RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 CDC5LQ99459 802 aaKnown RBP17.48■□□□□ 0.39
SMG6-207ENST00000570756 ADD3Q9UEY8 706 aaKnown RBP17.48■□□□□ 0.39
SMG6-207ENST00000570756 ITIH6Q6UXX5 1313 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 SYNRGQ9UMZ2 1314 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 A0A0U1RQJ8 604 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 SH2B2O14492 632 aaPredicted RBP17.47■□□□□ 0.39
SMG6-207ENST00000570756 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
SMG6-207ENST00000570756 APOA5Q6Q788 366 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 APTXQ7Z2E3 356 aaKnown RBP17.47■□□□□ 0.39
SMG6-207ENST00000570756 TADA2BQ86TJ2 420 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 SPATA20Q8TB22 786 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 ATRIPQ8WXE1 791 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 MED15Q96RN5 788 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 TAOK2Q9UL54 1235 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 ZBTB43O43298 467 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 CIAO1O76071 339 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 CASP14P31944 242 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 PLBD2Q8NHP8 589 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 CABLES1Q8TDN4 633 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 MYCBPQ99417 103 aaPredicted RBP17.47■□□□□ 0.39
SMG6-207ENST00000570756 NCAPGQ9BPX3 1015 aa17.47■□□□□ 0.39
SMG6-207ENST00000570756 FBXO2Q9UK22 296 aaPredicted RBP17.47■□□□□ 0.39
SMG6-207ENST00000570756 WDR17Q8IZU2 1322 aa17.46■□□□□ 0.39
SMG6-207ENST00000570756 STK36Q9NRP7 1315 aa17.46■□□□□ 0.39
SMG6-207ENST00000570756 KIF1AQ12756 1690 aa17.46■□□□□ 0.39
SMG6-207ENST00000570756 RILPL1Q5EBL4 403 aa17.46■□□□□ 0.39
SMG6-207ENST00000570756 MICU3Q86XE3 530 aa17.46■□□□□ 0.39
SMG6-207ENST00000570756 NOA1Q8NC60 698 aaKnown RBP17.46■□□□□ 0.39
SMG6-207ENST00000570756 SMARCC1Q92922 1105 aaPredicted RBP17.46■□□□□ 0.39
SMG6-207ENST00000570756 ECM29Q5VYK3 1845 aa17.46■□□□□ 0.39
SMG6-207ENST00000570756 H7C1W4 665 aa17.46■□□□□ 0.38
SMG6-207ENST00000570756 CYP26C1Q6V0L0 522 aa17.46■□□□□ 0.38
SMG6-207ENST00000570756 MMS22LQ6ZRQ5 1243 aa17.46■□□□□ 0.38
SMG6-207ENST00000570756 ZBTB9Q96C00 473 aa17.46■□□□□ 0.38
SMG6-207ENST00000570756 TMEM87BQ96K49 555 aa17.46■□□□□ 0.38
SMG6-207ENST00000570756 CEP131Q9UPN4 1083 aa17.46■□□□□ 0.38
SMG6-207ENST00000570756 PRPF6O94906 941 aaKnown RBP17.45■□□□□ 0.38
SMG6-207ENST00000570756 SYF2O95926 243 aaKnown RBP17.45■□□□□ 0.38
SMG6-207ENST00000570756 AMPD2Q01433 879 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 CDKAL1Q5VV42 579 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 ACRBPQ8NEB7 543 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
SMG6-207ENST00000570756 DRC1Q96MC2 740 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 UBN2Q6ZU65 1347 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 CAMTA1Q9Y6Y1 1673 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 GOLGA8AA7E2F4 631 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 GPAA1O43292 621 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 ACTN4O43707 911 aaKnown RBP17.45■□□□□ 0.38
SMG6-207ENST00000570756 TOM1O60784 492 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 GYPCP04921 128 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 RXRAP19793 462 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 AKAP17AQ02040 695 aaKnown RBP17.45■□□□□ 0.38
SMG6-207ENST00000570756 SSRP1Q08945 709 aaKnown RBP17.45■□□□□ 0.38
SMG6-207ENST00000570756 NFXL1Q6ZNB6 911 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 TTC5Q8N0Z6 440 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 CEP126Q9P2H0 1117 aa17.45■□□□□ 0.38
SMG6-207ENST00000570756 USP14P54578 494 aa17.44■□□□□ 0.38
SMG6-207ENST00000570756 TRIM14Q14142 442 aa17.44■□□□□ 0.38
SMG6-207ENST00000570756 NTRK3Q16288 839 aa17.44■□□□□ 0.38
SMG6-207ENST00000570756 GRAMD1CQ8IYS0 662 aa17.44■□□□□ 0.38
SMG6-207ENST00000570756 PUS7LQ9H0K6 701 aaKnown RBP17.44■□□□□ 0.38
SMG6-207ENST00000570756 HPCAL4Q9UM19 191 aa17.44■□□□□ 0.38
SMG6-207ENST00000570756 ABCC12Q96J65 1359 aa17.44■□□□□ 0.38
SMG6-207ENST00000570756 KDM6AO15550 1401 aaPredicted RBP17.44■□□□□ 0.38
SMG6-207ENST00000570756 TRPM3Q9HCF6 1732 aaPredicted RBP17.44■□□□□ 0.38
SMG6-207ENST00000570756 LRRC24Q50LG9 513 aa17.43■□□□□ 0.38
SMG6-207ENST00000570756 RPGRIP1Q96KN7 1286 aa17.43■□□□□ 0.38
SMG6-207ENST00000570756 SRPRBQ9Y5M8 271 aaKnown RBP17.43■□□□□ 0.38
SMG6-207ENST00000570756 SCN11AQ9UI33 1791 aa17.43■□□□□ 0.38
SMG6-207ENST00000570756 TARSL2A2RTX5 802 aaKnown RBP17.43■□□□□ 0.38
SMG6-207ENST00000570756 TFRCP02786 760 aaKnown RBP17.43■□□□□ 0.38
SMG6-207ENST00000570756 ARHGAP25P42331 645 aa17.43■□□□□ 0.38
SMG6-207ENST00000570756 FXR1P51114 621 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMG6-207ENST00000570756 STIM1Q13586 685 aa17.43■□□□□ 0.38
SMG6-207ENST00000570756 KLHL10Q6JEL2 608 aa17.43■□□□□ 0.38
SMG6-207ENST00000570756 COG1Q8WTW3 980 aa17.43■□□□□ 0.38
SMG6-207ENST00000570756 CRACR2AQ9BSW2 395 aa17.43■□□□□ 0.38
SMG6-207ENST00000570756 SLC26A6Q9BXS9 759 aa17.43■□□□□ 0.38
SMG6-207ENST00000570756 FOXP1Q9H334 677 aaPredicted RBP17.43■□□□□ 0.38
SMG6-207ENST00000570756 ABHD10Q9NUJ1 306 aa17.43■□□□□ 0.38
SMG6-207ENST00000570756 RANBP6O60518 1105 aaKnown RBP17.42■□□□□ 0.38
SMG6-207ENST00000570756 MMP1P03956 469 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 SWT1Q5T5J6 900 aaKnown RBP17.42■□□□□ 0.38
SMG6-207ENST00000570756 MCTP2Q6DN12 878 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 NCAPH2Q6IBW4 605 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 CYB5R4Q7L1T6 521 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.42■□□□□ 0.38
SMG6-207ENST00000570756 CWC25Q9NXE8 425 aaPredicted RBP17.42■□□□□ 0.38
SMG6-207ENST00000570756 CDHR2Q9BYE9 1310 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 MYH8P13535 1937 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 SHOX2O60902 331 aaPredicted RBP17.42■□□□□ 0.38
SMG6-207ENST00000570756 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
SMG6-207ENST00000570756 TOB1P50616 345 aaPredicted RBP17.42■□□□□ 0.38
SMG6-207ENST00000570756 GRIN1Q05586 938 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 CUL4BQ13620 913 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 SGMS1Q86VZ5 419 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 DIS3L2Q8IYB7 885 aaKnown RBP17.42■□□□□ 0.38
SMG6-207ENST00000570756 MICALL1Q8N3F8 863 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 PLEKHA4Q9H4M7 779 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 TOMM22Q9NS69 142 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms