RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 MRPL41Q8IXM3 137 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 SHKBP1Q8TBC3 707 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 NKD1Q969G9 470 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 GOLGA2P5Q9HBQ8 144 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 PICK1Q9NRD5 415 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 REV1Q9UBZ9 1251 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 ADAM30Q9UKF2 790 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 PCDHB14Q9Y5E9 798 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 UPK3BL1B0FP48 263 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 UPK3BL2E5RIL1 263 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 CST3P01034 146 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 PLCG1P19174 1290 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 PRAMEF13Q5VWM6 474 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 OGFOD3Q6PK18 319 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 NPM2Q86SE8 214 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 SLC51AQ86UW1 340 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 REXO1Q8N1G1 1221 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 FBXL6Q8N531 539 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 KCT2Q8NC54 265 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 GPRASP2Q96D09 838 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 TMEM87BQ96K49 555 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 TBC1D32Q96NH3 1257 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 TINF2Q9BSI4 451 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 DUSP23Q9BVJ7 150 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 SSU72Q9NP77 194 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 GINM1Q9NU53 330 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 CNTNAP4Q9C0A0 1308 aa6.44□□□□□ -1.38
HERPUD1-212ENST00000567944 LRIG2O94898 1065 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 SLITRK5O94991 958 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 SOX9P48436 509 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 PDE4BQ07343 736 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 ZNF765Q7L2R6 523 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 CDC37L1Q7L3B6 337 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 RIN3Q8TB24 985 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 DPH2Q9BQC3 489 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 FOXQ1Q9C009 403 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 ANTXR1Q9H6X2 564 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 CCSER2Q9H7U1 834 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 U3KQE9 123 aa6.43□□□□□ -1.38
HERPUD1-212ENST00000567944 SLC22A31A6NKX4 558 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 WDR64B1ANS9 1081 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 CHURC1-FNTBB4DL54 471 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 GSC2O15499 205 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 EOMESO95936 686 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 FAM87AP0C7U9 286 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 SLC6A19Q695T7 634 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 GK5Q6ZS86 529 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 TOP6BLQ8N6T0 577 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 PPP1R13LQ8WUF5 828 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 PRDM10Q9NQV6 1147 aa6.42□□□□□ -1.38
HERPUD1-212ENST00000567944 MCM4P33991 863 aa6.41□□□□□ -1.38
HERPUD1-212ENST00000567944 ZNF165P49910 485 aa6.41□□□□□ -1.38
HERPUD1-212ENST00000567944 HEXIM2Q96MH2 286 aaKnown RBP6.41□□□□□ -1.38
HERPUD1-212ENST00000567944 ZNRF3Q9ULT6 936 aa6.41□□□□□ -1.38
HERPUD1-212ENST00000567944 PPT2Q9UMR5 302 aa6.41□□□□□ -1.38
HERPUD1-212ENST00000567944 EFR3BQ9Y2G0 817 aa6.41□□□□□ -1.38
HERPUD1-212ENST00000567944 INPP5FQ9Y2H2 1132 aa6.41□□□□□ -1.38
HERPUD1-212ENST00000567944 COL17A1Q9UMD9 1497 aaPredicted RBP6.41□□□□□ -1.38
HERPUD1-212ENST00000567944 TGFB1P01137 390 aa6.4□□□□□ -1.38
HERPUD1-212ENST00000567944 DIEXFQ68CQ4 756 aaKnown RBP6.4□□□□□ -1.38
HERPUD1-212ENST00000567944 SLFN12Q8IYM2 578 aa6.4□□□□□ -1.38
HERPUD1-212ENST00000567944 MFSD2AQ8NA29 543 aa6.4□□□□□ -1.38
HERPUD1-212ENST00000567944 DNAJB8Q8NHS0 232 aa6.4□□□□□ -1.38
HERPUD1-212ENST00000567944 MEIS3P2A8K0S8 358 aa6.39□□□□□ -1.39
HERPUD1-212ENST00000567944 MED26O95402 600 aa6.39□□□□□ -1.39
HERPUD1-212ENST00000567944 ATF4P18848 351 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-212ENST00000567944 HOXA10P31260 410 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-212ENST00000567944 OVOS1Q6IE37 1185 aa6.39□□□□□ -1.39
HERPUD1-212ENST00000567944 FAM13CQ8NE31 585 aa6.39□□□□□ -1.39
HERPUD1-212ENST00000567944 XAGE3Q8WTP9 111 aa6.39□□□□□ -1.39
HERPUD1-212ENST00000567944 CAPN10Q9HC96 672 aa6.39□□□□□ -1.39
HERPUD1-212ENST00000567944 GMIPQ9P107 970 aa6.39□□□□□ -1.39
HERPUD1-212ENST00000567944 KLHL3Q9UH77 587 aa6.39□□□□□ -1.39
HERPUD1-212ENST00000567944 HYAL3O43820 417 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 NASPP49321 788 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 COL9A2Q14055 689 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 LRP8Q14114 963 aa6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 CDCP2Q5VXM1 449 aa6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 LETMD1Q6P1Q0 360 aa6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 CCDC81Q6ZN84 652 aa6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 RBBP8NLQ8NC74 664 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 ATG4CQ96DT6 458 aa6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 SEC16BQ96JE7 1060 aa6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 SPATA32Q96LK8 384 aa6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 MIPEPQ99797 713 aa6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 CNNM2Q9H8M5 875 aa6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 RNF112Q9ULX5 631 aa6.38□□□□□ -1.39
HERPUD1-212ENST00000567944 ACRP10323 421 aa6.37□□□□□ -1.39
HERPUD1-212ENST00000567944 ARSHQ5FYA8 562 aa6.37□□□□□ -1.39
HERPUD1-212ENST00000567944 SLC43A3Q8NBI5 491 aa6.37□□□□□ -1.39
HERPUD1-212ENST00000567944 CYB5D2Q8WUJ1 264 aa6.37□□□□□ -1.39
HERPUD1-212ENST00000567944 TMEM40Q8WWA1 233 aa6.37□□□□□ -1.39
HERPUD1-212ENST00000567944 OSBPL1AQ9BXW6 950 aa6.37□□□□□ -1.39
HERPUD1-212ENST00000567944 ATG3Q9NT62 314 aa6.37□□□□□ -1.39
HERPUD1-212ENST00000567944 PIM2Q9P1W9 311 aa6.37□□□□□ -1.39
HERPUD1-212ENST00000567944 UBOX5O94941 541 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 FOSL1P15407 271 aa6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 POLR2BP30876 1174 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 YARSP54577 528 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-212ENST00000567944 OXCT1P55809 520 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms