RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
CNOT1-215ENST00000569020 GINM1Q9NU53 330 aa16.68■□□□□ 0.26
CNOT1-215ENST00000569020 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
CNOT1-215ENST00000569020 COLQQ9Y215 455 aaPredicted RBP16.68■□□□□ 0.26
CNOT1-215ENST00000569020 C19orf81C9J6K1 198 aa16.67■□□□□ 0.26
CNOT1-215ENST00000569020 IDH1O75874 414 aaKnown RBP16.67■□□□□ 0.26
CNOT1-215ENST00000569020 BACE1P56817 501 aa16.67■□□□□ 0.26
CNOT1-215ENST00000569020 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
CNOT1-215ENST00000569020 MTMR2Q13614 643 aa16.67■□□□□ 0.26
CNOT1-215ENST00000569020 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
CNOT1-215ENST00000569020 METTL16Q86W50 562 aaKnown RBP16.67■□□□□ 0.26
CNOT1-215ENST00000569020 ERC1Q8IUD2 1116 aa16.67■□□□□ 0.26
CNOT1-215ENST00000569020 DNAJC18Q9H819 358 aa16.67■□□□□ 0.26
CNOT1-215ENST00000569020 USP17L10C9JJH3 530 aa16.66■□□□□ 0.26
CNOT1-215ENST00000569020 FARP2O94887 1054 aaPredicted RBP16.66■□□□□ 0.26
CNOT1-215ENST00000569020 DYNLL1P63167 89 aaKnown RBP16.66■□□□□ 0.26
CNOT1-215ENST00000569020 SAP30BPQ9UHR5 308 aaKnown RBP16.66■□□□□ 0.26
CNOT1-215ENST00000569020 PLXNB2O15031 1838 aa16.66■□□□□ 0.26
CNOT1-215ENST00000569020 GDF11O95390 407 aa16.65■□□□□ 0.26
CNOT1-215ENST00000569020 TFRCP02786 760 aaKnown RBP16.65■□□□□ 0.26
CNOT1-215ENST00000569020 USP5P45974 858 aa16.65■□□□□ 0.26
CNOT1-215ENST00000569020 MAP3K12Q12852 859 aa16.65■□□□□ 0.26
CNOT1-215ENST00000569020 TMED8Q6PL24 325 aaPredicted RBP16.65■□□□□ 0.26
CNOT1-215ENST00000569020 UBE2Q1Q7Z7E8 422 aa16.65■□□□□ 0.26
CNOT1-215ENST00000569020 MAGEB6Q8N7X4 407 aa16.65■□□□□ 0.26
CNOT1-215ENST00000569020 DEFB118Q96PH6 123 aa16.65■□□□□ 0.26
CNOT1-215ENST00000569020 EXOC6BQ9Y2D4 811 aa16.65■□□□□ 0.26
CNOT1-215ENST00000569020 HOXA7P31268 230 aaPredicted RBP16.64■□□□□ 0.25
CNOT1-215ENST00000569020 FXR1P51114 621 aaKnown RBP eCLIP16.64■□□□□ 0.25
CNOT1-215ENST00000569020 JAG1P78504 1218 aa16.64■□□□□ 0.25
CNOT1-215ENST00000569020 HSP90AB4PQ58FF6 505 aa16.64■□□□□ 0.25
CNOT1-215ENST00000569020 AACSQ86V21 672 aa16.64■□□□□ 0.25
CNOT1-215ENST00000569020 MIGA1Q8NAN2 632 aa16.64■□□□□ 0.25
CNOT1-215ENST00000569020 PAK6Q9NQU5 681 aaPredicted RBP16.64■□□□□ 0.25
CNOT1-215ENST00000569020 MORF4L1Q9UBU8 362 aa16.64■□□□□ 0.25
CNOT1-215ENST00000569020 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
CNOT1-215ENST00000569020 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
CNOT1-215ENST00000569020 HMGCRP04035 888 aa16.63■□□□□ 0.25
CNOT1-215ENST00000569020 MS4A1P11836 297 aa16.63■□□□□ 0.25
CNOT1-215ENST00000569020 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
CNOT1-215ENST00000569020 NR2E3Q9Y5X4 410 aa16.63■□□□□ 0.25
CNOT1-215ENST00000569020 NDUFB9Q9Y6M9 179 aa16.63■□□□□ 0.25
CNOT1-215ENST00000569020 NAV1Q8NEY1 1877 aa16.63■□□□□ 0.25
CNOT1-215ENST00000569020 HERVK_113P62684 666 aa16.62■□□□□ 0.25
CNOT1-215ENST00000569020 CHRDL2Q6WN34 429 aa16.62■□□□□ 0.25
CNOT1-215ENST00000569020 TTC6Q86TZ1 520 aa16.62■□□□□ 0.25
CNOT1-215ENST00000569020 GPRC5AQ8NFJ5 357 aa16.62■□□□□ 0.25
CNOT1-215ENST00000569020 PANK1Q8TE04 598 aa16.62■□□□□ 0.25
CNOT1-215ENST00000569020 P2RX7Q99572 595 aaKnown RBP16.62■□□□□ 0.25
CNOT1-215ENST00000569020 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.62■□□□□ 0.255e-7■■□□□ 13.8
CNOT1-215ENST00000569020 GJD2Q9UKL4 321 aa16.62■□□□□ 0.25
CNOT1-215ENST00000569020 TTF1Q15361 905 aaPredicted RBP16.61■□□□□ 0.25
CNOT1-215ENST00000569020 SHROOM1Q2M3G4 852 aaPredicted RBP16.61■□□□□ 0.25
CNOT1-215ENST00000569020 TATDN1Q6P1N9 297 aa16.61■□□□□ 0.25
CNOT1-215ENST00000569020 USP17L2Q6R6M4 530 aa16.61■□□□□ 0.25
CNOT1-215ENST00000569020 RHPN1Q8TCX5 695 aa16.61■□□□□ 0.25
CNOT1-215ENST00000569020 GTF3C2Q8WUA4 911 aaPredicted RBP16.61■□□□□ 0.25
CNOT1-215ENST00000569020 EHD4Q9H223 541 aa16.61■□□□□ 0.25
CNOT1-215ENST00000569020 HMX1Q9NP08 348 aaPredicted RBP16.61■□□□□ 0.25
CNOT1-215ENST00000569020 IL1RAPL2Q9NP60 686 aa16.61■□□□□ 0.25
CNOT1-215ENST00000569020 SERPINB13Q9UIV8 391 aa16.61■□□□□ 0.25
CNOT1-215ENST00000569020 MYH8P13535 1937 aa16.6■□□□□ 0.25
CNOT1-215ENST00000569020 DDX60LQ5H9U9 1706 aaKnown RBP16.6■□□□□ 0.25
CNOT1-215ENST00000569020 EVI5O60447 810 aa16.6■□□□□ 0.25
CNOT1-215ENST00000569020 GH2P01242 217 aa16.6■□□□□ 0.25
CNOT1-215ENST00000569020 CCAR1Q8IX12 1150 aaKnown RBP16.6■□□□□ 0.25
CNOT1-215ENST00000569020 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
CNOT1-215ENST00000569020 SOCS4Q8WXH5 440 aa16.6■□□□□ 0.25
CNOT1-215ENST00000569020 FEZ1Q99689 392 aa16.6■□□□□ 0.25
CNOT1-215ENST00000569020 NUDT12Q9BQG2 462 aa16.6■□□□□ 0.25
CNOT1-215ENST00000569020 CRISPLD2Q9H0B8 497 aa16.6■□□□□ 0.25
CNOT1-215ENST00000569020 EMILIN3Q9NT22 766 aa16.6■□□□□ 0.25
CNOT1-215ENST00000569020 RPTORQ8N122 1335 aa16.6■□□□□ 0.25
CNOT1-215ENST00000569020 ALPK3Q96L96 1907 aa16.6■□□□□ 0.25
CNOT1-215ENST00000569020 CYP2B6P20813 491 aa16.59■□□□□ 0.25
CNOT1-215ENST00000569020 MAPK4P31152 587 aa16.59■□□□□ 0.25
CNOT1-215ENST00000569020 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
CNOT1-215ENST00000569020 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
CNOT1-215ENST00000569020 NECAB2Q7Z6G3 386 aa16.59■□□□□ 0.25
CNOT1-215ENST00000569020 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
CNOT1-215ENST00000569020 ANKLE1Q8NAG6 615 aa16.59■□□□□ 0.25
CNOT1-215ENST00000569020 TXNRD2Q9NNW7 524 aa16.59■□□□□ 0.25
CNOT1-215ENST00000569020 CABP5Q9NP86 173 aa16.59■□□□□ 0.25
CNOT1-215ENST00000569020 RBPJLQ9UBG7 517 aa16.59■□□□□ 0.25
CNOT1-215ENST00000569020 MAGEB6P1A0A0J9YX57 407 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 HMMRO75330 724 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 USP14P54578 494 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 ERVK-9P63128 1117 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 ERVK-24P63145 666 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 RAB3GAP1Q15042 981 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 ZYXQ15942 572 aaKnown RBP16.58■□□□□ 0.24
CNOT1-215ENST00000569020 ABCB5Q2M3G0 1257 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 TRIB2Q92519 343 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 KIF1BPQ96EK5 621 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 PAWRQ96IZ0 340 aaKnown RBP16.58■□□□□ 0.24
CNOT1-215ENST00000569020 C12orf42Q96LP6 360 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 PAGR1Q9BTK6 254 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 RBM27Q9P2N5 1060 aaKnown RBP16.58■□□□□ 0.24
CNOT1-215ENST00000569020 DDX19BQ9UMR2 479 aa16.58■□□□□ 0.24
CNOT1-215ENST00000569020 APBB1O00213 710 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms