RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 MAST2Q6P0Q8 1798 aa23.3■■□□□ 1.32
SCARF1-204ENST00000570902 USP17L10C9JJH3 530 aa23.3■■□□□ 1.32
SCARF1-204ENST00000570902 IGSF3O75054 1194 aa23.3■■□□□ 1.32
SCARF1-204ENST00000570902 PRKAR2AP13861 404 aaKnown RBP23.3■■□□□ 1.32
SCARF1-204ENST00000570902 MAPK4P31152 587 aa23.3■■□□□ 1.32
SCARF1-204ENST00000570902 MNX1P50219 401 aaPredicted RBP23.3■■□□□ 1.32
SCARF1-204ENST00000570902 PPP4CP60510 307 aa23.3■■□□□ 1.32
SCARF1-204ENST00000570902 GTF3C2Q8WUA4 911 aaPredicted RBP23.3■■□□□ 1.32
SCARF1-204ENST00000570902 TGFBRAP1Q8WUH2 860 aa23.3■■□□□ 1.32
SCARF1-204ENST00000570902 DDX60LQ5H9U9 1706 aaKnown RBP23.3■■□□□ 1.32
SCARF1-204ENST00000570902 FLT1P17948 1338 aa23.3■■□□□ 1.32
SCARF1-204ENST00000570902 PLXNB2O15031 1838 aa23.29■■□□□ 1.32
SCARF1-204ENST00000570902 PNMA6EA0A0J9YXQ4 647 aa23.29■■□□□ 1.32
SCARF1-204ENST00000570902 CCDC158Q5M9N0 1113 aa23.29■■□□□ 1.32
SCARF1-204ENST00000570902 TTC39AQ5SRH9 613 aa23.29■■□□□ 1.32
SCARF1-204ENST00000570902 MAPKAPK5Q8IW41 473 aa23.29■■□□□ 1.32
SCARF1-204ENST00000570902 CCAR1Q8IX12 1150 aaKnown RBP23.29■■□□□ 1.32
SCARF1-204ENST00000570902 GPR108Q9NPR9 543 aa23.29■■□□□ 1.32
SCARF1-204ENST00000570902 SIPA1L1O43166 1804 aa23.29■■□□□ 1.32
SCARF1-204ENST00000570902 DLL1O00548 723 aa23.28■■□□□ 1.32
SCARF1-204ENST00000570902 ZKSCAN1P17029 563 aaPredicted RBP23.28■■□□□ 1.32
SCARF1-204ENST00000570902 ATF7IPQ6VMQ6 1270 aa23.28■■□□□ 1.32
SCARF1-204ENST00000570902 DNAJC18Q9H819 358 aa23.28■■□□□ 1.32
SCARF1-204ENST00000570902 TXNRD2Q9NNW7 524 aa23.28■■□□□ 1.32
SCARF1-204ENST00000570902 SNRKQ9NRH2 765 aa23.28■■□□□ 1.32
SCARF1-204ENST00000570902 HLA-DOAP06340 250 aa23.27■■□□□ 1.32
SCARF1-204ENST00000570902 TRIM27P14373 513 aa23.27■■□□□ 1.32
SCARF1-204ENST00000570902 ZBTB21Q9ULJ3 1066 aa23.27■■□□□ 1.32
SCARF1-204ENST00000570902 SYN1P17600 705 aa23.26■■□□□ 1.31
SCARF1-204ENST00000570902 RGS2P41220 211 aa23.26■■□□□ 1.31
SCARF1-204ENST00000570902 ERVK-9P63128 1117 aa23.26■■□□□ 1.31
SCARF1-204ENST00000570902 ERVK-24P63145 666 aa23.26■■□□□ 1.31
SCARF1-204ENST00000570902 JAG1P78504 1218 aa23.26■■□□□ 1.31
SCARF1-204ENST00000570902 LRIT3Q3SXY7 679 aa23.26■■□□□ 1.31
SCARF1-204ENST00000570902 TNNI3KQ59H18 835 aa23.26■■□□□ 1.31
SCARF1-204ENST00000570902 RBPJLQ9UBG7 517 aa23.26■■□□□ 1.31
SCARF1-204ENST00000570902 PALD1Q9ULE6 856 aa23.26■■□□□ 1.31
SCARF1-204ENST00000570902 FPGT-TNNI3KV9GXZ4 949 aa23.26■■□□□ 1.31
SCARF1-204ENST00000570902 GDF11O95390 407 aa23.25■■□□□ 1.31
SCARF1-204ENST00000570902 MAGEA10P43363 369 aaPredicted RBP23.25■■□□□ 1.31
SCARF1-204ENST00000570902 USP17L2Q6R6M4 530 aa23.25■■□□□ 1.31
SCARF1-204ENST00000570902 ADGRA1Q86SQ6 560 aa23.25■■□□□ 1.31
SCARF1-204ENST00000570902 TDHQ8IZJ6 230 aa23.25■■□□□ 1.31
SCARF1-204ENST00000570902 ZNF512BQ96KM6 892 aaPredicted RBP23.25■■□□□ 1.31
SCARF1-204ENST00000570902 COL6A3P12111 3177 aa23.25■■□□□ 1.31
SCARF1-204ENST00000570902 FOCADQ5VW36 1801 aa23.24■■□□□ 1.31
SCARF1-204ENST00000570902 CYP2E1P05181 493 aaPredicted RBP23.24■■□□□ 1.31
SCARF1-204ENST00000570902 CACNB2Q08289 660 aaPredicted RBP23.24■■□□□ 1.31
SCARF1-204ENST00000570902 OS9Q13438 667 aaPredicted RBP23.24■■□□□ 1.31
SCARF1-204ENST00000570902 GPR142Q7Z601 462 aa23.24■■□□□ 1.31
SCARF1-204ENST00000570902 PLEKHH3Q7Z736 793 aa23.24■■□□□ 1.31
SCARF1-204ENST00000570902 USP6NLQ92738 828 aa23.24■■□□□ 1.31
SCARF1-204ENST00000570902 FRAT1Q92837 279 aaPredicted RBP23.24■■□□□ 1.31
SCARF1-204ENST00000570902 APBA2Q99767 749 aa23.24■■□□□ 1.31
SCARF1-204ENST00000570902 DBNDD2Q9BQY9 259 aa23.24■■□□□ 1.31
SCARF1-204ENST00000570902 CWC22Q9HCG8 908 aaKnown RBP23.24■■□□□ 1.31
SCARF1-204ENST00000570902 PFASO15067 1338 aa23.24■■□□□ 1.31
SCARF1-204ENST00000570902 PEX10O60683 326 aa23.23■■□□□ 1.31
SCARF1-204ENST00000570902 Q3C1V9 767 aa23.23■■□□□ 1.31
SCARF1-204ENST00000570902 MORN1Q5T089 497 aa23.23■■□□□ 1.31
SCARF1-204ENST00000570902 CERS3Q8IU89 383 aa23.23■■□□□ 1.31
SCARF1-204ENST00000570902 DEFB123Q8N688 67 aa23.23■■□□□ 1.31
SCARF1-204ENST00000570902 PAGR1Q9BTK6 254 aa23.23■■□□□ 1.31
SCARF1-204ENST00000570902 UBE2OQ9C0C9 1292 aaKnown RBP23.23■■□□□ 1.31
SCARF1-204ENST00000570902 CDK5RAP2Q96SN8 1893 aa23.23■■□□□ 1.31
SCARF1-204ENST00000570902 COL6A1P12109 1028 aa23.22■■□□□ 1.31
SCARF1-204ENST00000570902 SHROOM1Q2M3G4 852 aaPredicted RBP23.22■■□□□ 1.31
SCARF1-204ENST00000570902 PORCNQ9H237 461 aa23.22■■□□□ 1.31
SCARF1-204ENST00000570902 EMILIN3Q9NT22 766 aa23.22■■□□□ 1.31
SCARF1-204ENST00000570902 SAP30BPQ9UHR5 308 aaKnown RBP23.22■■□□□ 1.31
SCARF1-204ENST00000570902 GLRX3O76003 335 aaKnown RBP23.21■■□□□ 1.31
SCARF1-204ENST00000570902 CCNA1P78396 465 aa23.21■■□□□ 1.31
SCARF1-204ENST00000570902 POLA2Q14181 598 aa23.21■■□□□ 1.31
SCARF1-204ENST00000570902 CLUAP1Q96AJ1 413 aa23.21■■□□□ 1.31
SCARF1-204ENST00000570902 RABGAP1Q9Y3P9 1069 aa23.21■■□□□ 1.31
SCARF1-204ENST00000570902 GH2P01242 217 aa23.2■■□□□ 1.3
SCARF1-204ENST00000570902 CCND3P30281 292 aaPredicted RBP23.2■■□□□ 1.3
SCARF1-204ENST00000570902 ZAP70P43403 619 aa23.2■■□□□ 1.3
SCARF1-204ENST00000570902 LHX8Q68G74 356 aa23.2■■□□□ 1.3
SCARF1-204ENST00000570902 SSH3Q8TE77 659 aa23.2■■□□□ 1.3
SCARF1-204ENST00000570902 C12orf42Q96LP6 360 aa23.2■■□□□ 1.3
SCARF1-204ENST00000570902 FEZ1Q99689 392 aa23.2■■□□□ 1.3
SCARF1-204ENST00000570902 USP17L15C9J2P7 530 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 USP17L13C9JLJ4 530 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 USP17L11C9JVI0 530 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 USP17L18D6R9N7 530 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 USP17L22D6RA61 530 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 USP17L17D6RBQ6 530 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 USP17L19D6RCP7 530 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 USP17L20D6RJB6 530 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 BCAR3O75815 825 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 CYP7A1P22680 504 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 USP14P54578 494 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 USP17L24Q0WX57 530 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 MAP2K5Q13163 448 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 CCL14Q16627 93 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 PIH1D3Q9NQM4 214 aaKnown RBP23.19■■□□□ 1.3
SCARF1-204ENST00000570902 TNNQ9UQP3 1299 aa23.19■■□□□ 1.3
SCARF1-204ENST00000570902 SURF6O75683 361 aaKnown RBP23.18■■□□□ 1.3
SCARF1-204ENST00000570902 USP5P45974 858 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms