RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ANAPC4Q9UJX5 808 aa20.59■□□□□ 0.89
LITAF-212ENST00000573332 MANSC4A6NHS7 340 aaPredicted RBP20.58■□□□□ 0.89
LITAF-212ENST00000573332 MINDY4BA8MYZ0 360 aa20.58■□□□□ 0.89
LITAF-212ENST00000573332 TM4SF4P48230 202 aa20.58■□□□□ 0.89
LITAF-212ENST00000573332 PPARAQ07869 468 aa20.58■□□□□ 0.89
LITAF-212ENST00000573332 MS4A4AQ96JQ5 239 aa20.58■□□□□ 0.89
LITAF-212ENST00000573332 CCDC17Q96LX7 622 aa20.58■□□□□ 0.89
LITAF-212ENST00000573332 KCNH4Q9UQ05 1017 aa20.58■□□□□ 0.89
LITAF-212ENST00000573332 TESPA1A2RU30 521 aaPredicted RBP20.57■□□□□ 0.88
LITAF-212ENST00000573332 IRF6O14896 467 aa20.57■□□□□ 0.88
LITAF-212ENST00000573332 JAG1P78504 1218 aa20.57■□□□□ 0.88
LITAF-212ENST00000573332 MAP2K1Q02750 393 aaPredicted RBP20.57■□□□□ 0.88
LITAF-212ENST00000573332 SLC44A5Q8NCS7 719 aa20.57■□□□□ 0.88
LITAF-212ENST00000573332 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.57■□□□□ 0.88
LITAF-212ENST00000573332 ZBTB21Q9ULJ3 1066 aa20.57■□□□□ 0.88
LITAF-212ENST00000573332 AFG3L2Q9Y4W6 797 aa20.57■□□□□ 0.88
LITAF-212ENST00000573332 ZHX2Q9Y6X8 837 aa20.57■□□□□ 0.88
LITAF-212ENST00000573332 CEP350Q5VT06 3117 aa20.57■□□□□ 0.88
LITAF-212ENST00000573332 USP17L5A8MUK1 530 aa20.56■□□□□ 0.88
LITAF-212ENST00000573332 CXCL11O14625 94 aa20.56■□□□□ 0.88
LITAF-212ENST00000573332 GDF11O95390 407 aa20.56■□□□□ 0.88
LITAF-212ENST00000573332 GTF2A2P52657 109 aa20.56■□□□□ 0.88
LITAF-212ENST00000573332 SREBF2Q12772 1141 aa20.56■□□□□ 0.88
LITAF-212ENST00000573332 MKRN3Q13064 507 aaKnown RBP20.56■□□□□ 0.88
LITAF-212ENST00000573332 ABCB5Q2M3G0 1257 aa20.56■□□□□ 0.88
LITAF-212ENST00000573332 ZNF287Q9HBT7 754 aa20.56■□□□□ 0.88
LITAF-212ENST00000573332 CABP5Q9NP86 173 aa20.56■□□□□ 0.88
LITAF-212ENST00000573332 BAZ2AQ9UIF9 1905 aaKnown RBP20.55■□□□□ 0.88
LITAF-212ENST00000573332 CDC45O75419 566 aa20.55■□□□□ 0.88
LITAF-212ENST00000573332 SLC3A2P08195 630 aaKnown RBP20.55■□□□□ 0.88
LITAF-212ENST00000573332 SNAPC2Q13487 334 aa20.55■□□□□ 0.88
LITAF-212ENST00000573332 ESYT1Q9BSJ8 1104 aa20.55■□□□□ 0.88
LITAF-212ENST00000573332 WDR18Q9BV38 432 aa20.55■□□□□ 0.88
LITAF-212ENST00000573332 AS3MTQ9HBK9 375 aa20.55■□□□□ 0.88
LITAF-212ENST00000573332 WBP1LQ9NX94 342 aa20.55■□□□□ 0.88
LITAF-212ENST00000573332 GH2P01242 217 aa20.54■□□□□ 0.88
LITAF-212ENST00000573332 FGRP09769 529 aa20.54■□□□□ 0.88
LITAF-212ENST00000573332 CTNNA3Q9UI47 895 aa20.54■□□□□ 0.88
LITAF-212ENST00000573332 DOCK1Q14185 1865 aa20.54■□□□□ 0.88
LITAF-212ENST00000573332 CETPP11597 493 aa20.53■□□□□ 0.88
LITAF-212ENST00000573332 RASA1P20936 1047 aa20.53■□□□□ 0.88
LITAF-212ENST00000573332 GUCY1A2P33402 732 aa20.53■□□□□ 0.88
LITAF-212ENST00000573332 PDE4BQ07343 736 aa20.53■□□□□ 0.88
LITAF-212ENST00000573332 SHROOM1Q2M3G4 852 aaPredicted RBP20.53■□□□□ 0.88
LITAF-212ENST00000573332 CASC1Q6TDU7 716 aa20.53■□□□□ 0.88
LITAF-212ENST00000573332 TMEM179Q6ZVK1 233 aa20.53■□□□□ 0.88
LITAF-212ENST00000573332 ZNF280CQ8ND82 737 aa20.53■□□□□ 0.88
LITAF-212ENST00000573332 MKNK2Q9HBH9 465 aa20.53■□□□□ 0.88
LITAF-212ENST00000573332 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.53■□□□□ 0.88
LITAF-212ENST00000573332 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.53■□□□□ 0.88
LITAF-212ENST00000573332 PCP11498 1178 aaKnown RBP20.52■□□□□ 0.88
LITAF-212ENST00000573332 AKR1B1P15121 316 aa20.52■□□□□ 0.88
LITAF-212ENST00000573332 CCDC84Q86UT8 332 aaPredicted RBP20.52■□□□□ 0.88
LITAF-212ENST00000573332 BRI3BPQ8WY22 251 aa20.52■□□□□ 0.88
LITAF-212ENST00000573332 CCL15-CCL14A0A0B4J2E2 113 aa20.51■□□□□ 0.87
LITAF-212ENST00000573332 A0A0G2JLL6 359 aaPredicted RBP20.51■□□□□ 0.87
LITAF-212ENST00000573332 PTH1RQ03431 593 aa20.51■□□□□ 0.87
LITAF-212ENST00000573332 SPP2Q13103 211 aa20.51■□□□□ 0.87
LITAF-212ENST00000573332 CCL15Q16663 113 aa20.51■□□□□ 0.87
LITAF-212ENST00000573332 SH3D19Q5HYK7 790 aa20.51■□□□□ 0.87
LITAF-212ENST00000573332 PRRT2Q7Z6L0 340 aaPredicted RBP20.51■□□□□ 0.87
LITAF-212ENST00000573332 MAP4K1Q92918 833 aa20.51■□□□□ 0.87
LITAF-212ENST00000573332 LAMB1P07942 1786 aa20.51■□□□□ 0.87
LITAF-212ENST00000573332 ZNF213O14771 459 aa20.5■□□□□ 0.87
LITAF-212ENST00000573332 CA12O43570 354 aa20.5■□□□□ 0.87
LITAF-212ENST00000573332 ORC4O43929 436 aa20.5■□□□□ 0.87
LITAF-212ENST00000573332 CTDSPL2Q05D32 466 aa20.5■□□□□ 0.87
LITAF-212ENST00000573332 MOGSQ13724 837 aa20.5■□□□□ 0.87
LITAF-212ENST00000573332 SEPT2Q15019 361 aa20.5■□□□□ 0.87
LITAF-212ENST00000573332 IFNL1Q8IU54 200 aa20.5■□□□□ 0.87
LITAF-212ENST00000573332 ZNF444Q8N0Y2 327 aaPredicted RBP20.5■□□□□ 0.87
LITAF-212ENST00000573332 PTPN18Q99952 460 aa20.5■□□□□ 0.87
LITAF-212ENST00000573332 ZCCHC17Q9NP64 241 aaKnown RBP20.5■□□□□ 0.87
LITAF-212ENST00000573332 SAGE1Q9NXZ1 904 aa20.5■□□□□ 0.87
LITAF-212ENST00000573332 C19orf81C9J6K1 198 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 MPHOSPH10O00566 681 aaKnown RBP20.49■□□□□ 0.87
LITAF-212ENST00000573332 ALDH1A1P00352 501 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 NT5C2P49902 561 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 BACE1P56817 501 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 RAB3GAP1Q15042 981 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 IMMTQ16891 758 aaKnown RBP20.49■□□□□ 0.87
LITAF-212ENST00000573332 OTUD7BQ6GQQ9 843 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 KIAA1211Q6ZU35 1233 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 FASTKD5Q7L8L6 764 aaKnown RBP20.49■□□□□ 0.87
LITAF-212ENST00000573332 STK11IPQ8N1F8 1099 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 STAG1Q8WVM7 1258 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.49■□□□□ 0.87
LITAF-212ENST00000573332 LSG1Q9H089 658 aaKnown RBP20.49■□□□□ 0.87
LITAF-212ENST00000573332 NBPF3Q9H094 633 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 TACC3Q9Y6A5 838 aa20.49■□□□□ 0.87
LITAF-212ENST00000573332 U3KPZ7 1027 aaPredicted RBP20.49■□□□□ 0.87
LITAF-212ENST00000573332 TRIM75PA6NK02 468 aa20.48■□□□□ 0.87
LITAF-212ENST00000573332 USP17L10C9JJH3 530 aa20.48■□□□□ 0.87
LITAF-212ENST00000573332 IGF2BP3O00425 579 aaKnown RBP eCLIP20.48■□□□□ 0.871e-9■■□□□ 11.5
LITAF-212ENST00000573332 PRDM1O75626 825 aa20.48■□□□□ 0.87
LITAF-212ENST00000573332 AKNAD1Q5T1N1 836 aa20.48■□□□□ 0.87
LITAF-212ENST00000573332 BEGAINQ9BUH8 593 aa20.48■□□□□ 0.87
LITAF-212ENST00000573332 CFHR5Q9BXR6 569 aa20.48■□□□□ 0.87
LITAF-212ENST00000573332 RNF41Q9H4P4 317 aaPredicted RBP20.48■□□□□ 0.87
LITAF-212ENST00000573332 KANSL2Q9H9L4 492 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms