RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 MAP4K1Q92918 833 aa19.04■□□□□ 0.64
USB1-215ENST00000569252 TEPSINQ96N21 525 aa19.04■□□□□ 0.64
USB1-215ENST00000569252 MKNK2Q9HBH9 465 aa19.04■□□□□ 0.64
USB1-215ENST00000569252 PCDH10Q9P2E7 1040 aa19.04■□□□□ 0.64
USB1-215ENST00000569252 TBC1D12O60347 775 aa19.03■□□□□ 0.64
USB1-215ENST00000569252 MCCP23508 829 aa19.03■□□□□ 0.64
USB1-215ENST00000569252 IREB2P48200 963 aaKnown RBP19.03■□□□□ 0.64
USB1-215ENST00000569252 PTH1RQ03431 593 aa19.03■□□□□ 0.64
USB1-215ENST00000569252 OTOP1Q7RTM1 612 aa19.03■□□□□ 0.64
USB1-215ENST00000569252 CD99L2Q8TCZ2 262 aa19.03■□□□□ 0.64
USB1-215ENST00000569252 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
USB1-215ENST00000569252 SLC10A4Q96EP9 437 aa19.03■□□□□ 0.64
USB1-215ENST00000569252 ZNF341Q9BYN7 854 aa19.03■□□□□ 0.64
USB1-215ENST00000569252 UPF2Q9HAU5 1272 aaKnown RBP19.03■□□□□ 0.64
USB1-215ENST00000569252 SWAP70Q9UH65 585 aa19.03■□□□□ 0.64
USB1-215ENST00000569252 ATRNL1Q5VV63 1379 aa19.03■□□□□ 0.64
USB1-215ENST00000569252 ZMYM6O95789 1325 aa19.02■□□□□ 0.64
USB1-215ENST00000569252 PLCD1P51178 756 aa19.02■□□□□ 0.64
USB1-215ENST00000569252 PPARAQ07869 468 aa19.02■□□□□ 0.64
USB1-215ENST00000569252 SH3BP5LQ7L8J4 393 aa19.02■□□□□ 0.64
USB1-215ENST00000569252 LSG1Q9H089 658 aaKnown RBP19.02■□□□□ 0.64
USB1-215ENST00000569252 EHD4Q9H223 541 aa19.02■□□□□ 0.64
USB1-215ENST00000569252 IL25Q9H293 177 aa19.02■□□□□ 0.64
USB1-215ENST00000569252 RNF41Q9H4P4 317 aaPredicted RBP19.02■□□□□ 0.64
USB1-215ENST00000569252 EPB41L4AQ9HCS5 686 aaPredicted RBP19.02■□□□□ 0.64
USB1-215ENST00000569252 COL2A1P02458 1487 aaPredicted RBP19.02■□□□□ 0.63
USB1-215ENST00000569252 EPB41L2O43491 1005 aaKnown RBP19.01■□□□□ 0.63
USB1-215ENST00000569252 CYP2D6P10635 497 aa19.01■□□□□ 0.63
USB1-215ENST00000569252 CRHR2Q13324 411 aa19.01■□□□□ 0.63
USB1-215ENST00000569252 ZNF444Q8N0Y2 327 aaPredicted RBP19.01■□□□□ 0.63
USB1-215ENST00000569252 STK11IPQ8N1F8 1099 aa19.01■□□□□ 0.63
USB1-215ENST00000569252 PTPN18Q99952 460 aa19.01■□□□□ 0.63
USB1-215ENST00000569252 RBM8AQ9Y5S9 174 aaKnown RBP19.01■□□□□ 0.63
USB1-215ENST00000569252 ZSWIM8A7E2V4 1837 aa19.01■□□□□ 0.63
USB1-215ENST00000569252 CYP2D7A0A087X1C5 515 aa19■□□□□ 0.63
USB1-215ENST00000569252 ZKSCAN1P17029 563 aaPredicted RBP19■□□□□ 0.63
USB1-215ENST00000569252 HAND2P61296 217 aa19■□□□□ 0.63
USB1-215ENST00000569252 MFSD6Q6ZSS7 791 aa19■□□□□ 0.63
USB1-215ENST00000569252 ELP3Q9H9T3 547 aa19■□□□□ 0.63
USB1-215ENST00000569252 TOMM22Q9NS69 142 aa19■□□□□ 0.63
USB1-215ENST00000569252 USP2O75604 605 aaPredicted RBP18.99■□□□□ 0.63
USB1-215ENST00000569252 ECM2O94769 699 aaPredicted RBP18.99■□□□□ 0.63
USB1-215ENST00000569252 MYCP01106 439 aaPredicted RBP18.99■□□□□ 0.63
USB1-215ENST00000569252 PCP11498 1178 aaKnown RBP18.99■□□□□ 0.63
USB1-215ENST00000569252 TRDNQ13061 729 aa18.99■□□□□ 0.63
USB1-215ENST00000569252 CERKLQ49MI3 558 aaPredicted RBP18.99■□□□□ 0.63
USB1-215ENST00000569252 CFHR5Q9BXR6 569 aa18.99■□□□□ 0.63
USB1-215ENST00000569252 ANAPC4Q9UJX5 808 aa18.99■□□□□ 0.63
USB1-215ENST00000569252 MANSC4A6NHS7 340 aaPredicted RBP18.98■□□□□ 0.63
USB1-215ENST00000569252 FOXP2O15409 715 aa18.98■□□□□ 0.63
USB1-215ENST00000569252 EN2P19622 333 aaPredicted RBP18.98■□□□□ 0.63
USB1-215ENST00000569252 CDK8P49336 464 aa18.98■□□□□ 0.63
USB1-215ENST00000569252 MAP3K10Q02779 954 aa18.98■□□□□ 0.63
USB1-215ENST00000569252 CTDSPL2Q05D32 466 aa18.98■□□□□ 0.63
USB1-215ENST00000569252 C8orf34Q49A92 452 aa18.98■□□□□ 0.63
USB1-215ENST00000569252 NOM1Q5C9Z4 860 aaKnown RBP18.98■□□□□ 0.63
USB1-215ENST00000569252 C16orf86Q6ZW13 317 aa18.98■□□□□ 0.63
USB1-215ENST00000569252 METTL16Q86W50 562 aaKnown RBP18.98■□□□□ 0.63
USB1-215ENST00000569252 DYNLL2Q96FJ2 89 aa18.98■□□□□ 0.63
USB1-215ENST00000569252 CABP5Q9NP86 173 aa18.98■□□□□ 0.63
USB1-215ENST00000569252 CSADQ9Y600 493 aa18.98■□□□□ 0.63
USB1-215ENST00000569252 MAP3K9P80192 1104 aa18.97■□□□□ 0.63
USB1-215ENST00000569252 MAP3K11Q16584 847 aa18.97■□□□□ 0.63
USB1-215ENST00000569252 AKNAD1Q5T1N1 836 aa18.97■□□□□ 0.63
USB1-215ENST00000569252 WRNIP1Q96S55 665 aa18.97■□□□□ 0.63
USB1-215ENST00000569252 CNNM2Q9H8M5 875 aa18.97■□□□□ 0.63
USB1-215ENST00000569252 LAMB1P07942 1786 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 MYH1P12882 1939 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 UNCXA6NJT0 531 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 MPHOSPH10O00566 681 aaKnown RBP18.96■□□□□ 0.63
USB1-215ENST00000569252 CTNND1O60716 968 aaKnown RBP18.96■□□□□ 0.63
USB1-215ENST00000569252 NT5C2P49902 561 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 RRP12Q5JTH9 1297 aaKnown RBP18.96■□□□□ 0.63
USB1-215ENST00000569252 CREB3L3Q68CJ9 461 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 ANKRD13AQ8IZ07 590 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 CCDC17Q96LX7 622 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 USP26Q9BXU7 913 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 KRT23Q9C075 422 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 PICK1Q9NRD5 415 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 PTPN22Q9Y2R2 807 aa18.96■□□□□ 0.63
USB1-215ENST00000569252 FOCADQ5VW36 1801 aa18.95■□□□□ 0.62
USB1-215ENST00000569252 NAV1Q8NEY1 1877 aa18.95■□□□□ 0.62
USB1-215ENST00000569252 FAM196BA6NMK8 535 aa18.95■□□□□ 0.62
USB1-215ENST00000569252 GABPAQ06546 454 aa18.95■□□□□ 0.62
USB1-215ENST00000569252 KRT32Q14532 448 aa18.95■□□□□ 0.62
USB1-215ENST00000569252 NECTIN1Q15223 517 aa18.95■□□□□ 0.62
USB1-215ENST00000569252 TATDN1Q6P1N9 297 aa18.95■□□□□ 0.62
USB1-215ENST00000569252 RALYLQ86SE5 291 aaKnown RBP18.95■□□□□ 0.62
USB1-215ENST00000569252 GINM1Q9NU53 330 aa18.95■□□□□ 0.62
USB1-215ENST00000569252 SLC27A2O14975 620 aa18.94■□□□□ 0.62
USB1-215ENST00000569252 RANBP6O60518 1105 aaKnown RBP18.94■□□□□ 0.62
USB1-215ENST00000569252 CYP21A2P08686 494 aa18.94■□□□□ 0.62
USB1-215ENST00000569252 TSPY3P0CV98 308 aa18.94■□□□□ 0.62
USB1-215ENST00000569252 TSPY8P0CW00 308 aa18.94■□□□□ 0.62
USB1-215ENST00000569252 ZBTB48P10074 688 aaPredicted RBP18.94■□□□□ 0.62
USB1-215ENST00000569252 ABCB5Q2M3G0 1257 aa18.94■□□□□ 0.62
USB1-215ENST00000569252 STAG1Q8WVM7 1258 aa18.94■□□□□ 0.62
USB1-215ENST00000569252 ESR2Q92731 530 aa18.94■□□□□ 0.62
USB1-215ENST00000569252 OPTNQ96CV9 577 aa18.94■□□□□ 0.62
USB1-215ENST00000569252 ZNF112Q9UJU3 913 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms