RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 MFSD14CQ5VZR4 134 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 GPR142Q7Z601 462 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 PLEKHH3Q7Z736 793 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 TEX11Q8IYF3 940 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 MAFAQ8NHW3 353 aaPredicted RBP14.01□□□□□ -0.17
CHMP6-202ENST00000571457 NOL10Q9BSC4 688 aaKnown RBP14.01□□□□□ -0.17
CHMP6-202ENST00000571457 SENP6Q9GZR1 1112 aaPredicted RBP14.01□□□□□ -0.17
CHMP6-202ENST00000571457 COPRSQ9NQ92 184 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 PRDM6Q9NQX0 595 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 RBPJLQ9UBG7 517 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 NCOR1O75376 2440 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 USP17L10C9JJH3 530 aa14□□□□□ -0.17
CHMP6-202ENST00000571457 MAP2K5Q13163 448 aa14□□□□□ -0.17
CHMP6-202ENST00000571457 RRP1BQ14684 758 aaKnown RBP14□□□□□ -0.17
CHMP6-202ENST00000571457 CCL14Q16627 93 aa14□□□□□ -0.17
CHMP6-202ENST00000571457 SSH1Q8WYL5 1049 aa14□□□□□ -0.17
CHMP6-202ENST00000571457 SYMPKQ92797 1274 aaKnown RBP14□□□□□ -0.17
CHMP6-202ENST00000571457 NSUN4Q96CB9 384 aaKnown RBP14□□□□□ -0.17
CHMP6-202ENST00000571457 CDX2Q99626 313 aaPredicted RBP14□□□□□ -0.17
CHMP6-202ENST00000571457 TRIM34Q9BYJ4 488 aa14□□□□□ -0.17
CHMP6-202ENST00000571457 RAI14Q9P0K7 980 aa14□□□□□ -0.17
CHMP6-202ENST00000571457 A0A1B0GUL7 405 aa13.99□□□□□ -0.17
CHMP6-202ENST00000571457 CCNA1P78396 465 aa13.99□□□□□ -0.17
CHMP6-202ENST00000571457 ZNF384Q8TF68 577 aa13.99□□□□□ -0.17
CHMP6-202ENST00000571457 EDC3Q96F86 508 aaKnown RBP13.99□□□□□ -0.17
CHMP6-202ENST00000571457 XAGE2Q96GT9 111 aa13.99□□□□□ -0.17
CHMP6-202ENST00000571457 PAGR1Q9BTK6 254 aa13.99□□□□□ -0.17
CHMP6-202ENST00000571457 PORCNQ9H237 461 aa13.99□□□□□ -0.17
CHMP6-202ENST00000571457 PA2G4Q9UQ80 394 aaKnown RBP13.99□□□□□ -0.17
CHMP6-202ENST00000571457 EYSQ5T1H1 3165 aa13.99□□□□□ -0.17
CHMP6-202ENST00000571457 DNM1LO00429 736 aa13.98□□□□□ -0.17
CHMP6-202ENST00000571457 PEX10O60683 326 aa13.98□□□□□ -0.17
CHMP6-202ENST00000571457 BAG3O95817 575 aa13.98□□□□□ -0.17
CHMP6-202ENST00000571457 PLCG2P16885 1265 aa13.98□□□□□ -0.17
CHMP6-202ENST00000571457 Q3C1V9 767 aa13.98□□□□□ -0.17
CHMP6-202ENST00000571457 GORABQ5T7V8 394 aa13.98□□□□□ -0.17
CHMP6-202ENST00000571457 FOXP4Q8IVH2 680 aaPredicted RBP13.98□□□□□ -0.17
CHMP6-202ENST00000571457 CRACR2BQ8N4Y2 399 aaPredicted RBP13.98□□□□□ -0.17
CHMP6-202ENST00000571457 SPATA5Q8NB90 893 aa13.98□□□□□ -0.17
CHMP6-202ENST00000571457 LPAR1Q92633 364 aa13.98□□□□□ -0.17
CHMP6-202ENST00000571457 SEMA6BQ9H3T3 888 aa13.98□□□□□ -0.17
CHMP6-202ENST00000571457 HMG20BQ9P0W2 317 aa13.98□□□□□ -0.17
CHMP6-202ENST00000571457 DDX20Q9UHI6 824 aaKnown RBP13.98□□□□□ -0.17
CHMP6-202ENST00000571457 MAST2Q6P0Q8 1798 aa13.97□□□□□ -0.17
CHMP6-202ENST00000571457 SLC15A5A6NIM6 579 aa13.97□□□□□ -0.17
CHMP6-202ENST00000571457 CNGA1P29973 690 aa13.97□□□□□ -0.17
CHMP6-202ENST00000571457 ATN1P54259 1190 aaPredicted RBP13.97□□□□□ -0.17
CHMP6-202ENST00000571457 RTP1P59025 263 aa13.97□□□□□ -0.17
CHMP6-202ENST00000571457 ATP2B2Q01814 1243 aa13.97□□□□□ -0.17
CHMP6-202ENST00000571457 ALDH1L2Q3SY69 923 aa13.97□□□□□ -0.17
CHMP6-202ENST00000571457 RABGAP1Q9Y3P9 1069 aa13.97□□□□□ -0.17
CHMP6-202ENST00000571457 BDP1A6H8Y1 2624 aa13.97□□□□□ -0.17
CHMP6-202ENST00000571457 SMAD3P84022 425 aaKnown RBP13.96□□□□□ -0.17
CHMP6-202ENST00000571457 TFCP2Q12800 502 aa13.96□□□□□ -0.17
CHMP6-202ENST00000571457 USP17L2Q6R6M4 530 aa13.96□□□□□ -0.17
CHMP6-202ENST00000571457 ATF7IPQ6VMQ6 1270 aa13.96□□□□□ -0.17
CHMP6-202ENST00000571457 TBC1D9Q6ZT07 1266 aa13.96□□□□□ -0.17
CHMP6-202ENST00000571457 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
CHMP6-202ENST00000571457 ARRDC4Q8NCT1 418 aa13.96□□□□□ -0.17
CHMP6-202ENST00000571457 SH3RF3Q8TEJ3 882 aaPredicted RBP13.96□□□□□ -0.17
CHMP6-202ENST00000571457 NEUROD6Q96NK8 337 aa13.96□□□□□ -0.17
CHMP6-202ENST00000571457 LRP2BPQ9P2M1 347 aa13.96□□□□□ -0.17
CHMP6-202ENST00000571457 ZBTB21Q9ULJ3 1066 aa13.96□□□□□ -0.17
CHMP6-202ENST00000571457 IVNS1ABPQ9Y6Y0 642 aa13.96□□□□□ -0.17
CHMP6-202ENST00000571457 ZNF521Q96K83 1311 aa13.95□□□□□ -0.18
CHMP6-202ENST00000571457 CDH23Q9H251 3354 aa13.95□□□□□ -0.18
CHMP6-202ENST00000571457 E9PSI1 815 aa13.95□□□□□ -0.18
CHMP6-202ENST00000571457 ANP32CO43423 234 aa13.95□□□□□ -0.18
CHMP6-202ENST00000571457 HOXC6P09630 235 aa13.95□□□□□ -0.18
CHMP6-202ENST00000571457 SHHQ15465 462 aa13.95□□□□□ -0.18
CHMP6-202ENST00000571457 WDR78Q5VTH9 848 aa13.95□□□□□ -0.18
CHMP6-202ENST00000571457 EMILIN3Q9NT22 766 aa13.95□□□□□ -0.18
CHMP6-202ENST00000571457 SMC4Q9NTJ3 1288 aa13.95□□□□□ -0.18
CHMP6-202ENST00000571457 ATP11BQ9Y2G3 1177 aa13.95□□□□□ -0.18
CHMP6-202ENST00000571457 FRMPD3Q5JV73 1810 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 USP17L15C9J2P7 530 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 USP17L13C9JLJ4 530 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 KBTBD13C9JR72 458 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 USP17L11C9JVI0 530 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 USP17L18D6R9N7 530 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 USP17L22D6RA61 530 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 USP17L17D6RBQ6 530 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 USP17L19D6RCP7 530 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 USP17L20D6RJB6 530 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 GDF11O95390 407 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 UQCRFS1P1P0C7P4 283 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 FOSL2P15408 326 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 PTPREP23469 700 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 ARID4AP29374 1257 aaPredicted RBP13.94□□□□□ -0.18
CHMP6-202ENST00000571457 USP17L24Q0WX57 530 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 PI16Q6UXB8 463 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 FAM9BQ8IZU0 186 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 FLRT1Q9NZU1 646 aa13.94□□□□□ -0.18
CHMP6-202ENST00000571457 TMEM265A0A087WTH1 108 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 SRGAP3O43295 1099 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 HLA-DOAP06340 250 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 USP14P54578 494 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 PPP4CP60510 307 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 JAG1P78504 1218 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 NAA16Q6N069 864 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms