RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	PLXNB2	O15031	1838 aa		13.55	□□□□□ -0.24
CMC2-223	ENST00000570195	GDF11	O95390	407 aa		13.54	□□□□□ -0.24
CMC2-223	ENST00000570195	ASNS	P08243	561 aa		13.54	□□□□□ -0.24
CMC2-223	ENST00000570195	CT47B1	P0C2W7	299 aa	Predicted RBP	13.54	□□□□□ -0.24
CMC2-223	ENST00000570195	HOXA7	P31268	230 aa	Predicted RBP	13.54	□□□□□ -0.24
CMC2-223	ENST00000570195	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
CMC2-223	ENST00000570195		Q3C1V9	767 aa		13.54	□□□□□ -0.24
CMC2-223	ENST00000570195	MAP3K21	Q5TCX8	1036 aa		13.54	□□□□□ -0.24
CMC2-223	ENST00000570195	GPRC5A	Q8NFJ5	357 aa		13.54	□□□□□ -0.24
CMC2-223	ENST00000570195	TGFBRAP1	Q8WUH2	860 aa		13.54	□□□□□ -0.24
CMC2-223	ENST00000570195	PAGR1	Q9BTK6	254 aa		13.54	□□□□□ -0.24
CMC2-223	ENST00000570195	DHX36	Q9H2U1	1008 aa	Known RBP	13.54	□□□□□ -0.24
CMC2-223	ENST00000570195	PNMA6E	A0A0J9YXQ4	647 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	USP17L10	C9JJH3	530 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	BAG3	O95817	575 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	UQCRFS1P1	P0C7P4	283 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	ZKSCAN1	P17029	563 aa	Predicted RBP	13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	RARS	P54136	660 aa	Known RBP	13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	CACNB2	Q08289	660 aa	Predicted RBP	13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	PDE3A	Q14432	1141 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	CCL14	Q16627	93 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	LRIT3	Q3SXY7	679 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	NAA16	Q6N069	864 aa	Predicted RBP	13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	ADGRA1	Q86SQ6	560 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	CCAR1	Q8IX12	1150 aa	Known RBP	13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	TDH	Q8IZJ6	230 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	SOCS4	Q8WXH5	440 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	TRIM34	Q9BYJ4	488 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	UBE2O	Q9C0C9	1292 aa	Known RBP	13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	PORCN	Q9H237	461 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	RBPJL	Q9UBG7	517 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	PALD1	Q9ULE6	856 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	SIPA1L1	O43166	1804 aa		13.53	□□□□□ -0.24
CMC2-223	ENST00000570195	C19orf81	C9J6K1	198 aa		13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	XRCC5	P13010	732 aa	Known RBP	13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	CCND3	P30281	292 aa	Predicted RBP	13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	MAPK4	P31152	587 aa		13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	ERVK-9	P63128	1117 aa		13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	ERVK-24	P63145	666 aa		13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	GPR153	Q6NV75	609 aa		13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	GPR142	Q7Z601	462 aa		13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	SAP30BP	Q9UHR5	308 aa	Known RBP	13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	ZBTB21	Q9ULJ3	1066 aa		13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	TNN	Q9UQP3	1299 aa		13.52	□□□□□ -0.25
CMC2-223	ENST00000570195	FLT1	P17948	1338 aa		13.52	□□□□□ -0.25
CMC2-223	ENST00000570195		A0A0C4DFX4	3053 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	GNAI2	P04899	355 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	COL6A1	P12109	1028 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	PLCG2	P16885	1265 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	RGS2	P41220	211 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	LRRC26	Q2I0M4	334 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	TTC39A	Q5SRH9	613 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	POTEE	Q6S8J3	1075 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	ARHGAP45	Q92619	1136 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	USP6NL	Q92738	828 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	DBNDD2	Q9BQY9	259 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	CWC22	Q9HCG8	908 aa	Known RBP	13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	EMILIN3	Q9NT22	766 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	MTMR10	Q9NXD2	777 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	CUL9	Q8IWT3	2517 aa		13.51	□□□□□ -0.25
CMC2-223	ENST00000570195	CYP2E1	P05181	493 aa	Predicted RBP	13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	PPP4C	P60510	307 aa		13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	DYNLL1	P63167	89 aa	Known RBP	13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	MDM2	Q00987	491 aa	Predicted RBP	13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	ZYX	Q15942	572 aa	Known RBP	13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	MORN1	Q5T089	497 aa		13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	LHX8	Q68G74	356 aa		13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	PLEKHH3	Q7Z736	793 aa		13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	METTL16	Q86W50	562 aa	Known RBP	13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	TRMT44	Q8IYL2	757 aa	Known RBP	13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	STXBP5L	Q9Y2K9	1186 aa		13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	NDUFB9	Q9Y6M9	179 aa		13.5	□□□□□ -0.25
CMC2-223	ENST00000570195	HLA-DOA	P06340	250 aa		13.49	□□□□□ -0.25
CMC2-223	ENST00000570195	TNNI3K	Q59H18	835 aa		13.49	□□□□□ -0.25
CMC2-223	ENST00000570195	CCDC158	Q5M9N0	1113 aa		13.49	□□□□□ -0.25
CMC2-223	ENST00000570195	USP17L2	Q6R6M4	530 aa		13.49	□□□□□ -0.25
CMC2-223	ENST00000570195	APBA2	Q99767	749 aa		13.49	□□□□□ -0.25
CMC2-223	ENST00000570195	GINM1	Q9NU53	330 aa		13.49	□□□□□ -0.25
CMC2-223	ENST00000570195	FPGT-TNNI3K	V9GXZ4	949 aa		13.49	□□□□□ -0.25
CMC2-223	ENST00000570195	GH2	P01242	217 aa		13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	TRIM27	P14373	513 aa		13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	ZAP70	P43403	619 aa		13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	MAP2K5	Q13163	448 aa		13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	OS9	Q13438	667 aa	Predicted RBP	13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	WDR78	Q5VTH9	848 aa		13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	FRAT1	Q92837	279 aa	Predicted RBP	13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	CLUAP1	Q96AJ1	413 aa		13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	FEZ1	Q99689	392 aa		13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	PIH1D3	Q9NQM4	214 aa	Known RBP	13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	MAST2	Q6P0Q8	1798 aa		13.48	□□□□□ -0.25
CMC2-223	ENST00000570195	CNMD	O75829	334 aa		13.47	□□□□□ -0.25
CMC2-223	ENST00000570195	CYP7A1	P22680	504 aa		13.47	□□□□□ -0.25
CMC2-223	ENST00000570195	ATF7IP	Q6VMQ6	1270 aa		13.47	□□□□□ -0.25
CMC2-223	ENST00000570195	EDC3	Q96F86	508 aa	Known RBP	13.47	□□□□□ -0.25
CMC2-223	ENST00000570195	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.47	□□□□□ -0.25
CMC2-223	ENST00000570195	GPR108	Q9NPR9	543 aa		13.47	□□□□□ -0.25
CMC2-223	ENST00000570195	FLRT1	Q9NZU1	646 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms