RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 SPATA32Q96LK8 384 aa16.16■□□□□ 0.18
TVP23A-207ENST00000573360 TTC12Q9H892 705 aaPredicted RBP16.16■□□□□ 0.18
TVP23A-207ENST00000573360 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
TVP23A-207ENST00000573360 KRT85P78386 507 aa16.16■□□□□ 0.18
TVP23A-207ENST00000573360 C17orf53Q8N3J3 647 aaPredicted RBP16.16■□□□□ 0.18
TVP23A-207ENST00000573360 JDP2Q8WYK2 163 aa16.16■□□□□ 0.18
TVP23A-207ENST00000573360 KAT14Q9H8E8 782 aa16.16■□□□□ 0.18
TVP23A-207ENST00000573360 DDX4Q9NQI0 724 aaKnown RBP16.16■□□□□ 0.18
TVP23A-207ENST00000573360 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
TVP23A-207ENST00000573360 CICQ96RK0 1608 aaPredicted RBP16.16■□□□□ 0.18
TVP23A-207ENST00000573360 HMGN5P82970 282 aaKnown RBP16.15■□□□□ 0.18
TVP23A-207ENST00000573360 DALRD3Q5D0E6 543 aaKnown RBP16.15■□□□□ 0.18
TVP23A-207ENST00000573360 CCDC183Q5T5S1 534 aa16.15■□□□□ 0.18
TVP23A-207ENST00000573360 PODNQ7Z5L7 613 aa16.15■□□□□ 0.18
TVP23A-207ENST00000573360 TRIM22Q8IYM9 498 aa16.15■□□□□ 0.18
TVP23A-207ENST00000573360 OGFOD1Q8N543 542 aa16.15■□□□□ 0.18
TVP23A-207ENST00000573360 ARPP21Q9UBL0 812 aaPredicted RBP16.15■□□□□ 0.18
TVP23A-207ENST00000573360 PLEKHA8P1O95397 391 aa16.15■□□□□ 0.18
TVP23A-207ENST00000573360 SSRP1Q08945 709 aaKnown RBP16.15■□□□□ 0.18
TVP23A-207ENST00000573360 FLT1P17948 1338 aa16.15■□□□□ 0.18
TVP23A-207ENST00000573360 ADCY5O95622 1261 aa16.15■□□□□ 0.18
TVP23A-207ENST00000573360 CSPP1Q1MSJ5 1256 aa16.15■□□□□ 0.18
TVP23A-207ENST00000573360 RREB1Q92766 1687 aa16.14■□□□□ 0.17
TVP23A-207ENST00000573360 FDPSP14324 419 aaKnown RBP16.14■□□□□ 0.17
TVP23A-207ENST00000573360 LRRC47Q8N1G4 583 aaKnown RBP16.14■□□□□ 0.17
TVP23A-207ENST00000573360 NLGN2Q8NFZ4 835 aa16.14■□□□□ 0.17
TVP23A-207ENST00000573360 CTCFLQ8NI51 663 aaPredicted RBP16.14■□□□□ 0.17
TVP23A-207ENST00000573360 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.14■□□□□ 0.17
TVP23A-207ENST00000573360 NIM1KQ8IY84 436 aa16.14■□□□□ 0.17
TVP23A-207ENST00000573360 ME1P48163 572 aa16.14■□□□□ 0.17
TVP23A-207ENST00000573360 RASSF7Q02833 373 aa16.14■□□□□ 0.17
TVP23A-207ENST00000573360 C12orf60Q5U649 245 aa16.14■□□□□ 0.17
TVP23A-207ENST00000573360 CDC42EP5Q6NZY7 148 aa16.14■□□□□ 0.17
TVP23A-207ENST00000573360 DRC7Q8IY82 874 aa16.14■□□□□ 0.17
TVP23A-207ENST00000573360 FANCBQ8NB91 859 aa16.14■□□□□ 0.17
TVP23A-207ENST00000573360 PDLIM2Q96JY6 352 aa16.14■□□□□ 0.17
TVP23A-207ENST00000573360 IRS2Q9Y4H2 1338 aa16.13■□□□□ 0.17
TVP23A-207ENST00000573360 SHTN1A0MZ66 631 aa16.13■□□□□ 0.17
TVP23A-207ENST00000573360 PSMD14O00487 310 aa16.13■□□□□ 0.17
TVP23A-207ENST00000573360 SHROOM1Q2M3G4 852 aaPredicted RBP16.13■□□□□ 0.17
TVP23A-207ENST00000573360 VPS54Q9P1Q0 977 aa16.13■□□□□ 0.17
TVP23A-207ENST00000573360 YDJCA8MPS7 323 aa16.13■□□□□ 0.17
TVP23A-207ENST00000573360 CDK8P49336 464 aa16.13■□□□□ 0.17
TVP23A-207ENST00000573360 HS1BP3Q53T59 392 aa16.13■□□□□ 0.17
TVP23A-207ENST00000573360 PLCG2P16885 1265 aa16.13■□□□□ 0.17
TVP23A-207ENST00000573360 CFAP100Q494V2 611 aa16.13■□□□□ 0.17
TVP23A-207ENST00000573360 GDF11O95390 407 aa16.12■□□□□ 0.17
TVP23A-207ENST00000573360 MARCKSP29966 332 aaPredicted RBP16.12■□□□□ 0.17
TVP23A-207ENST00000573360 ARHGAP27Q6ZUM4 889 aa16.12■□□□□ 0.17
TVP23A-207ENST00000573360 MIGA2Q7L4E1 593 aa16.12■□□□□ 0.17
TVP23A-207ENST00000573360 IL17RAQ96F46 866 aa16.12■□□□□ 0.17
TVP23A-207ENST00000573360 MTFR1LQ9H019 292 aa16.12■□□□□ 0.17
TVP23A-207ENST00000573360 GPR75-ASB3A0A0A6YYF3 556 aa16.12■□□□□ 0.17
TVP23A-207ENST00000573360 UBE2HP62256 183 aa16.12■□□□□ 0.17
TVP23A-207ENST00000573360 IKQ13123 557 aaPredicted RBP16.12■□□□□ 0.17
TVP23A-207ENST00000573360 PRMT6Q96LA8 375 aaPredicted RBP16.12■□□□□ 0.17
TVP23A-207ENST00000573360 RHBDL3P58872 404 aa16.12■□□□□ 0.17
TVP23A-207ENST00000573360 TTC6Q86TZ1 520 aa16.11■□□□□ 0.17
TVP23A-207ENST00000573360 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
TVP23A-207ENST00000573360 CDKL5O76039 1030 aa16.11■□□□□ 0.17
TVP23A-207ENST00000573360 ZYXQ15942 572 aaKnown RBP16.11■□□□□ 0.17
TVP23A-207ENST00000573360 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
TVP23A-207ENST00000573360 UPF1Q92900 1129 aaKnown RBP eCLIP16.11■□□□□ 0.17
TVP23A-207ENST00000573360 UBA5Q9GZZ9 404 aa16.11■□□□□ 0.17
TVP23A-207ENST00000573360 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.11■□□□□ 0.17
TVP23A-207ENST00000573360 ZMYM6O95789 1325 aa16.11■□□□□ 0.17
TVP23A-207ENST00000573360 LRP5O75197 1615 aa16.11■□□□□ 0.17
TVP23A-207ENST00000573360 MYH13Q9UKX3 1938 aa16.11■□□□□ 0.17
TVP23A-207ENST00000573360 KRT40Q6A162 431 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 CKAP2LQ8IYA6 745 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 TAOK3Q9H2K8 898 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 STK38Q15208 465 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 USP17L2Q6R6M4 530 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 GPKOWQ92917 476 aaPredicted RBP eCLIP16.1■□□□□ 0.17
TVP23A-207ENST00000573360 CLIP2Q9UDT6 1046 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 HLA-DOAP06340 250 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 DLGAP5Q15398 846 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 DACT2Q5SW24 774 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 STAG2Q8N3U4 1231 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 SLC16A10Q8TF71 515 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 ERCC4Q92889 916 aaPredicted RBP16.1■□□□□ 0.17
TVP23A-207ENST00000573360 USP28Q96RU2 1077 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 GPCPD1Q9NPB8 672 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 TMOD2Q9NZR1 351 aa16.1■□□□□ 0.17
TVP23A-207ENST00000573360 APOBEC3HQ6NTF7 200 aaKnown RBP16.09■□□□□ 0.17
TVP23A-207ENST00000573360 TICAM2Q86XR7 235 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 BTBD18B2RXH4 712 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 ZNF500O60304 480 aaPredicted RBP16.09■□□□□ 0.17
TVP23A-207ENST00000573360 NR5A1Q13285 461 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 PRKG1Q13976 671 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 SAFBQ15424 915 aaKnown RBP eCLIP16.09■□□□□ 0.17
TVP23A-207ENST00000573360 CCDC96Q2M329 555 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 STRIP1Q5VSL9 837 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 PRAMEF18Q5VWM3 479 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 RTKN2Q8IZC4 609 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 TSC1Q92574 1164 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 BAZ2AQ9UIF9 1905 aaKnown RBP16.09■□□□□ 0.17
TVP23A-207ENST00000573360 WDHD1O75717 1129 aaPredicted RBP16.09■□□□□ 0.17
TVP23A-207ENST00000573360 KCNA3P22001 575 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 CEP95Q96GE4 821 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms