RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 MAP3K12Q12852 859 aa15.06■□□□□ 0
CTDNEP1-205ENST00000570828 GADL1Q6ZQY3 521 aa15.06■□□□□ 0
CTDNEP1-205ENST00000570828 CERS3Q8IU89 383 aa15.06■□□□□ 0
CTDNEP1-205ENST00000570828 MAPKAPK5Q8IW41 473 aa15.06■□□□□ 0
CTDNEP1-205ENST00000570828 TRIM34Q9BYJ4 488 aa15.06■□□□□ 0
CTDNEP1-205ENST00000570828 PI4KBQ9UBF8 816 aa15.06■□□□□ 0
CTDNEP1-205ENST00000570828 CPA4Q9UI42 421 aa15.06■□□□□ 0
CTDNEP1-205ENST00000570828 AFG3L2Q9Y4W6 797 aa15.06■□□□□ 0
CTDNEP1-205ENST00000570828 NDUFB9Q9Y6M9 179 aa15.06■□□□□ 0
CTDNEP1-205ENST00000570828 IFIT2P09913 472 aaKnown RBP15.05■□□□□ -0
CTDNEP1-205ENST00000570828 PDE3AQ14432 1141 aa15.05■□□□□ -0
CTDNEP1-205ENST00000570828 TMED8Q6PL24 325 aaPredicted RBP15.05■□□□□ -0
CTDNEP1-205ENST00000570828 SIRT2Q8IXJ6 389 aa15.05■□□□□ -0
CTDNEP1-205ENST00000570828 MAGEB6Q8N7X4 407 aa15.05■□□□□ -0
CTDNEP1-205ENST00000570828 BCL11AQ9H165 835 aa15.05■□□□□ -0
CTDNEP1-205ENST00000570828 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.05■□□□□ -0
CTDNEP1-205ENST00000570828 CENPFP49454 3210 aa15.05■□□□□ -0
CTDNEP1-205ENST00000570828 ADGRA2Q96PE1 1338 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 RAB11FIP3O75154 756 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 GNRH1P01148 92 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 CYP2C8P10632 490 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 TTF1Q15361 905 aaPredicted RBP15.04■□□□□ -0
CTDNEP1-205ENST00000570828 SLC9C1Q4G0N8 1177 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 GPAT2Q6NUI2 795 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 C17orf99Q6UX52 265 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 CCDC84Q86UT8 332 aaPredicted RBP15.04■□□□□ -0
CTDNEP1-205ENST00000570828 CRACR2BQ8N4Y2 399 aaPredicted RBP15.04■□□□□ -0
CTDNEP1-205ENST00000570828 MIGA1Q8NAN2 632 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 ARMC5Q96C12 935 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 TBC1D2Q9BYX2 928 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 ARHGAP39Q9C0H5 1083 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 ANTXR1Q9H6X2 564 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 PTCH2Q9Y6C5 1203 aa15.04■□□□□ -0
CTDNEP1-205ENST00000570828 HLA-DOAP06340 250 aa15.03■□□□□ -0
CTDNEP1-205ENST00000570828 CAP2P40123 477 aa15.03■□□□□ -0
CTDNEP1-205ENST00000570828 DYNLL1P63167 89 aaKnown RBP15.03■□□□□ -0
CTDNEP1-205ENST00000570828 PDAP1Q13442 181 aaKnown RBP15.03■□□□□ -0
CTDNEP1-205ENST00000570828 C20orf194Q5TEA3 1177 aa15.03■□□□□ -0
CTDNEP1-205ENST00000570828 SAP30BPQ9UHR5 308 aaKnown RBP15.03■□□□□ -0
CTDNEP1-205ENST00000570828 SLC45A1Q9Y2W3 748 aa15.03■□□□□ -0
CTDNEP1-205ENST00000570828 DOCK1Q14185 1865 aa15.03■□□□□ -0
CTDNEP1-205ENST00000570828 TNRC18O15417 2968 aaPredicted RBP15.02■□□□□ -0
CTDNEP1-205ENST00000570828 ECM2O94769 699 aaPredicted RBP15.02■□□□□ -0
CTDNEP1-205ENST00000570828 PSMC4P43686 418 aa15.02■□□□□ -0
CTDNEP1-205ENST00000570828 USP5P45974 858 aa15.02■□□□□ -0
CTDNEP1-205ENST00000570828 PRMT2P55345 433 aa15.02■□□□□ -0
CTDNEP1-205ENST00000570828 SPP2Q13103 211 aa15.02■□□□□ -0
CTDNEP1-205ENST00000570828 NBPF11Q86T75 865 aa15.02■□□□□ -0
CTDNEP1-205ENST00000570828 ZNF280CQ8ND82 737 aa15.02■□□□□ -0
CTDNEP1-205ENST00000570828 SMCR8Q8TEV9 937 aaPredicted RBP15.02■□□□□ -0
CTDNEP1-205ENST00000570828 DNAJC2Q99543 621 aaKnown RBP15.02■□□□□ -0
CTDNEP1-205ENST00000570828 AS3MTQ9HBK9 375 aa15.02■□□□□ -0
CTDNEP1-205ENST00000570828 PALD1Q9ULE6 856 aa15.02■□□□□ -0
CTDNEP1-205ENST00000570828 AGTPBP1Q9UPW5 1226 aa15.02■□□□□ -0
CTDNEP1-205ENST00000570828 USP17L5A8MUK1 530 aa15.01□□□□□ -0.01
CTDNEP1-205ENST00000570828 FMNL1O95466 1100 aaPredicted RBP15.01□□□□□ -0.01
CTDNEP1-205ENST00000570828 HOXD10P28358 340 aa15.01□□□□□ -0.01
CTDNEP1-205ENST00000570828 SLC4A8Q2Y0W8 1093 aa15.01□□□□□ -0.01
CTDNEP1-205ENST00000570828 FOXP4Q8IVH2 680 aaPredicted RBP15.01□□□□□ -0.01
CTDNEP1-205ENST00000570828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.01□□□□□ -0.01
CTDNEP1-205ENST00000570828 ZNF333Q96JL9 665 aa15.01□□□□□ -0.01
CTDNEP1-205ENST00000570828 PNMA3Q9UL41 463 aa15.01□□□□□ -0.01
CTDNEP1-205ENST00000570828 GOLIM4O00461 696 aa15□□□□□ -0.01
CTDNEP1-205ENST00000570828 ASNSP08243 561 aa15□□□□□ -0.01
CTDNEP1-205ENST00000570828 BCRP11274 1271 aa15□□□□□ -0.01
CTDNEP1-205ENST00000570828 FCGRTP55899 365 aa15□□□□□ -0.01
CTDNEP1-205ENST00000570828 RRP1BQ14684 758 aaKnown RBP15□□□□□ -0.01
CTDNEP1-205ENST00000570828 METTL16Q86W50 562 aaKnown RBP15□□□□□ -0.01
CTDNEP1-205ENST00000570828 PROCA1Q8NCQ7 364 aaPredicted RBP15□□□□□ -0.01
CTDNEP1-205ENST00000570828 SPOCK2Q92563 424 aa15□□□□□ -0.01
CTDNEP1-205ENST00000570828 TRIM47Q96LD4 638 aa15□□□□□ -0.01
CTDNEP1-205ENST00000570828 DNAJC18Q9H819 358 aa15□□□□□ -0.01
CTDNEP1-205ENST00000570828 PDE6AP16499 860 aa14.99□□□□□ -0.01
CTDNEP1-205ENST00000570828 HMGCS2P54868 508 aa14.99□□□□□ -0.01
CTDNEP1-205ENST00000570828 PABPC4Q13310 644 aaKnown RBP eCLIP14.99□□□□□ -0.016e-11■□□□□ 10.8
CTDNEP1-205ENST00000570828 TREML2Q5T2D2 321 aa14.99□□□□□ -0.01
CTDNEP1-205ENST00000570828 SLC9C2Q5TAH2 1124 aa14.99□□□□□ -0.01
CTDNEP1-205ENST00000570828 LRRCC1Q9C099 1032 aa14.99□□□□□ -0.01
CTDNEP1-205ENST00000570828 SRRDQ9UH36 339 aa14.99□□□□□ -0.01
CTDNEP1-205ENST00000570828 BOLA1Q9Y3E2 137 aa14.99□□□□□ -0.01
CTDNEP1-205ENST00000570828 MYPNQ86TC9 1320 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 MAGEB6P1A0A0J9YX57 407 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 GDF11O95390 407 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 OSBPP22059 807 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 CTGFP29279 349 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 MTMR2Q13614 643 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 TPRNQ4KMQ1 711 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 RAET1EQ8TD07 263 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 SH3TC2Q8TF17 1288 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 RIOK1Q9BRS2 568 aaKnown RBP14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 GINM1Q9NU53 330 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 ZBTB21Q9ULJ3 1066 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 BRCA2P51587 3418 aa14.98□□□□□ -0.01
CTDNEP1-205ENST00000570828 ZNF532Q9HCE3 1301 aa14.97□□□□□ -0.01
CTDNEP1-205ENST00000570828 MYCP01106 439 aaPredicted RBP14.97□□□□□ -0.01
CTDNEP1-205ENST00000570828 TTC6Q86TZ1 520 aa14.97□□□□□ -0.01
CTDNEP1-205ENST00000570828 WDR18Q9BV38 432 aa14.97□□□□□ -0.01
CTDNEP1-205ENST00000570828 CRNKL1Q9BZJ0 848 aaKnown RBP14.97□□□□□ -0.01
CTDNEP1-205ENST00000570828 EHD4Q9H223 541 aa14.97□□□□□ -0.01
CTDNEP1-205ENST00000570828 BOLA2Q9H3K6 86 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms