RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 ATP2B2Q01814 1243 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 CACNB1Q02641 598 aaPredicted RBP12.01□□□□□ -0.49
KARS-209ENST00000568378 MAP2K5Q13163 448 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 LRRC24Q50LG9 513 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 BEND3Q5T5X7 828 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 CCDC129Q6ZRS4 1044 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 EDC3Q96F86 508 aaKnown RBP12.01□□□□□ -0.49
KARS-209ENST00000568378 OSBPL5Q9H0X9 879 aaPredicted RBP12.01□□□□□ -0.49
KARS-209ENST00000568378 PORCNQ9H237 461 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 KIF16BQ96L93 1317 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
KARS-209ENST00000568378 RLFQ13129 1914 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 FAM196BA6NMK8 535 aa12□□□□□ -0.49
KARS-209ENST00000568378 RAG1P15918 1043 aa12□□□□□ -0.49
KARS-209ENST00000568378 FPGSQ05932 587 aa12□□□□□ -0.49
KARS-209ENST00000568378 MTMR2Q13614 643 aa12□□□□□ -0.49
KARS-209ENST00000568378 SNX17Q15036 470 aa12□□□□□ -0.49
KARS-209ENST00000568378 PUM3Q15397 648 aaKnown RBP12□□□□□ -0.49
KARS-209ENST00000568378 SH3D19Q5HYK7 790 aa12□□□□□ -0.49
KARS-209ENST00000568378 WDR78Q5VTH9 848 aa12□□□□□ -0.49
KARS-209ENST00000568378 VGLL2Q8N8G2 317 aa12□□□□□ -0.49
KARS-209ENST00000568378 GTF3C2Q8WUA4 911 aaPredicted RBP12□□□□□ -0.49
KARS-209ENST00000568378 EPHX3Q9H6B9 360 aa12□□□□□ -0.49
KARS-209ENST00000568378 TACC3Q9Y6A5 838 aa12□□□□□ -0.49
KARS-209ENST00000568378 TBC1D12O60347 775 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 CLTBP09497 229 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 SLC5A1P13866 664 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 HOXA7P31268 230 aaPredicted RBP11.99□□□□□ -0.49
KARS-209ENST00000568378 TLE2Q04725 743 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 AAK1Q2M2I8 961 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 Q3C1V9 767 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 FERMT2Q96AC1 680 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 DDX4Q9NQI0 724 aaKnown RBP11.99□□□□□ -0.49
KARS-209ENST00000568378 FLRT1Q9NZU1 646 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 CXXC1Q9P0U4 656 aaPredicted RBP11.99□□□□□ -0.49
KARS-209ENST00000568378 RBPJLQ9UBG7 517 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 NDUFB9Q9Y6M9 179 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 RFX7Q2KHR2 1363 aa11.99□□□□□ -0.49
KARS-209ENST00000568378 TCF20Q9UGU0 1960 aaKnown RBP11.99□□□□□ -0.49
KARS-209ENST00000568378 BMP1P13497 986 aa11.98□□□□□ -0.49
KARS-209ENST00000568378 ITGB8P26012 769 aa11.98□□□□□ -0.49
KARS-209ENST00000568378 CYP2C19P33261 490 aa11.98□□□□□ -0.49
KARS-209ENST00000568378 ADCYAP1R1P41586 468 aa11.98□□□□□ -0.49
KARS-209ENST00000568378 CCNA1P78396 465 aa11.98□□□□□ -0.49
KARS-209ENST00000568378 C1QBPQ07021 282 aaKnown RBP11.98□□□□□ -0.49
KARS-209ENST00000568378 ANO1Q5XXA6 986 aa11.98□□□□□ -0.49
KARS-209ENST00000568378 SUCLG2Q96I99 432 aa11.98□□□□□ -0.49
KARS-209ENST00000568378 ATAD5Q96QE3 1844 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 CAP2P40123 477 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 PBX2P40425 430 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 BACE1P56817 501 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 ADGRE1Q14246 886 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 DZIP1Q86YF9 867 aaKnown RBP11.97□□□□□ -0.49
KARS-209ENST00000568378 SLF2Q8IX21 1173 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 MICALL1Q8N3F8 863 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 TRPV1Q8NER1 839 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 GNL3LQ9NVN8 582 aaKnown RBP11.97□□□□□ -0.49
KARS-209ENST00000568378 IVNS1ABPQ9Y6Y0 642 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 MUC6Q6W4X9 2439 aa11.97□□□□□ -0.49
KARS-209ENST00000568378 GAKO14976 1311 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 SALL1Q9NSC2 1324 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 SLC15A5A6NIM6 579 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 KIAA0355O15063 1070 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 PQBP1O60828 265 aaKnown RBP11.96□□□□□ -0.49
KARS-209ENST00000568378 CYBAP13498 195 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 FGFR2P21802 821 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 BTDP43251 543 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 TFF2Q03403 129 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 SKIV2LQ15477 1246 aaKnown RBP11.96□□□□□ -0.49
KARS-209ENST00000568378 C1orf53Q5VUE5 145 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 ZGPATQ8N5A5 531 aaKnown RBP11.96□□□□□ -0.49
KARS-209ENST00000568378 LPIN2Q92539 896 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 TMEM39AQ9NV64 488 aa11.96□□□□□ -0.49
KARS-209ENST00000568378 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.5
KARS-209ENST00000568378 FAM86C2PA6NEL3 165 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 GRXCR1A8MXD5 290 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 C19orf81C9J6K1 198 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 ALDH1L1O75891 902 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 PTPREP23469 700 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 MRE11P49959 708 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 KCNQ1P51787 676 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 SLC4A10Q6U841 1118 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 NPLOC4Q8TAT6 608 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 KLHDC4Q8TBB5 520 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 WDR18Q9BV38 432 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 BICC1Q9H694 974 aaKnown RBP11.95□□□□□ -0.5
KARS-209ENST00000568378 MSRAQ9UJ68 235 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 DENND2AQ9ULE3 1009 aa11.95□□□□□ -0.5
KARS-209ENST00000568378 MYO9BQ13459 2157 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 PLXNA1Q9UIW2 1896 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 USP17L10C9JJH3 530 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 SEPT4O43236 478 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 GPR37L1O60883 481 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 HOXC6P09630 235 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 RRP1BQ14684 758 aaKnown RBP11.94□□□□□ -0.5
KARS-209ENST00000568378 LRRC41Q15345 812 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 CCDC174Q6PII3 467 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 KAZALD1Q96I82 304 aa11.94□□□□□ -0.5
KARS-209ENST00000568378 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.94□□□□□ -0.54e-6■■■□□ 14.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms