RNA–Protein interactions for RNA: ENST00000572650.1

ABR-219, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-219ENST00000572650 HMX1Q9NP08 348 aaPredicted RBP21.3■■□□□ 1
ABR-219ENST00000572650 ALPK3Q96L96 1907 aa21.29■■□□□ 1
ABR-219ENST00000572650 CCDC158Q5M9N0 1113 aa21.29■■□□□ 1
ABR-219ENST00000572650 TTC39AQ5SRH9 613 aa21.29■■□□□ 1
ABR-219ENST00000572650 MAPKAPK5Q8IW41 473 aa21.29■■□□□ 1
ABR-219ENST00000572650 TRIB2Q92519 343 aa21.29■■□□□ 1
ABR-219ENST00000572650 TXNRD2Q9NNW7 524 aa21.29■■□□□ 1
ABR-219ENST00000572650 SNRKQ9NRH2 765 aa21.29■■□□□ 1
ABR-219ENST00000572650 TMOD4Q9NZQ9 345 aa21.29■■□□□ 1
ABR-219ENST00000572650 OGDHLQ9ULD0 1010 aa21.29■■□□□ 1
ABR-219ENST00000572650 FOCADQ5VW36 1801 aa21.28■■□□□ 1
ABR-219ENST00000572650 USP17L10C9JJH3 530 aa21.28■■□□□ 1
ABR-219ENST00000572650 XRCC5P13010 732 aaKnown RBP21.28■■□□□ 1
ABR-219ENST00000572650 BMP8BP34820 402 aa21.28■■□□□ 1
ABR-219ENST00000572650 HERVK_113P62684 666 aa21.28■■□□□ 1
ABR-219ENST00000572650 IRX3P78415 501 aaPredicted RBP21.28■■□□□ 1
ABR-219ENST00000572650 ATP8B2P98198 1209 aa21.28■■□□□ 1
ABR-219ENST00000572650 TMEM57Q8N5G2 664 aa21.28■■□□□ 1
ABR-219ENST00000572650 FRAT1Q92837 279 aaPredicted RBP21.28■■□□□ 1
ABR-219ENST00000572650 CLUAP1Q96AJ1 413 aa21.28■■□□□ 1
ABR-219ENST00000572650 GDF15Q99988 308 aa21.28■■□□□ 1
ABR-219ENST00000572650 STAP2Q9UGK3 403 aa21.28■■□□□ 1
ABR-219ENST00000572650 SOX1O00570 391 aaPredicted RBP21.27■■□□□ 1
ABR-219ENST00000572650 SHROOM1Q2M3G4 852 aaPredicted RBP21.27■■□□□ 1
ABR-219ENST00000572650 GPRC5AQ8NFJ5 357 aa21.27■■□□□ 1
ABR-219ENST00000572650 SOCS4Q8WXH5 440 aa21.27■■□□□ 1
ABR-219ENST00000572650 USP6NLQ92738 828 aa21.27■■□□□ 1
ABR-219ENST00000572650 NBPF3Q9H094 633 aa21.27■■□□□ 1
ABR-219ENST00000572650 RBPJLQ9UBG7 517 aa21.27■■□□□ 1
ABR-219ENST00000572650 PALD1Q9ULE6 856 aa21.27■■□□□ 1
ABR-219ENST00000572650 ZBTB21Q9ULJ3 1066 aa21.27■■□□□ 1
ABR-219ENST00000572650 CDK5RAP2Q96SN8 1893 aa21.26■□□□□ 0.99
ABR-219ENST00000572650 GTF3C2Q8WUA4 911 aaPredicted RBP21.26■□□□□ 0.99
ABR-219ENST00000572650 NUDT12Q9BQG2 462 aa21.26■□□□□ 0.99
ABR-219ENST00000572650 PIH1D3Q9NQM4 214 aaKnown RBP21.26■□□□□ 0.99
ABR-219ENST00000572650 NOP58Q9Y2X3 529 aaKnown RBP21.26■□□□□ 0.99
ABR-219ENST00000572650 PEX10O60683 326 aa21.25■□□□□ 0.99
ABR-219ENST00000572650 GDF11O95390 407 aa21.25■□□□□ 0.99
ABR-219ENST00000572650 CYP2B6P20813 491 aa21.25■□□□□ 0.99
ABR-219ENST00000572650 MAPK4P31152 587 aa21.25■□□□□ 0.99
ABR-219ENST00000572650 ZAP70P43403 619 aa21.25■□□□□ 0.99
ABR-219ENST00000572650 POTEEQ6S8J3 1075 aa21.25■□□□□ 0.99
ABR-219ENST00000572650 TRMT44Q8IYL2 757 aaKnown RBP21.25■□□□□ 0.99
ABR-219ENST00000572650 CRACR2BQ8N4Y2 399 aaPredicted RBP21.25■□□□□ 0.99
ABR-219ENST00000572650 EMILIN3Q9NT22 766 aa21.25■□□□□ 0.99
ABR-219ENST00000572650 ERVK-9P63128 1117 aa21.24■□□□□ 0.99
ABR-219ENST00000572650 ERVK-24P63145 666 aa21.24■□□□□ 0.99
ABR-219ENST00000572650 Q3C1V9 767 aa21.24■□□□□ 0.99
ABR-219ENST00000572650 ZKSCAN2Q63HK3 967 aa21.24■□□□□ 0.99
ABR-219ENST00000572650 C12orf42Q96LP6 360 aa21.24■□□□□ 0.99
ABR-219ENST00000572650 C11orf49Q9H6J7 331 aa21.24■□□□□ 0.99
ABR-219ENST00000572650 DBNLQ9UJU6 430 aaKnown RBP21.24■□□□□ 0.99
ABR-219ENST00000572650 SURF6O75683 361 aaKnown RBP21.23■□□□□ 0.99
ABR-219ENST00000572650 HLA-DOAP06340 250 aa21.23■□□□□ 0.99
ABR-219ENST00000572650 PRKAR2AP13861 404 aaKnown RBP21.23■□□□□ 0.99
ABR-219ENST00000572650 MORN1Q5T089 497 aa21.23■□□□□ 0.99
ABR-219ENST00000572650 TATDN1Q6P1N9 297 aa21.23■□□□□ 0.99
ABR-219ENST00000572650 C7orf61Q8IZ16 206 aa21.23■□□□□ 0.99
ABR-219ENST00000572650 LRCH3Q96II8 777 aa21.23■□□□□ 0.99
ABR-219ENST00000572650 TRIM34Q9BYJ4 488 aa21.23■□□□□ 0.99
ABR-219ENST00000572650 DDX60LQ5H9U9 1706 aaKnown RBP21.22■□□□□ 0.99
ABR-219ENST00000572650 DYNLL1P63167 89 aaKnown RBP21.22■□□□□ 0.99
ABR-219ENST00000572650 GPR153Q6NV75 609 aa21.22■□□□□ 0.99
ABR-219ENST00000572650 USP17L2Q6R6M4 530 aa21.22■□□□□ 0.99
ABR-219ENST00000572650 CERS3Q8IU89 383 aa21.22■□□□□ 0.99
ABR-219ENST00000572650 PORCNQ9H237 461 aa21.22■□□□□ 0.99
ABR-219ENST00000572650 SAP30BPQ9UHR5 308 aaKnown RBP21.22■□□□□ 0.99
ABR-219ENST00000572650 COL6A3P12111 3177 aa21.21■□□□□ 0.99
ABR-219ENST00000572650 CYP7A1P22680 504 aa21.21■□□□□ 0.99
ABR-219ENST00000572650 CACNB2Q08289 660 aaPredicted RBP21.21■□□□□ 0.99
ABR-219ENST00000572650 OS9Q13438 667 aaPredicted RBP21.21■□□□□ 0.99
ABR-219ENST00000572650 TMED8Q6PL24 325 aaPredicted RBP21.21■□□□□ 0.99
ABR-219ENST00000572650 GPR142Q7Z601 462 aa21.21■□□□□ 0.99
ABR-219ENST00000572650 EHD4Q9H223 541 aa21.21■□□□□ 0.99
ABR-219ENST00000572650 TLR7Q9NYK1 1049 aaKnown RBP21.21■□□□□ 0.99
ABR-219ENST00000572650 MYO5AQ9Y4I1 1855 aaKnown RBP21.21■□□□□ 0.99
ABR-219ENST00000572650 PFASO15067 1338 aa21.21■□□□□ 0.99
ABR-219ENST00000572650 GH2P01242 217 aa21.2■□□□□ 0.98
ABR-219ENST00000572650 COL6A1P12109 1028 aa21.2■□□□□ 0.98
ABR-219ENST00000572650 RGS2P41220 211 aa21.2■□□□□ 0.98
ABR-219ENST00000572650 PDE3AQ14432 1141 aa21.2■□□□□ 0.98
ABR-219ENST00000572650 LHX8Q68G74 356 aa21.2■□□□□ 0.98
ABR-219ENST00000572650 PLEKHH3Q7Z736 793 aa21.2■□□□□ 0.98
ABR-219ENST00000572650 EAF2Q96CJ1 260 aaPredicted RBP21.2■□□□□ 0.98
ABR-219ENST00000572650 ZMYND8Q9ULU4 1186 aaPredicted RBP21.2■□□□□ 0.98
ABR-219ENST00000572650 ZKSCAN1P17029 563 aaPredicted RBP21.19■□□□□ 0.98
ABR-219ENST00000572650 APBA2Q99767 749 aa21.19■□□□□ 0.98
ABR-219ENST00000572650 RABGAP1Q9Y3P9 1069 aa21.19■□□□□ 0.98
ABR-219ENST00000572650 CNMDO75829 334 aa21.18■□□□□ 0.98
ABR-219ENST00000572650 LRIT3Q3SXY7 679 aa21.18■□□□□ 0.98
ABR-219ENST00000572650 CCDC8Q9H0W5 538 aaPredicted RBP21.18■□□□□ 0.98
ABR-219ENST00000572650 C1orf115Q9H7X2 142 aa21.18■□□□□ 0.98
ABR-219ENST00000572650 SERPINB13Q9UIV8 391 aa21.18■□□□□ 0.98
ABR-219ENST00000572650 USP17L15C9J2P7 530 aa21.17■□□□□ 0.98
ABR-219ENST00000572650 USP17L13C9JLJ4 530 aa21.17■□□□□ 0.98
ABR-219ENST00000572650 USP17L11C9JVI0 530 aa21.17■□□□□ 0.98
ABR-219ENST00000572650 USP17L18D6R9N7 530 aa21.17■□□□□ 0.98
ABR-219ENST00000572650 USP17L22D6RA61 530 aa21.17■□□□□ 0.98
ABR-219ENST00000572650 USP17L17D6RBQ6 530 aa21.17■□□□□ 0.98
ABR-219ENST00000572650 USP17L19D6RCP7 530 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms