RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 ERO1BQ86YB8 467 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 FAM43AQ8N2R8 423 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 WDR66Q8TBY9 1149 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 LPIN2Q92539 896 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 ARMC5Q96C12 935 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 SIL1Q9H173 461 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 SUGT1Q9Y2Z0 365 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 SNCAIPQ9Y6H5 919 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 RNF40O75150 1001 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 FGFR2P21802 821 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 PPIL2Q13356 520 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 ATP2B3Q16720 1220 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 ALDH1L2Q3SY69 923 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 FKBP1CQ5VVH2 108 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 APOBEC3HQ6NTF7 200 aaKnown RBP8.08□□□□□ -1.12
SMG6-204ENST00000570606 HHIPL2Q6UWX4 724 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 ZKSCAN4Q969J2 545 aaPredicted RBP8.08□□□□□ -1.12
SMG6-204ENST00000570606 GCC1Q96CN9 775 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 ZNF341Q9BYN7 854 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 USP44Q9H0E7 712 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 GNL3LQ9NVN8 582 aaKnown RBP8.08□□□□□ -1.12
SMG6-204ENST00000570606 DAGLAQ9Y4D2 1042 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 PTCH2Q9Y6C5 1203 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 TRIOBPQ9H2D6 2365 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 DOCK1Q14185 1865 aa8.08□□□□□ -1.12
SMG6-204ENST00000570606 PTPRFP10586 1907 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 MGAMO43451 1857 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 BTBD19C9JJ37 291 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 LDHBP07195 334 aaKnown RBP8.07□□□□□ -1.12
SMG6-204ENST00000570606 RFX5P48382 616 aaPredicted RBP8.07□□□□□ -1.12
SMG6-204ENST00000570606 CAP1Q01518 475 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 SLFN5Q08AF3 891 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 TCP10Q12799 353 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 SLC4A8Q2Y0W8 1093 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 MIGA2Q7L4E1 593 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 NBPF11Q86T75 865 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 FAM151AQ8WW52 585 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 LRCH3Q96II8 777 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 ZNF333Q96JL9 665 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 ARID3AQ99856 593 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 MRIQ9BWK5 157 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 GDPD2Q9HCC8 539 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 ZCCHC17Q9NP64 241 aaKnown RBP8.07□□□□□ -1.12
SMG6-204ENST00000570606 PCDH10Q9P2E7 1040 aa8.07□□□□□ -1.12
SMG6-204ENST00000570606 CFAP99D6REC4 459 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 TLR2O60603 784 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 CIAO1O76071 339 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 MYCP01106 439 aaPredicted RBP8.06□□□□□ -1.12
SMG6-204ENST00000570606 EN2P19622 333 aaPredicted RBP8.06□□□□□ -1.12
SMG6-204ENST00000570606 PRDX5P30044 214 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 INPP5BP32019 993 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 LACTBP83111 547 aaPredicted RBP8.06□□□□□ -1.12
SMG6-204ENST00000570606 PPATQ06203 517 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 KMT5BQ4FZB7 885 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 ATG9AQ7Z3C6 839 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.06□□□□□ -1.12
SMG6-204ENST00000570606 ARHGAP39Q9C0H5 1083 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.06□□□□□ -1.12
SMG6-204ENST00000570606 CEP126Q9P2H0 1117 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 DENND2AQ9ULE3 1009 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 HDAC5Q9UQL6 1122 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 ATAD5Q96QE3 1844 aa8.06□□□□□ -1.12
SMG6-204ENST00000570606 ACTN4O43707 911 aaKnown RBP8.05□□□□□ -1.12
SMG6-204ENST00000570606 IL15P40933 162 aaPredicted RBP8.05□□□□□ -1.12
SMG6-204ENST00000570606 PHKA1P46020 1223 aa8.05□□□□□ -1.12
SMG6-204ENST00000570606 CTDSPL2Q05D32 466 aa8.05□□□□□ -1.12
SMG6-204ENST00000570606 NFIAQ12857 509 aa8.05□□□□□ -1.12
SMG6-204ENST00000570606 MORN1Q5T089 497 aa8.05□□□□□ -1.12
SMG6-204ENST00000570606 CDC42EP5Q6NZY7 148 aa8.05□□□□□ -1.12
SMG6-204ENST00000570606 DZIP1Q86YF9 867 aaKnown RBP8.05□□□□□ -1.12
SMG6-204ENST00000570606 ZGPATQ8N5A5 531 aaKnown RBP8.05□□□□□ -1.12
SMG6-204ENST00000570606 SH3TC2Q8TF17 1288 aa8.05□□□□□ -1.12
SMG6-204ENST00000570606 API5Q9BZZ5 524 aaKnown RBP8.05□□□□□ -1.12
SMG6-204ENST00000570606 HMX1Q9NP08 348 aaPredicted RBP8.05□□□□□ -1.12
SMG6-204ENST00000570606 USP40Q9NVE5 1235 aa8.05□□□□□ -1.12
SMG6-204ENST00000570606 CPA4Q9UI42 421 aa8.05□□□□□ -1.12
SMG6-204ENST00000570606 NOB1Q9ULX3 412 aaKnown RBP8.05□□□□□ -1.12
SMG6-204ENST00000570606 PA2G4Q9UQ80 394 aaKnown RBP8.05□□□□□ -1.12
SMG6-204ENST00000570606 LRRFIP2Q9Y608 721 aaKnown RBP8.05□□□□□ -1.12
SMG6-204ENST00000570606 SALL1Q9NSC2 1324 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 PHIPQ8WWQ0 1821 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 PDHXO00330 501 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 GNRH1P01148 92 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 CT47B1P0C2W7 299 aaPredicted RBP8.04□□□□□ -1.12
SMG6-204ENST00000570606 ADORA1P30542 326 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 NOL9Q5SY16 702 aaKnown RBP8.04□□□□□ -1.12
SMG6-204ENST00000570606 ANKRD23Q86SG2 305 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 ZSCAN29Q8IWY8 852 aaPredicted RBP8.04□□□□□ -1.12
SMG6-204ENST00000570606 RAET1EQ8TD07 263 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 PARK7Q99497 189 aaKnown RBP8.04□□□□□ -1.12
SMG6-204ENST00000570606 PICK1Q9NRD5 415 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 ABCF2Q9UG63 623 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 KCNH4Q9UQ05 1017 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 MAST2Q6P0Q8 1798 aa8.04□□□□□ -1.12
SMG6-204ENST00000570606 MYPNQ86TC9 1320 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 RFX7Q2KHR2 1363 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 GPR37L1O60883 481 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 FMNL1O95466 1100 aaPredicted RBP8.03□□□□□ -1.12
SMG6-204ENST00000570606 HOXD10P28358 340 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms