ -0.21
RPAIN-214ENST00000574003 MKI67P46013 3256 aaKnown RBP13.72□□□□□ -0.21
RPAIN-214ENST00000574003 DDX60LQ5H9U9 1706 aaKnown RBP13.71□□□□□ -0.21
RPAIN-214ENST00000574003 BAZ2AQ9UIF9 1905 aaKnown RBP13.71□□□□□ -0.21
RPAIN-214ENST00000574003 CYP2D7A0A087X1C5 515 aa13.71□□□□□ -0.21
RPAIN-214ENST00000574003 POLR3DP05423 398 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-214ENST00000574003 SHMT1P34896 483 aa13.71□□□□□ -0.21
RPAIN-214ENST00000574003 FCGRTP55899 365 aa13.71□□□□□ -0.21
RPAIN-214ENST00000574003 ZYXQ15942 572 aaKnown RBP13.71□□□□□ -0.21
RPAIN-214ENST00000574003 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.21
RPAIN-214ENST00000574003 ACER1Q8TDN7 264 aa13.71□□□□□ -0.21
RPAIN-214ENST00000574003 OTUD7AQ8TE49 926 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-214ENST00000574003 DYNLL2Q96FJ2 89 aa13.71□□□□□ -0.21
RPAIN-214ENST00000574003 WDR18Q9BV38 432 aa13.71□□□□□ -0.21
RPAIN-214ENST00000574003 CRNKL1Q9BZJ0 848 aaKnown RBP13.71□□□□□ -0.21
RPAIN-214ENST00000574003 AS3MTQ9HBK9 375 aa13.71□□□□□ -0.21
RPAIN-214ENST00000574003 MCM9Q9NXL9 1143 aa13.71□□□□□ -0.21
RPAIN-214ENST00000574003 SERPINB13Q9UIV8 391 aa13.71□□□□□ -0.21
RPAIN-214ENST00000574003 GUCY1A2P33402 732 aa13.7□□□□□ -0.22
RPAIN-214ENST00000574003 RAB3GAP1Q15042 981 aa13.7□□□□□ -0.22
RPAIN-214ENST00000574003 TATDN1Q6P1N9 297 aa13.7□□□□□ -0.22
RPAIN-214ENST00000574003 TTC6Q86TZ1 520 aa13.7□□□□□ -0.22
RPAIN-214ENST00000574003 RAET1EQ8TD07 263 aa13.7□□□□□ -0.22
RPAIN-214ENST00000574003 P2RX7Q99572 595 aaKnown RBP13.7□□□□□ -0.22
RPAIN-214ENST00000574003 DCP1AQ9NPI6 582 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-214ENST00000574003 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
RPAIN-214ENST00000574003 TMOD4Q9NZQ9 345 aa13.7□□□□□ -0.22
RPAIN-214ENST00000574003 MYH7P12883 1935 aa13.7□□□□□ -0.22
RPAIN-214ENST00000574003 USP17L10C9JJH3 530 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 GNRH1P01148 92 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 ELNP15502 786 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 HOXD10P28358 340 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 FLT3LGP49771 235 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 GABPAQ06546 454 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 ABCB5Q2M3G0 1257 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 CERKLQ49MI3 558 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-214ENST00000574003 POTEEQ6S8J3 1075 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 NBPF11Q86T75 865 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 CERS3Q8IU89 383 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 TMEM106CQ9BVX2 250 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 TBC1D2Q9BYX2 928 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 PUS7LQ9H0K6 701 aaKnown RBP13.69□□□□□ -0.22
RPAIN-214ENST00000574003 EHD4Q9H223 541 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 ECHDC1Q9NTX5 307 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
RPAIN-214ENST00000574003 TNPO2O14787 897 aaKnown RBP13.68□□□□□ -0.22
RPAIN-214ENST00000574003 GRK4P32298 578 aa13.68□□□□□ -0.22
RPAIN-214ENST00000574003 SEPT2Q15019 361 aa13.68□□□□□ -0.22
RPAIN-214ENST00000574003 CLEC10AQ8IUN9 316 aa13.68□□□□□ -0.22
RPAIN-214ENST00000574003 PNMA3Q9UL41 463 aa13.68□□□□□ -0.22
RPAIN-214ENST00000574003 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
RPAIN-214ENST00000574003 MPHOSPH10O00566 681 aaKnown RBP13.67□□□□□ -0.22
RPAIN-214ENST00000574003 PRMT2P55345 433 aa13.67□□□□□ -0.22
RPAIN-214ENST00000574003 IRX3P78415 501 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-214ENST00000574003 FAM110CQ1W6H9 321 aa13.67□□□□□ -0.22
RPAIN-214ENST00000574003 TMED8Q6PL24 325 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-214ENST00000574003 FEZ1Q99689 392 aa13.67□□□□□ -0.22
RPAIN-214ENST00000574003 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.67□□□□□ -0.22
RPAIN-214ENST00000574003 BIN2Q9UBW5 565 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-214ENST00000574003 C19orf81C9J6K1 198 aa13.66□□□□□ -0.22
RPAIN-214ENST00000574003 ADCY3O60266 1144 aa13.66□□□□□ -0.22
RPAIN-214ENST00000574003 HOXA7P31268 230 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-214ENST00000574003 HERVK_113P62684 666 aa13.66□□□□□ -0.22
RPAIN-214ENST00000574003 PABPC4Q13310 644 aaKnown RBP eCLIP13.66□□□□□ -0.22
RPAIN-214ENST00000574003 UBE3CQ15386 1083 aa13.66□□□□□ -0.22
RPAIN-214ENST00000574003 Q3C1V9 767 aa13.66□□□□□ -0.22
RPAIN-214ENST00000574003 USP17L2Q6R6M4 530 aa13.66□□□□□ -0.22
RPAIN-214ENST00000574003 STK11IPQ8N1F8 1099 aa13.66□□□□□ -0.22
RPAIN-214ENST00000574003 SHISA4Q96DD7 197 aa13.66□□□□□ -0.22
RPAIN-214ENST00000574003 PAGR1Q9BTK6 254 aa13.66□□□□□ -0.22
RPAIN-214ENST00000574003 SLC4A4Q9Y6R1 1079 aa13.66□□□□□ -0.22
RPAIN-214ENST00000574003 A0A1W2PRG0 241 aa13.65□□□□□ -0.22
RPAIN-214ENST00000574003 USP17L12C9JPN9 530 aa13.65□□□□□ -0.22
RPAIN-214ENST00000574003 USP17L21D6R901 530 aa13.65□□□□□ -0.22
RPAIN-214ENST00000574003 CCL5P13501 91 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms