RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 PICK1Q9NRD5 415 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 CPA4Q9UI42 421 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 ZHX2Q9Y6X8 837 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 ADGRA2Q96PE1 1338 aa11.31□□□□□ -0.6
CDH13-210ENST00000567445 MAP4K4O95819 1239 aaPredicted RBP11.31□□□□□ -0.6
CDH13-210ENST00000567445 LDHCP07864 332 aa11.31□□□□□ -0.6
CDH13-210ENST00000567445 PTPRAP18433 802 aa11.31□□□□□ -0.6
CDH13-210ENST00000567445 RHBDL3P58872 404 aa11.31□□□□□ -0.6
CDH13-210ENST00000567445 GSTO1P78417 241 aa11.31□□□□□ -0.6
CDH13-210ENST00000567445 ZKSCAN2Q63HK3 967 aa11.31□□□□□ -0.6
CDH13-210ENST00000567445 PI16Q6UXB8 463 aa11.31□□□□□ -0.6
CDH13-210ENST00000567445 ZNF384Q8TF68 577 aa11.31□□□□□ -0.6
CDH13-210ENST00000567445 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
CDH13-210ENST00000567445 ZSWIM8A7E2V4 1837 aa11.31□□□□□ -0.6
CDH13-210ENST00000567445 A0A0G2JLL6 359 aaPredicted RBP11.3□□□□□ -0.6
CDH13-210ENST00000567445 CTNND1O60716 968 aaKnown RBP11.3□□□□□ -0.6
CDH13-210ENST00000567445 UQCRFS1P1P0C7P4 283 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 PSMC4P43686 418 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 SLC4A8Q2Y0W8 1093 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 GPAT2Q6NUI2 795 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 TBC1D9Q6ZT07 1266 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 FASTKD5Q7L8L6 764 aaKnown RBP11.3□□□□□ -0.6
CDH13-210ENST00000567445 PRRT2Q7Z6L0 340 aaPredicted RBP11.3□□□□□ -0.6
CDH13-210ENST00000567445 TMEM57Q8N5G2 664 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 SH3TC2Q8TF17 1288 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 NSUN4Q96CB9 384 aaKnown RBP11.3□□□□□ -0.6
CDH13-210ENST00000567445 TRIM47Q96LD4 638 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 SLC24A3Q9HC58 644 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 RAI14Q9P0K7 980 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 AFG3L2Q9Y4W6 797 aa11.3□□□□□ -0.6
CDH13-210ENST00000567445 CYP2C8P10632 490 aa11.29□□□□□ -0.6
CDH13-210ENST00000567445 HOXD10P28358 340 aa11.29□□□□□ -0.6
CDH13-210ENST00000567445 CTGFP29279 349 aa11.29□□□□□ -0.6
CDH13-210ENST00000567445 MCAMP43121 646 aa11.29□□□□□ -0.6
CDH13-210ENST00000567445 SRRDQ9UH36 339 aa11.29□□□□□ -0.6
CDH13-210ENST00000567445 SLC45A1Q9Y2W3 748 aa11.29□□□□□ -0.6
CDH13-210ENST00000567445 HRO43593 1189 aa11.28□□□□□ -0.6
CDH13-210ENST00000567445 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
CDH13-210ENST00000567445 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
CDH13-210ENST00000567445 SLURP2P0DP57 97 aa11.28□□□□□ -0.6
CDH13-210ENST00000567445 BCRP11274 1271 aa11.28□□□□□ -0.6
CDH13-210ENST00000567445 OSBPP22059 807 aa11.28□□□□□ -0.6
CDH13-210ENST00000567445 SSH3Q8TE77 659 aa11.28□□□□□ -0.6
CDH13-210ENST00000567445 ZDHHC16Q969W1 377 aa11.28□□□□□ -0.6
CDH13-210ENST00000567445 GCC1Q96CN9 775 aa11.28□□□□□ -0.6
CDH13-210ENST00000567445 GPR108Q9NPR9 543 aa11.28□□□□□ -0.6
CDH13-210ENST00000567445 LRP2BPQ9P2M1 347 aa11.28□□□□□ -0.6
CDH13-210ENST00000567445 DOCK1Q14185 1865 aa11.28□□□□□ -0.6
CDH13-210ENST00000567445 COL2A1P02458 1487 aaPredicted RBP11.28□□□□□ -0.6
CDH13-210ENST00000567445 TRIM75PA6NK02 468 aa11.27□□□□□ -0.6
CDH13-210ENST00000567445 PTPREP23469 700 aa11.27□□□□□ -0.6
CDH13-210ENST00000567445 FCGRTP55899 365 aa11.27□□□□□ -0.6
CDH13-210ENST00000567445 ATP8B2P98198 1209 aa11.27□□□□□ -0.6
CDH13-210ENST00000567445 HNRNPUQ00839 825 aaKnown RBP eCLIP11.27□□□□□ -0.6
CDH13-210ENST00000567445 OS9Q13438 667 aaPredicted RBP11.27□□□□□ -0.6
CDH13-210ENST00000567445 TNNI3KQ59H18 835 aa11.27□□□□□ -0.6
CDH13-210ENST00000567445 GADL1Q6ZQY3 521 aa11.27□□□□□ -0.6
CDH13-210ENST00000567445 FTSJ3Q8IY81 847 aaKnown RBP11.27□□□□□ -0.6
CDH13-210ENST00000567445 RAET1EQ8TD07 263 aa11.27□□□□□ -0.6
CDH13-210ENST00000567445 NOL10Q9BSC4 688 aaKnown RBP11.27□□□□□ -0.6
CDH13-210ENST00000567445 OSBPL5Q9H0X9 879 aaPredicted RBP11.27□□□□□ -0.6
CDH13-210ENST00000567445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.27□□□□□ -0.6
CDH13-210ENST00000567445 FPGT-TNNI3KV9GXZ4 949 aa11.27□□□□□ -0.6
CDH13-210ENST00000567445 PTPRFP10586 1907 aa11.27□□□□□ -0.61
CDH13-210ENST00000567445 FAM196BA6NMK8 535 aa11.26□□□□□ -0.61
CDH13-210ENST00000567445 SURF6O75683 361 aaKnown RBP11.26□□□□□ -0.61
CDH13-210ENST00000567445 GRK4P32298 578 aa11.26□□□□□ -0.61
CDH13-210ENST00000567445 CCDC158Q5M9N0 1113 aa11.26□□□□□ -0.61
CDH13-210ENST00000567445 TTC39AQ5SRH9 613 aa11.26□□□□□ -0.61
CDH13-210ENST00000567445 TEX11Q8IYF3 940 aa11.26□□□□□ -0.61
CDH13-210ENST00000567445 DBNDD2Q9BQY9 259 aa11.26□□□□□ -0.61
CDH13-210ENST00000567445 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
CDH13-210ENST00000567445 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.26□□□□□ -0.61
CDH13-210ENST00000567445 PHIPQ8WWQ0 1821 aa11.26□□□□□ -0.61
CDH13-210ENST00000567445 MYPNQ86TC9 1320 aa11.26□□□□□ -0.61
CDH13-210ENST00000567445 PRKCZQ05513 592 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 NAA16Q6N069 864 aaPredicted RBP11.25□□□□□ -0.61
CDH13-210ENST00000567445 CCDC84Q86UT8 332 aaPredicted RBP11.25□□□□□ -0.61
CDH13-210ENST00000567445 ITPRIPQ8IWB1 547 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
CDH13-210ENST00000567445 SMCR8Q8TEV9 937 aaPredicted RBP11.25□□□□□ -0.61
CDH13-210ENST00000567445 C1orf115Q9H7X2 142 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 SNRKQ9NRH2 765 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 AGTPBP1Q9UPW5 1226 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 ZBTB7BO15156 539 aaPredicted RBP11.25□□□□□ -0.61
CDH13-210ENST00000567445 IGSF3O75054 1194 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 BAG3O95817 575 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 CYP2E1P05181 493 aaPredicted RBP11.25□□□□□ -0.61
CDH13-210ENST00000567445 RLBP1P12271 317 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 MTFR1Q15390 333 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 PROCA1Q8NCQ7 364 aaPredicted RBP11.25□□□□□ -0.61
CDH13-210ENST00000567445 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 ZNF512BQ96KM6 892 aaPredicted RBP11.25□□□□□ -0.61
CDH13-210ENST00000567445 TBC1D2Q9BYX2 928 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 DHX36Q9H2U1 1008 aaKnown RBP11.25□□□□□ -0.61
CDH13-210ENST00000567445 AATFQ9NY61 560 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDH13-210ENST00000567445 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
CDH13-210ENST00000567445 HERC5Q9UII4 1024 aaKnown RBP11.25□□□□□ -0.61
CDH13-210ENST00000567445 NOP58Q9Y2X3 529 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms