RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 EOMESO95936 686 aa6.82□□□□□ -1.32
NUP88-202ENST00000570937 CST3P01034 146 aaPredicted RBP6.82□□□□□ -1.32
NUP88-202ENST00000570937 PGRP06401 933 aa6.82□□□□□ -1.32
NUP88-202ENST00000570937 EIF4A3P38919 411 aaKnown RBP6.82□□□□□ -1.32
NUP88-202ENST00000570937 FBXL19Q6PCT2 694 aa6.82□□□□□ -1.32
NUP88-202ENST00000570937 HEXIM2Q96MH2 286 aaKnown RBP6.82□□□□□ -1.32
NUP88-202ENST00000570937 TJP2Q9UDY2 1190 aa6.82□□□□□ -1.32
NUP88-202ENST00000570937 CCDC39Q9UFE4 941 aa6.82□□□□□ -1.32
NUP88-202ENST00000570937 GTF2IRD1Q9UHL9 959 aa6.82□□□□□ -1.32
NUP88-202ENST00000570937 CCDC9Q9Y3X0 531 aaKnown RBP6.82□□□□□ -1.32
NUP88-202ENST00000570937 CC2D2AQ9P2K1 1620 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 SLITRK5O94991 958 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 RECKO95980 971 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 WNT11O96014 354 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 ZNF76P36508 570 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 OXCT1P55809 520 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 FANCCQ00597 558 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 FAM160A1Q05DH4 1040 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 TMEM201Q5SNT2 666 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 SLC6A19Q695T7 634 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 VSIG10LQ86VR7 867 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 MCATQ8IVS2 390 aaKnown RBP6.81□□□□□ -1.32
NUP88-202ENST00000570937 SUPT16HQ9Y5B9 1047 aaKnown RBP6.81□□□□□ -1.32
NUP88-202ENST00000570937 U3KQE9 123 aa6.81□□□□□ -1.32
NUP88-202ENST00000570937 CECR2Q9BXF3 1484 aa6.8□□□□□ -1.32
NUP88-202ENST00000570937 PRAMEF13Q5VWM6 474 aa6.8□□□□□ -1.32
NUP88-202ENST00000570937 NFXL1Q6ZNB6 911 aa6.8□□□□□ -1.32
NUP88-202ENST00000570937 REC114Q7Z4M0 266 aa6.8□□□□□ -1.32
NUP88-202ENST00000570937 NETO1Q8TDF5 533 aa6.8□□□□□ -1.32
NUP88-202ENST00000570937 ZNF296Q8WUU4 475 aaPredicted RBP6.8□□□□□ -1.32
NUP88-202ENST00000570937 ACSF2Q96CM8 615 aaPredicted RBP6.8□□□□□ -1.32
NUP88-202ENST00000570937 TMEM87BQ96K49 555 aa6.8□□□□□ -1.32
NUP88-202ENST00000570937 ADAMTS1Q9UHI8 967 aa6.8□□□□□ -1.32
NUP88-202ENST00000570937 MAPK8IP1Q9UQF2 711 aa6.8□□□□□ -1.32
NUP88-202ENST00000570937 CORINQ9Y5Q5 1042 aa6.8□□□□□ -1.32
NUP88-202ENST00000570937 CEACAM5P06731 702 aa6.79□□□□□ -1.32
NUP88-202ENST00000570937 C22orf34Q6ZV56 151 aa6.79□□□□□ -1.32
NUP88-202ENST00000570937 PLD6Q8N2A8 252 aaKnown RBP6.79□□□□□ -1.32
NUP88-202ENST00000570937 FAM181AQ8N9Y4 354 aa6.79□□□□□ -1.32
NUP88-202ENST00000570937 MISP3Q96FF7 219 aa6.79□□□□□ -1.32
NUP88-202ENST00000570937 TNKS2Q9H2K2 1166 aa6.79□□□□□ -1.32
NUP88-202ENST00000570937 POLR3KQ9Y2Y1 108 aaPredicted RBP6.79□□□□□ -1.32
NUP88-202ENST00000570937 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
NUP88-202ENST00000570937 SCAMP3O14828 347 aaKnown RBP6.78□□□□□ -1.32
NUP88-202ENST00000570937 PLCG1P19174 1290 aa6.78□□□□□ -1.32
NUP88-202ENST00000570937 GP2P55259 537 aaKnown RBP6.78□□□□□ -1.32
NUP88-202ENST00000570937 IFI16Q16666 785 aaKnown RBP6.78□□□□□ -1.32
NUP88-202ENST00000570937 LETMD1Q6P1Q0 360 aa6.78□□□□□ -1.32
NUP88-202ENST00000570937 STK11IPQ8N1F8 1099 aa6.78□□□□□ -1.32
NUP88-202ENST00000570937 FBXO27Q8NI29 283 aa6.78□□□□□ -1.32
NUP88-202ENST00000570937 MRRFQ96E11 262 aaKnown RBP6.78□□□□□ -1.32
NUP88-202ENST00000570937 MIPEPQ99797 713 aa6.78□□□□□ -1.32
NUP88-202ENST00000570937 PRDM5Q9NQX1 630 aaPredicted RBP6.78□□□□□ -1.32
NUP88-202ENST00000570937 ANGEL1Q9UNK9 670 aaKnown RBP6.78□□□□□ -1.32
NUP88-202ENST00000570937 PLAGL2Q9UPG8 496 aa6.78□□□□□ -1.32
NUP88-202ENST00000570937 BTBD11A6QL63 1104 aa6.77□□□□□ -1.33
NUP88-202ENST00000570937 CWF19L2Q2TBE0 894 aaKnown RBP6.77□□□□□ -1.33
NUP88-202ENST00000570937 ZNF746Q6NUN9 644 aaPredicted RBP6.77□□□□□ -1.33
NUP88-202ENST00000570937 SLFN12Q8IYM2 578 aa6.77□□□□□ -1.33
NUP88-202ENST00000570937 BCL7CQ8WUZ0 217 aaPredicted RBP6.77□□□□□ -1.33
NUP88-202ENST00000570937 RNF34Q969K3 372 aa6.77□□□□□ -1.33
NUP88-202ENST00000570937 COX4I2Q96KJ9 171 aa6.77□□□□□ -1.33
NUP88-202ENST00000570937 FBXL18Q96ME1 805 aa6.77□□□□□ -1.33
NUP88-202ENST00000570937 NT5C1AQ9BXI3 368 aa6.77□□□□□ -1.33
NUP88-202ENST00000570937 KIAA1522Q9P206 1035 aaPredicted RBP6.77□□□□□ -1.33
NUP88-202ENST00000570937 VAV3Q9UKW4 847 aa6.77□□□□□ -1.33
NUP88-202ENST00000570937 SNX11Q9Y5W9 270 aa6.77□□□□□ -1.33
NUP88-202ENST00000570937 TMEM265A0A087WTH1 108 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 UNCXA6NJT0 531 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 ATE1O95260 518 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 HTR3BO95264 441 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 ZNF865P0CJ78 1059 aaPredicted RBP6.76□□□□□ -1.33
NUP88-202ENST00000570937 CRKP46108 304 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 YARSP54577 528 aaKnown RBP6.76□□□□□ -1.33
NUP88-202ENST00000570937 PRKCQQ04759 706 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 ARHGAP27Q6ZUM4 889 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 USP48Q86UV5 1035 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 WFDC3Q8IUB2 231 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 RIN3Q8TB24 985 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 REV1Q9UBZ9 1251 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 CNTNAP4Q9C0A0 1308 aa6.76□□□□□ -1.33
NUP88-202ENST00000570937 TLR3O15455 904 aaKnown RBP6.75□□□□□ -1.33
NUP88-202ENST00000570937 GRIN3BO60391 1043 aa6.75□□□□□ -1.33
NUP88-202ENST00000570937 NKPD1Q17RQ9 610 aa6.75□□□□□ -1.33
NUP88-202ENST00000570937 SFRP5Q5T4F7 317 aa6.75□□□□□ -1.33
NUP88-202ENST00000570937 KIAA0825Q8IV33 1275 aa6.75□□□□□ -1.33
NUP88-202ENST00000570937 SPACA3Q8IXA5 215 aa6.75□□□□□ -1.33
NUP88-202ENST00000570937 REXO1Q8N1G1 1221 aaKnown RBP6.75□□□□□ -1.33
NUP88-202ENST00000570937 FAM13CQ8NE31 585 aa6.75□□□□□ -1.33
NUP88-202ENST00000570937 DNAJB8Q8NHS0 232 aa6.75□□□□□ -1.33
NUP88-202ENST00000570937 DPH2Q9BQC3 489 aaPredicted RBP6.75□□□□□ -1.33
NUP88-202ENST00000570937 BRMS1Q9HCU9 246 aa6.75□□□□□ -1.33
NUP88-202ENST00000570937 PAK6Q9NQU5 681 aaPredicted RBP6.75□□□□□ -1.33
NUP88-202ENST00000570937 TPX2Q9ULW0 747 aaKnown RBP6.75□□□□□ -1.33
NUP88-202ENST00000570937 SLC5A6Q9Y289 635 aa6.75□□□□□ -1.33
NUP88-202ENST00000570937 OAS3Q9Y6K5 1087 aaKnown RBP6.75□□□□□ -1.33
NUP88-202ENST00000570937 GNAT3A8MTJ3 354 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 UPK3BL1B0FP48 263 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 UPK3BL2E5RIL1 263 aa6.74□□□□□ -1.33
NUP88-202ENST00000570937 CLCN7P51798 805 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms