RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 LARGE2Q8N3Y3 721 aa22.62■■□□□ 1.21
RPAIN-210ENST00000571613 MYL10Q9BUA6 226 aa22.62■■□□□ 1.21
RPAIN-210ENST00000571613 ELP1O95163 1332 aa22.61■■□□□ 1.21
RPAIN-210ENST00000571613 WDHD1O75717 1129 aaPredicted RBP22.61■■□□□ 1.21
RPAIN-210ENST00000571613 TRIM29Q14134 588 aa22.61■■□□□ 1.21
RPAIN-210ENST00000571613 FAM47AQ5JRC9 791 aa22.61■■□□□ 1.21
RPAIN-210ENST00000571613 CCDC144CPQ8IYA2 1237 aa22.61■■□□□ 1.21
RPAIN-210ENST00000571613 SYAP1Q96A49 352 aaPredicted RBP22.61■■□□□ 1.21
RPAIN-210ENST00000571613 DYNLL2Q96FJ2 89 aa22.61■■□□□ 1.21
RPAIN-210ENST00000571613 MAP3K14Q99558 947 aa22.61■■□□□ 1.21
RPAIN-210ENST00000571613 KCNQ5Q9NR82 932 aa22.61■■□□□ 1.21
RPAIN-210ENST00000571613 ISY1Q9ULR0 285 aaKnown RBP22.61■■□□□ 1.21
RPAIN-210ENST00000571613 CDK8P49336 464 aa22.6■■□□□ 1.21
RPAIN-210ENST00000571613 R3HDM1Q15032 1099 aaKnown RBP22.6■■□□□ 1.21
RPAIN-210ENST00000571613 CDC42EP5Q6NZY7 148 aa22.6■■□□□ 1.21
RPAIN-210ENST00000571613 CHAMP1Q96JM3 812 aa22.6■■□□□ 1.21
RPAIN-210ENST00000571613 ZNF396Q96N95 335 aaPredicted RBP22.6■■□□□ 1.21
RPAIN-210ENST00000571613 ALG1Q9BT22 464 aa22.6■■□□□ 1.21
RPAIN-210ENST00000571613 SWAP70Q9UH65 585 aa22.6■■□□□ 1.21
RPAIN-210ENST00000571613 DDX60LQ5H9U9 1706 aaKnown RBP22.59■■□□□ 1.21
RPAIN-210ENST00000571613 CDK5RAP2Q96SN8 1893 aa22.59■■□□□ 1.21
RPAIN-210ENST00000571613 FIBPO43427 364 aa22.59■■□□□ 1.21
RPAIN-210ENST00000571613 HLA-DOAP06340 250 aa22.59■■□□□ 1.21
RPAIN-210ENST00000571613 TROAPQ12815 778 aa22.59■■□□□ 1.21
RPAIN-210ENST00000571613 BRAPQ7Z569 592 aa22.59■■□□□ 1.21
RPAIN-210ENST00000571613 CTCFLQ8NI51 663 aaPredicted RBP22.59■■□□□ 1.21
RPAIN-210ENST00000571613 UPF1Q92900 1129 aaKnown RBP eCLIP22.59■■□□□ 1.21
RPAIN-210ENST00000571613 FOCADQ5VW36 1801 aa22.59■■□□□ 1.21
RPAIN-210ENST00000571613 DEXIO95424 95 aa22.58■■□□□ 1.21
RPAIN-210ENST00000571613 KIF5BP33176 963 aa22.58■■□□□ 1.21
RPAIN-210ENST00000571613 AKAP17AQ02040 695 aaKnown RBP22.58■■□□□ 1.21
RPAIN-210ENST00000571613 EVX2Q03828 476 aa22.58■■□□□ 1.21
RPAIN-210ENST00000571613 CRACR2BQ8N4Y2 399 aaPredicted RBP22.58■■□□□ 1.21
RPAIN-210ENST00000571613 SLC26A6Q9BXS9 759 aa22.58■■□□□ 1.21
RPAIN-210ENST00000571613 RNF26Q9BY78 433 aaPredicted RBP22.58■■□□□ 1.21
RPAIN-210ENST00000571613 OSBPL5Q9H0X9 879 aaPredicted RBP22.58■■□□□ 1.21
RPAIN-210ENST00000571613 GZF1Q9H116 711 aaPredicted RBP22.58■■□□□ 1.21
RPAIN-210ENST00000571613 DHX36Q9H2U1 1008 aaKnown RBP22.58■■□□□ 1.21
RPAIN-210ENST00000571613 KAT14Q9H8E8 782 aa22.58■■□□□ 1.21
RPAIN-210ENST00000571613 RASA1P20936 1047 aa22.58■■□□□ 1.2
RPAIN-210ENST00000571613 RBM5P52756 815 aaKnown RBP eCLIP22.58■■□□□ 1.2
RPAIN-210ENST00000571613 PICALMQ13492 652 aa22.58■■□□□ 1.2
RPAIN-210ENST00000571613 NEDD1Q8NHV4 660 aa22.58■■□□□ 1.2
RPAIN-210ENST00000571613 IDI2Q9BXS1 227 aa22.58■■□□□ 1.2
RPAIN-210ENST00000571613 GDPD2Q9HCC8 539 aa22.58■■□□□ 1.2
RPAIN-210ENST00000571613 HDAC9Q9UKV0 1011 aa22.58■■□□□ 1.2
RPAIN-210ENST00000571613 YDJCA8MPS7 323 aa22.57■■□□□ 1.2
RPAIN-210ENST00000571613 SLC4A8Q2Y0W8 1093 aa22.57■■□□□ 1.2
RPAIN-210ENST00000571613 RSBN1LQ6PCB5 846 aaPredicted RBP22.57■■□□□ 1.2
RPAIN-210ENST00000571613 NIM1KQ8IY84 436 aa22.57■■□□□ 1.2
RPAIN-210ENST00000571613 GPT2Q8TD30 523 aa22.57■■□□□ 1.2
RPAIN-210ENST00000571613 PHKBQ93100 1093 aa22.57■■□□□ 1.2
RPAIN-210ENST00000571613 MYH1P12882 1939 aa22.57■■□□□ 1.2
RPAIN-210ENST00000571613 SCN9AQ15858 1988 aa22.57■■□□□ 1.2
RPAIN-210ENST00000571613 VIL1P09327 827 aaKnown RBP22.56■■□□□ 1.2
RPAIN-210ENST00000571613 XBP1P17861 261 aa22.56■■□□□ 1.2
RPAIN-210ENST00000571613 SPATA32Q96LK8 384 aa22.56■■□□□ 1.2
RPAIN-210ENST00000571613 RBM27Q9P2N5 1060 aaKnown RBP22.56■■□□□ 1.2
RPAIN-210ENST00000571613 ZNRF3Q9ULT6 936 aa22.56■■□□□ 1.2
RPAIN-210ENST00000571613 DEKP35659 375 aaKnown RBP22.55■■□□□ 1.2
RPAIN-210ENST00000571613 GNAQP50148 359 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 MMP14P50281 582 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 GABPAQ06546 454 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 PPP4R3BQ5MIZ7 849 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 RCSD1Q6JBY9 416 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 ILDR1Q86SU0 546 aaPredicted RBP22.55■■□□□ 1.2
RPAIN-210ENST00000571613 NBPF11Q86T75 865 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 SGIP1Q9BQI5 828 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 EHD4Q9H223 541 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 ZNF277Q9NRM2 450 aaPredicted RBP22.55■■□□□ 1.2
RPAIN-210ENST00000571613 SERPINB13Q9UIV8 391 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 TCHHQ07283 1943 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 PPFIA3O75145 1194 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 FOSBP53539 338 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 CAVIN1Q6NZI2 390 aaKnown RBP22.55■■□□□ 1.2
RPAIN-210ENST00000571613 TAOK3Q9H2K8 898 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 IL17RBQ9NRM6 502 aa22.55■■□□□ 1.2
RPAIN-210ENST00000571613 PRPF3O43395 683 aaKnown RBP22.54■■□□□ 1.2
RPAIN-210ENST00000571613 GUCY1B3Q02153 619 aa22.54■■□□□ 1.2
RPAIN-210ENST00000571613 SAFBQ15424 915 aaKnown RBP eCLIP22.54■■□□□ 1.2
RPAIN-210ENST00000571613 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
RPAIN-210ENST00000571613 OGFOD1Q8N543 542 aa22.54■■□□□ 1.2
RPAIN-210ENST00000571613 SLC44A5Q8NCS7 719 aa22.54■■□□□ 1.2
RPAIN-210ENST00000571613 DDX4Q9NQI0 724 aaKnown RBP22.54■■□□□ 1.2
RPAIN-210ENST00000571613 ZNF646O15015 1829 aaPredicted RBP22.53■■□□□ 1.2
RPAIN-210ENST00000571613 PSME4Q14997 1843 aa22.53■■□□□ 1.2
RPAIN-210ENST00000571613 NMT2O60551 498 aa22.53■■□□□ 1.2
RPAIN-210ENST00000571613 KRT40Q6A162 431 aa22.53■■□□□ 1.2
RPAIN-210ENST00000571613 TMTC3Q6ZXV5 915 aa22.53■■□□□ 1.2
RPAIN-210ENST00000571613 PNMA1Q8ND90 353 aa22.53■■□□□ 1.2
RPAIN-210ENST00000571613 AGBL3Q8NEM8 1001 aa22.53■■□□□ 1.2
RPAIN-210ENST00000571613 PLIN4Q96Q06 1357 aa22.53■■□□□ 1.2
RPAIN-210ENST00000571613 GOLGA6L4A6NEF3 574 aa22.52■■□□□ 1.2
RPAIN-210ENST00000571613 CFAP100Q494V2 611 aa22.52■■□□□ 1.2
RPAIN-210ENST00000571613 FAM173BQ6P4H8 233 aa22.52■■□□□ 1.2
RPAIN-210ENST00000571613 LEO1Q8WVC0 666 aaPredicted RBP22.52■■□□□ 1.2
RPAIN-210ENST00000571613 JDP2Q8WYK2 163 aa22.52■■□□□ 1.2
RPAIN-210ENST00000571613 GADD45BO75293 160 aaPredicted RBP22.52■■□□□ 1.2
RPAIN-210ENST00000571613 ENTPD3O75355 529 aa22.52■■□□□ 1.2
RPAIN-210ENST00000571613 KIF23Q02241 960 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms