RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 ITPRIPQ8IWB1 547 aa26.92■■□□□ 1.9
SNF8-216ENST00000573795 CRISPLD2Q9H0B8 497 aa26.92■■□□□ 1.9
SNF8-216ENST00000573795 MORF4L1Q9UBU8 362 aa26.92■■□□□ 1.9
SNF8-216ENST00000573795 IGSF3O75054 1194 aa26.91■■□□□ 1.9
SNF8-216ENST00000573795 GDF11O95390 407 aa26.91■■□□□ 1.9
SNF8-216ENST00000573795 FOXP4Q8IVH2 680 aaPredicted RBP26.91■■□□□ 1.9
SNF8-216ENST00000573795 FTSJ3Q8IY81 847 aaKnown RBP26.91■■□□□ 1.9
SNF8-216ENST00000573795 PRO3102Q9H379 93 aa26.91■■□□□ 1.9
SNF8-216ENST00000573795 RBM27Q9P2N5 1060 aaKnown RBP26.91■■□□□ 1.9
SNF8-216ENST00000573795 SAP30BPQ9UHR5 308 aaKnown RBP26.91■■□□□ 1.9
SNF8-216ENST00000573795 PEX10O60683 326 aa26.9■■□□□ 1.9
SNF8-216ENST00000573795 HNRNPUQ00839 825 aaKnown RBP eCLIP26.9■■□□□ 1.9
SNF8-216ENST00000573795 ZBTB21Q9ULJ3 1066 aa26.9■■□□□ 1.9
SNF8-216ENST00000573795 CYP7A1P22680 504 aa26.89■■□□□ 1.9
SNF8-216ENST00000573795 HOXA7P31268 230 aaPredicted RBP26.89■■□□□ 1.9
SNF8-216ENST00000573795 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.89■■□□□ 1.9
SNF8-216ENST00000573795 NDUFB9Q9Y6M9 179 aa26.89■■□□□ 1.9
SNF8-216ENST00000573795 DDX60LQ5H9U9 1706 aaKnown RBP26.88■■□□□ 1.89
SNF8-216ENST00000573795 TFRCP02786 760 aaKnown RBP26.88■■□□□ 1.89
SNF8-216ENST00000573795 TRIM32Q13049 653 aa26.88■■□□□ 1.89
SNF8-216ENST00000573795 CEP85Q6P2H3 762 aa26.88■■□□□ 1.89
SNF8-216ENST00000573795 CRACR2BQ8N4Y2 399 aaPredicted RBP26.88■■□□□ 1.89
SNF8-216ENST00000573795 P2RX7Q99572 595 aaKnown RBP26.88■■□□□ 1.89
SNF8-216ENST00000573795 TXNRD2Q9NNW7 524 aa26.88■■□□□ 1.89
SNF8-216ENST00000573795 HMGCRP04035 888 aa26.87■■□□□ 1.89
SNF8-216ENST00000573795 ANTXR1Q9H6X2 564 aa26.87■■□□□ 1.89
SNF8-216ENST00000573795 GINM1Q9NU53 330 aa26.87■■□□□ 1.89
SNF8-216ENST00000573795 TMOD4Q9NZQ9 345 aa26.87■■□□□ 1.89
SNF8-216ENST00000573795 USP17L10C9JJH3 530 aa26.86■■□□□ 1.89
SNF8-216ENST00000573795 CAPN2P17655 700 aa26.86■■□□□ 1.89
SNF8-216ENST00000573795 HERVK_113P62684 666 aa26.86■■□□□ 1.89
SNF8-216ENST00000573795 IRX3P78415 501 aaPredicted RBP26.86■■□□□ 1.89
SNF8-216ENST00000573795 POTEEQ6S8J3 1075 aa26.86■■□□□ 1.89
SNF8-216ENST00000573795 MIGA1Q8NAN2 632 aa26.86■■□□□ 1.89
SNF8-216ENST00000573795 DIS3LQ8TF46 1054 aaKnown RBP26.86■■□□□ 1.89
SNF8-216ENST00000573795 C19orf81C9J6K1 198 aa26.85■■□□□ 1.89
SNF8-216ENST00000573795 IDH1O75874 414 aaKnown RBP26.85■■□□□ 1.89
SNF8-216ENST00000573795 HLA-DOAP06340 250 aa26.85■■□□□ 1.89
SNF8-216ENST00000573795 TRIM34Q9BYJ4 488 aa26.85■■□□□ 1.89
SNF8-216ENST00000573795 NR2E3Q9Y5X4 410 aa26.85■■□□□ 1.89
SNF8-216ENST00000573795 LAMA3Q16787 3333 aa26.85■■□□□ 1.89
SNF8-216ENST00000573795 MAGEB6Q8N7X4 407 aa26.84■■□□□ 1.89
SNF8-216ENST00000573795 TRIB2Q92519 343 aa26.84■■□□□ 1.89
SNF8-216ENST00000573795 PAWRQ96IZ0 340 aaKnown RBP26.84■■□□□ 1.89
SNF8-216ENST00000573795 EMILIN3Q9NT22 766 aa26.84■■□□□ 1.89
SNF8-216ENST00000573795 RBPJLQ9UBG7 517 aa26.84■■□□□ 1.89
SNF8-216ENST00000573795 EXOC6BQ9Y2D4 811 aa26.84■■□□□ 1.89
SNF8-216ENST00000573795 GH2P01242 217 aa26.82■■□□□ 1.88
SNF8-216ENST00000573795 MNX1P50219 401 aaPredicted RBP26.82■■□□□ 1.88
SNF8-216ENST00000573795 TATDN1Q6P1N9 297 aa26.82■■□□□ 1.88
SNF8-216ENST00000573795 MIER1Q8N108 512 aa26.82■■□□□ 1.88
SNF8-216ENST00000573795 RPTORQ8N122 1335 aa26.82■■□□□ 1.88
SNF8-216ENST00000573795 NAV1Q8NEY1 1877 aa26.81■■□□□ 1.88
SNF8-216ENST00000573795 Q3C1V9 767 aa26.81■■□□□ 1.88
SNF8-216ENST00000573795 GPRC5AQ8NFJ5 357 aa26.81■■□□□ 1.88
SNF8-216ENST00000573795 PANK1Q8TE04 598 aa26.81■■□□□ 1.88
SNF8-216ENST00000573795 EVI5O60447 810 aa26.8■■□□□ 1.88
SNF8-216ENST00000573795 CYP2B6P20813 491 aa26.8■■□□□ 1.88
SNF8-216ENST00000573795 MAP3K21Q5TCX8 1036 aa26.8■■□□□ 1.88
SNF8-216ENST00000573795 AACSQ86V21 672 aa26.8■■□□□ 1.88
SNF8-216ENST00000573795 EHD4Q9H223 541 aa26.8■■□□□ 1.88
SNF8-216ENST00000573795 PORCNQ9H237 461 aa26.8■■□□□ 1.88
SNF8-216ENST00000573795 USP5P45974 858 aa26.79■■□□□ 1.88
SNF8-216ENST00000573795 ERVK-9P63128 1117 aa26.79■■□□□ 1.88
SNF8-216ENST00000573795 ERVK-24P63145 666 aa26.79■■□□□ 1.88
SNF8-216ENST00000573795 USP17L2Q6R6M4 530 aa26.79■■□□□ 1.88
SNF8-216ENST00000573795 NECAB2Q7Z6G3 386 aa26.79■■□□□ 1.88
SNF8-216ENST00000573795 CERS3Q8IU89 383 aa26.79■■□□□ 1.88
SNF8-216ENST00000573795 ANKLE1Q8NAG6 615 aa26.79■■□□□ 1.88
SNF8-216ENST00000573795 USP6NLQ92738 828 aa26.79■■□□□ 1.88
SNF8-216ENST00000573795 C12orf42Q96LP6 360 aa26.79■■□□□ 1.88
SNF8-216ENST00000573795 RIOK1Q9BRS2 568 aaKnown RBP26.79■■□□□ 1.88
SNF8-216ENST00000573795 HMX1Q9NP08 348 aaPredicted RBP26.79■■□□□ 1.88
SNF8-216ENST00000573795 NUDT12Q9BQG2 462 aa26.78■■□□□ 1.88
SNF8-216ENST00000573795 SERPINB13Q9UIV8 391 aa26.78■■□□□ 1.88
SNF8-216ENST00000573795 XRCC5P13010 732 aaKnown RBP26.77■■□□□ 1.88
SNF8-216ENST00000573795 MAP3K12Q12852 859 aa26.77■■□□□ 1.88
SNF8-216ENST00000573795 ERC1Q8IUD2 1116 aa26.77■■□□□ 1.88
SNF8-216ENST00000573795 SOCS4Q8WXH5 440 aa26.77■■□□□ 1.88
SNF8-216ENST00000573795 IL1RAPL2Q9NP60 686 aa26.77■■□□□ 1.88
SNF8-216ENST00000573795 CNMDO75829 334 aa26.76■■□□□ 1.87
SNF8-216ENST00000573795 PRKAR2AP13861 404 aaKnown RBP26.76■■□□□ 1.87
SNF8-216ENST00000573795 MAPK4P31152 587 aa26.76■■□□□ 1.87
SNF8-216ENST00000573795 SHMT1P34896 483 aa26.76■■□□□ 1.87
SNF8-216ENST00000573795 PLCD1P51178 756 aa26.76■■□□□ 1.87
SNF8-216ENST00000573795 ZYXQ15942 572 aaKnown RBP26.76■■□□□ 1.87
SNF8-216ENST00000573795 MORN1Q5T089 497 aa26.76■■□□□ 1.87
SNF8-216ENST00000573795 TMED8Q6PL24 325 aaPredicted RBP26.76■■□□□ 1.87
SNF8-216ENST00000573795 GPR142Q7Z601 462 aa26.76■■□□□ 1.87
SNF8-216ENST00000573795 GTF3C2Q8WUA4 911 aaPredicted RBP26.76■■□□□ 1.87
SNF8-216ENST00000573795 PAGR1Q9BTK6 254 aa26.76■■□□□ 1.87
SNF8-216ENST00000573795 OGDHLQ9ULD0 1010 aa26.76■■□□□ 1.87
SNF8-216ENST00000573795 ZBED9Q6R2W3 1325 aa26.75■■□□□ 1.87
SNF8-216ENST00000573795 EVX2Q03828 476 aa26.75■■□□□ 1.87
SNF8-216ENST00000573795 RHPN1Q8TCX5 695 aa26.75■■□□□ 1.87
SNF8-216ENST00000573795 ACER1Q8TDN7 264 aa26.75■■□□□ 1.87
SNF8-216ENST00000573795 GUCY1A2P33402 732 aa26.74■■□□□ 1.87
SNF8-216ENST00000573795 CCL14Q16627 93 aa26.74■■□□□ 1.87
SNF8-216ENST00000573795 FRMPD3Q5JV73 1810 aa26.74■■□□□ 1.87
SNF8-216ENST00000573795 GABPAQ06546 454 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms