RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 TMEM67Q5HYA8 995 aa22.72■■□□□ 1.23
SPNS2-203ENST00000570979 CST9Q5W186 159 aa22.72■■□□□ 1.23
SPNS2-203ENST00000570979 CCDC39Q9UFE4 941 aa22.72■■□□□ 1.23
SPNS2-203ENST00000570979 ANAPC4Q9UJX5 808 aa22.72■■□□□ 1.23
SPNS2-203ENST00000570979 PSME4Q14997 1843 aa22.72■■□□□ 1.23
SPNS2-203ENST00000570979 TRPM7Q96QT4 1865 aa22.72■■□□□ 1.23
SPNS2-203ENST00000570979 RPS12P25398 132 aaKnown RBP22.71■■□□□ 1.23
SPNS2-203ENST00000570979 IGDCC4Q8TDY8 1250 aa22.71■■□□□ 1.23
SPNS2-203ENST00000570979 FAM84BQ96KN1 310 aaPredicted RBP22.71■■□□□ 1.23
SPNS2-203ENST00000570979 NBPF3Q9H094 633 aa22.71■■□□□ 1.23
SPNS2-203ENST00000570979 TNMDQ9H2S6 317 aa22.71■■□□□ 1.23
SPNS2-203ENST00000570979 B4E1Z4 1266 aa22.71■■□□□ 1.23
SPNS2-203ENST00000570979 IFIT3O14879 490 aaKnown RBP22.71■■□□□ 1.23
SPNS2-203ENST00000570979 HIBADHP31937 336 aaKnown RBP22.71■■□□□ 1.23
SPNS2-203ENST00000570979 VEGFBP49765 207 aa22.71■■□□□ 1.23
SPNS2-203ENST00000570979 APOA5Q6Q788 366 aa22.71■■□□□ 1.23
SPNS2-203ENST00000570979 ABCF2Q9UG63 623 aa22.71■■□□□ 1.23
SPNS2-203ENST00000570979 SLC12A7Q9Y666 1083 aa22.71■■□□□ 1.23
SPNS2-203ENST00000570979 SNAP23O00161 211 aa22.7■■□□□ 1.22
SPNS2-203ENST00000570979 FDPSP14324 419 aaKnown RBP22.7■■□□□ 1.22
SPNS2-203ENST00000570979 RBM26Q5T8P6 1007 aaKnown RBP22.7■■□□□ 1.22
SPNS2-203ENST00000570979 DLK2Q6UY11 383 aa22.7■■□□□ 1.22
SPNS2-203ENST00000570979 ZSCAN30Q86W11 494 aa22.7■■□□□ 1.22
SPNS2-203ENST00000570979 ZC3H15Q8WU90 426 aaKnown RBP22.7■■□□□ 1.22
SPNS2-203ENST00000570979 PDCL3Q9H2J4 239 aa22.7■■□□□ 1.22
SPNS2-203ENST00000570979 CLSTN2Q9H4D0 955 aa22.7■■□□□ 1.22
SPNS2-203ENST00000570979 RTEL1Q9NZ71 1219 aa22.7■■□□□ 1.22
SPNS2-203ENST00000570979 POLR2AP24928 1970 aaKnown RBP22.69■■□□□ 1.22
SPNS2-203ENST00000570979 NID2Q14112 1375 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 A0A1B0GUL6 1792 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 STK36Q9NRP7 1315 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 HSPA1AP0DMV8 641 aaKnown RBP22.69■■□□□ 1.22
SPNS2-203ENST00000570979 HSPA1BP0DMV9 641 aaKnown RBP22.69■■□□□ 1.22
SPNS2-203ENST00000570979 GYG1P46976 350 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 TRIM29Q14134 588 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 FAM173BQ6P4H8 233 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 CCDC73Q6ZRK6 1079 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 CYB5R4Q7L1T6 521 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 KCNG4Q8TDN1 519 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 EPB41L4AQ9HCS5 686 aaPredicted RBP22.69■■□□□ 1.22
SPNS2-203ENST00000570979 LEMD3Q9Y2U8 911 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 MYH15Q9Y2K3 1946 aa22.69■■□□□ 1.22
SPNS2-203ENST00000570979 YEATS4O95619 227 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 MSNP26038 577 aaKnown RBP22.68■■□□□ 1.22
SPNS2-203ENST00000570979 RSBN1LQ6PCB5 846 aaPredicted RBP22.68■■□□□ 1.22
SPNS2-203ENST00000570979 LCORLQ8N3X6 602 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 ESR2Q92731 530 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 GMLQ99445 158 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 FUCA2Q9BTY2 467 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 ZNF646O15015 1829 aaPredicted RBP22.68■■□□□ 1.22
SPNS2-203ENST00000570979 RASSF10A6NK89 507 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 ADD1P35611 737 aaKnown RBP22.68■■□□□ 1.22
SPNS2-203ENST00000570979 RBM43Q6ZSC3 357 aaKnown RBP22.68■■□□□ 1.22
SPNS2-203ENST00000570979 PODNQ7Z5L7 613 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 RNF214Q8ND24 703 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 MXD3Q9BW11 206 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 LY9Q9HBG7 655 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 DACT1Q9NYF0 836 aa22.68■■□□□ 1.22
SPNS2-203ENST00000570979 ABT1Q9ULW3 272 aaKnown RBP22.68■■□□□ 1.22
SPNS2-203ENST00000570979 PPARAQ07869 468 aa22.67■■□□□ 1.22
SPNS2-203ENST00000570979 POLR3EQ9NVU0 708 aa22.67■■□□□ 1.22
SPNS2-203ENST00000570979 ZSWIM5Q9P217 1185 aa22.67■■□□□ 1.22
SPNS2-203ENST00000570979 ASTN2O75129 1339 aaPredicted RBP22.66■■□□□ 1.22
SPNS2-203ENST00000570979 USP17L3A6NCW0 530 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 USP17L4A6NCW7 530 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 GOLGA8AA7E2F4 631 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 KDM4AO75164 1064 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 SLC3A2P08195 630 aaKnown RBP22.66■■□□□ 1.22
SPNS2-203ENST00000570979 WTAPQ15007 396 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 DEFB115Q30KQ5 88 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 SASS6Q6UVJ0 657 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 USP17L1Q7RTZ2 530 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 CERS3Q8IU89 383 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 TRIM22Q8IYM9 498 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 NEDD4P46934 1319 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 A0A1W2PQ27 194 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 A0A1W2PQ64 194 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 A0A1W2PQD8 194 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 TERF1P54274 439 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 KIF4BQ2VIQ3 1234 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 AGBL3Q8NEM8 1001 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 UBAC1Q9BSL1 405 aa22.66■■□□□ 1.22
SPNS2-203ENST00000570979 GPHNQ9NQX3 736 aaPredicted RBP22.66■■□□□ 1.22
SPNS2-203ENST00000570979 IRS2Q9Y4H2 1338 aa22.65■■□□□ 1.22
SPNS2-203ENST00000570979 CELF2O95319 508 aaKnown RBP22.65■■□□□ 1.22
SPNS2-203ENST00000570979 LIG1P18858 919 aa22.65■■□□□ 1.22
SPNS2-203ENST00000570979 ZNF280AP59817 542 aaPredicted RBP22.65■■□□□ 1.22
SPNS2-203ENST00000570979 SSRP1Q08945 709 aaKnown RBP22.65■■□□□ 1.22
SPNS2-203ENST00000570979 SF3A1Q15459 793 aaKnown RBP22.65■■□□□ 1.22
SPNS2-203ENST00000570979 PGBD1Q96JS3 809 aa22.65■■□□□ 1.22
SPNS2-203ENST00000570979 CRNKL1Q9BZJ0 848 aaKnown RBP22.65■■□□□ 1.22
SPNS2-203ENST00000570979 DTNBO60941 627 aa22.64■■□□□ 1.22
SPNS2-203ENST00000570979 ADALQ6DHV7 355 aa22.64■■□□□ 1.22
SPNS2-203ENST00000570979 ALG1Q9BT22 464 aa22.64■■□□□ 1.22
SPNS2-203ENST00000570979 COA1Q9GZY4 146 aa22.64■■□□□ 1.22
SPNS2-203ENST00000570979 TOMM22Q9NS69 142 aa22.64■■□□□ 1.22
SPNS2-203ENST00000570979 ATP8A2Q9NTI2 1148 aa22.64■■□□□ 1.22
SPNS2-203ENST00000570979 IFNAR1P17181 557 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 CTDSPL2Q05D32 466 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 DACT2Q5SW24 774 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms