RNA–Protein interactions for RNA: ENST00000569573.1

E2F4-213, Transcript of E2F transcription factor 4, humanhuman

TSL 3

Gene E2F4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-213ENST00000569573 HMX1Q9NP08 348 aaPredicted RBP31.28■■■□□ 2.6
E2F4-213ENST00000569573 GINM1Q9NU53 330 aa31.28■■■□□ 2.6
E2F4-213ENST00000569573 MORF4L1Q9UBU8 362 aa31.28■■■□□ 2.6
E2F4-213ENST00000569573 USP17L10C9JJH3 530 aa31.27■■■□□ 2.6
E2F4-213ENST00000569573 CCAR1Q8IX12 1150 aaKnown RBP31.27■■■□□ 2.6
E2F4-213ENST00000569573 DNAJC18Q9H819 358 aa31.27■■■□□ 2.6
E2F4-213ENST00000569573 RPTORQ8N122 1335 aa31.26■■■□□ 2.6
E2F4-213ENST00000569573 CYP7A1P22680 504 aa31.26■■■□□ 2.59
E2F4-213ENST00000569573 HOXA7P31268 230 aaPredicted RBP31.26■■■□□ 2.59
E2F4-213ENST00000569573 GPRC5AQ8NFJ5 357 aa31.26■■■□□ 2.59
E2F4-213ENST00000569573 P2RX7Q99572 595 aaKnown RBP31.26■■■□□ 2.59
E2F4-213ENST00000569573 PIH1D3Q9NQM4 214 aaKnown RBP31.26■■■□□ 2.59
E2F4-213ENST00000569573 GJD2Q9UKL4 321 aa31.26■■■□□ 2.59
E2F4-213ENST00000569573 ZBTB21Q9ULJ3 1066 aa31.26■■■□□ 2.59
E2F4-213ENST00000569573 IDH1O75874 414 aaKnown RBP31.25■■■□□ 2.59
E2F4-213ENST00000569573 HERVK_113P62684 666 aa31.25■■■□□ 2.59
E2F4-213ENST00000569573 CCDC8Q9H0W5 538 aaPredicted RBP31.25■■■□□ 2.59
E2F4-213ENST00000569573 DBNLQ9UJU6 430 aaKnown RBP31.25■■■□□ 2.59
E2F4-213ENST00000569573 SIPA1L1O43166 1804 aa31.25■■■□□ 2.59
E2F4-213ENST00000569573 CYP2B6P20813 491 aa31.24■■■□□ 2.59
E2F4-213ENST00000569573 DYNLL1P63167 89 aaKnown RBP31.24■■■□□ 2.59
E2F4-213ENST00000569573 PDE3AQ14432 1141 aa31.24■■■□□ 2.59
E2F4-213ENST00000569573 METTL16Q86W50 562 aaKnown RBP31.24■■■□□ 2.59
E2F4-213ENST00000569573 ANKLE1Q8NAG6 615 aa31.24■■■□□ 2.59
E2F4-213ENST00000569573 NUDT12Q9BQG2 462 aa31.24■■■□□ 2.59
E2F4-213ENST00000569573 USP5P45974 858 aa31.23■■■□□ 2.59
E2F4-213ENST00000569573 JAG1P78504 1218 aa31.23■■■□□ 2.59
E2F4-213ENST00000569573 CERS3Q8IU89 383 aa31.23■■■□□ 2.59
E2F4-213ENST00000569573 DIS3LQ8TF46 1054 aaKnown RBP31.23■■■□□ 2.59
E2F4-213ENST00000569573 SOCS4Q8WXH5 440 aa31.23■■■□□ 2.59
E2F4-213ENST00000569573 TLR7Q9NYK1 1049 aaKnown RBP31.23■■■□□ 2.59
E2F4-213ENST00000569573 NOP58Q9Y2X3 529 aaKnown RBP31.23■■■□□ 2.59
E2F4-213ENST00000569573 CWC22Q9HCG8 908 aaKnown RBP31.22■■■□□ 2.59
E2F4-213ENST00000569573 FOCADQ5VW36 1801 aa31.21■■■□□ 2.59
E2F4-213ENST00000569573 CDK5RAP2Q96SN8 1893 aa31.21■■■□□ 2.59
E2F4-213ENST00000569573 MAPK4P31152 587 aa31.21■■■□□ 2.59
E2F4-213ENST00000569573 TRIM32Q13049 653 aa31.21■■■□□ 2.59
E2F4-213ENST00000569573 SHROOM1Q2M3G4 852 aaPredicted RBP31.21■■■□□ 2.59
E2F4-213ENST00000569573 MIGA1Q8NAN2 632 aa31.21■■■□□ 2.59
E2F4-213ENST00000569573 GTF3C2Q8WUA4 911 aaPredicted RBP31.21■■■□□ 2.59
E2F4-213ENST00000569573 TRIB2Q92519 343 aa31.21■■■□□ 2.59
E2F4-213ENST00000569573 PRO3102Q9H379 93 aa31.21■■■□□ 2.59
E2F4-213ENST00000569573 USP17L2Q6R6M4 530 aa31.2■■■□□ 2.59
E2F4-213ENST00000569573 MAGEB6Q8N7X4 407 aa31.2■■■□□ 2.59
E2F4-213ENST00000569573 FEZ1Q99689 392 aa31.2■■■□□ 2.59
E2F4-213ENST00000569573 PAGR1Q9BTK6 254 aa31.2■■■□□ 2.59
E2F4-213ENST00000569573 TXNRD2Q9NNW7 524 aa31.2■■■□□ 2.59
E2F4-213ENST00000569573 MYO5AQ9Y4I1 1855 aaKnown RBP31.19■■■□□ 2.58
E2F4-213ENST00000569573 A0A1W2PPC1 479 aa31.19■■■□□ 2.58
E2F4-213ENST00000569573 PEX10O60683 326 aa31.19■■■□□ 2.58
E2F4-213ENST00000569573 GH2P01242 217 aa31.19■■■□□ 2.58
E2F4-213ENST00000569573 EAF2Q96CJ1 260 aaPredicted RBP31.19■■■□□ 2.58
E2F4-213ENST00000569573 NBPF3Q9H094 633 aa31.19■■■□□ 2.58
E2F4-213ENST00000569573 PRKAR2AP13861 404 aaKnown RBP31.18■■■□□ 2.58
E2F4-213ENST00000569573 HNRNPUQ00839 825 aaKnown RBP eCLIP31.18■■■□□ 2.58
E2F4-213ENST00000569573 MAP3K12Q12852 859 aa31.18■■■□□ 2.58
E2F4-213ENST00000569573 TRMT44Q8IYL2 757 aaKnown RBP31.18■■■□□ 2.58
E2F4-213ENST00000569573 C7orf61Q8IZ16 206 aa31.18■■■□□ 2.58
E2F4-213ENST00000569573 STAP2Q9UGK3 403 aa31.18■■■□□ 2.58
E2F4-213ENST00000569573 ZKSCAN1P17029 563 aaPredicted RBP31.17■■■□□ 2.58
E2F4-213ENST00000569573 ERVK-9P63128 1117 aa31.17■■■□□ 2.58
E2F4-213ENST00000569573 ERVK-24P63145 666 aa31.17■■■□□ 2.58
E2F4-213ENST00000569573 ZYXQ15942 572 aaKnown RBP31.17■■■□□ 2.58
E2F4-213ENST00000569573 RBPJLQ9UBG7 517 aa31.17■■■□□ 2.58
E2F4-213ENST00000569573 SERPINB13Q9UIV8 391 aa31.17■■■□□ 2.58
E2F4-213ENST00000569573 XRCC5P13010 732 aaKnown RBP31.16■■■□□ 2.58
E2F4-213ENST00000569573 TTC6Q86TZ1 520 aa31.16■■■□□ 2.58
E2F4-213ENST00000569573 C11orf49Q9H6J7 331 aa31.16■■■□□ 2.58
E2F4-213ENST00000569573 EMILIN3Q9NT22 766 aa31.16■■■□□ 2.58
E2F4-213ENST00000569573 RAB3GAP1Q15042 981 aa31.15■■■□□ 2.58
E2F4-213ENST00000569573 ERC1Q8IUD2 1116 aa31.15■■■□□ 2.58
E2F4-213ENST00000569573 NDUFB9Q9Y6M9 179 aa31.15■■■□□ 2.58
E2F4-213ENST00000569573 RLBP1P12271 317 aa31.14■■■□□ 2.58
E2F4-213ENST00000569573 RGS2P41220 211 aa31.14■■■□□ 2.58
E2F4-213ENST00000569573 GPR142Q7Z601 462 aa31.14■■■□□ 2.58
E2F4-213ENST00000569573 PLEKHH3Q7Z736 793 aa31.14■■■□□ 2.58
E2F4-213ENST00000569573 AACSQ86V21 672 aa31.14■■■□□ 2.58
E2F4-213ENST00000569573 MYH1P12882 1939 aa31.14■■■□□ 2.57
E2F4-213ENST00000569573 PLXNB2O15031 1838 aa31.13■■■□□ 2.57
E2F4-213ENST00000569573 USP14P54578 494 aa31.13■■■□□ 2.57
E2F4-213ENST00000569573 Q3C1V9 767 aa31.13■■■□□ 2.57
E2F4-213ENST00000569573 TMED8Q6PL24 325 aaPredicted RBP31.13■■■□□ 2.57
E2F4-213ENST00000569573 EHD4Q9H223 541 aa31.13■■■□□ 2.57
E2F4-213ENST00000569573 PORCNQ9H237 461 aa31.13■■■□□ 2.57
E2F4-213ENST00000569573 CABP5Q9NP86 173 aa31.13■■■□□ 2.57
E2F4-213ENST00000569573 OGDHLQ9ULD0 1010 aa31.13■■■□□ 2.57
E2F4-213ENST00000569573 ZMYND8Q9ULU4 1186 aaPredicted RBP31.13■■■□□ 2.57
E2F4-213ENST00000569573 EXOC6BQ9Y2D4 811 aa31.13■■■□□ 2.57
E2F4-213ENST00000569573 USP17L15C9J2P7 530 aa31.12■■■□□ 2.57
E2F4-213ENST00000569573 USP17L13C9JLJ4 530 aa31.12■■■□□ 2.57
E2F4-213ENST00000569573 USP17L11C9JVI0 530 aa31.12■■■□□ 2.57
E2F4-213ENST00000569573 USP17L18D6R9N7 530 aa31.12■■■□□ 2.57
E2F4-213ENST00000569573 USP17L22D6RA61 530 aa31.12■■■□□ 2.57
E2F4-213ENST00000569573 USP17L17D6RBQ6 530 aa31.12■■■□□ 2.57
E2F4-213ENST00000569573 USP17L19D6RCP7 530 aa31.12■■■□□ 2.57
E2F4-213ENST00000569573 USP17L20D6RJB6 530 aa31.12■■■□□ 2.57
E2F4-213ENST00000569573 CCNA1P78396 465 aa31.12■■■□□ 2.57
E2F4-213ENST00000569573 USP17L24Q0WX57 530 aa31.12■■■□□ 2.57
E2F4-213ENST00000569573 CERKLQ49MI3 558 aaPredicted RBP31.12■■■□□ 2.57
E2F4-213ENST00000569573 MAP3K21Q5TCX8 1036 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms