RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.89□□□□□ -0.19
SPG7-216ENST00000567138 UNC80Q8N2C7 3258 aa13.88□□□□□ -0.19
SPG7-216ENST00000567138 ZKSCAN1P17029 563 aaPredicted RBP13.88□□□□□ -0.19
SPG7-216ENST00000567138 GSTO1P78417 241 aa13.88□□□□□ -0.19
SPG7-216ENST00000567138 SHROOM1Q2M3G4 852 aaPredicted RBP13.88□□□□□ -0.19
SPG7-216ENST00000567138 NSUN4Q96CB9 384 aaKnown RBP13.88□□□□□ -0.19
SPG7-216ENST00000567138 NEUROD6Q96NK8 337 aa13.88□□□□□ -0.19
SPG7-216ENST00000567138 P2RX7Q99572 595 aaKnown RBP13.88□□□□□ -0.19
SPG7-216ENST00000567138 NUDT12Q9BQG2 462 aa13.88□□□□□ -0.19
SPG7-216ENST00000567138 RAI14Q9P0K7 980 aa13.88□□□□□ -0.19
SPG7-216ENST00000567138 LDHCP07864 332 aa13.87□□□□□ -0.19
SPG7-216ENST00000567138 CCND3P30281 292 aaPredicted RBP13.87□□□□□ -0.19
SPG7-216ENST00000567138 HERVK_113P62684 666 aa13.87□□□□□ -0.19
SPG7-216ENST00000567138 JAG1P78504 1218 aa13.87□□□□□ -0.19
SPG7-216ENST00000567138 MDM2Q00987 491 aaPredicted RBP13.87□□□□□ -0.19
SPG7-216ENST00000567138 CACNB2Q08289 660 aaPredicted RBP13.87□□□□□ -0.19
SPG7-216ENST00000567138 PDE3AQ14432 1141 aa13.87□□□□□ -0.19
SPG7-216ENST00000567138 CCL14Q16627 93 aa13.87□□□□□ -0.19
SPG7-216ENST00000567138 LRRC26Q2I0M4 334 aa13.87□□□□□ -0.19
SPG7-216ENST00000567138 SH3RF3Q8TEJ3 882 aaPredicted RBP13.87□□□□□ -0.19
SPG7-216ENST00000567138 SOCS4Q8WXH5 440 aa13.87□□□□□ -0.19
SPG7-216ENST00000567138 TMOD4Q9NZQ9 345 aa13.87□□□□□ -0.19
SPG7-216ENST00000567138 HERC5Q9UII4 1024 aaKnown RBP13.87□□□□□ -0.19
SPG7-216ENST00000567138 AKAP2Q9Y2D5 859 aa13.87□□□□□ -0.19
SPG7-216ENST00000567138 GDF11O95390 407 aa13.86□□□□□ -0.19
SPG7-216ENST00000567138 COL6A1P12109 1028 aa13.86□□□□□ -0.19
SPG7-216ENST00000567138 SPATA5Q8NB90 893 aa13.86□□□□□ -0.19
SPG7-216ENST00000567138 GPRC5AQ8NFJ5 357 aa13.86□□□□□ -0.19
SPG7-216ENST00000567138 PAGR1Q9BTK6 254 aa13.86□□□□□ -0.19
SPG7-216ENST00000567138 WDR18Q9BV38 432 aa13.86□□□□□ -0.19
SPG7-216ENST00000567138 PORCNQ9H237 461 aa13.86□□□□□ -0.19
SPG7-216ENST00000567138 NOB1Q9ULX3 412 aaKnown RBP13.86□□□□□ -0.19
SPG7-216ENST00000567138 RLFQ13129 1914 aa13.86□□□□□ -0.19
SPG7-216ENST00000567138 DNAH12Q6ZR08 3092 aa13.86□□□□□ -0.19
SPG7-216ENST00000567138 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
SPG7-216ENST00000567138 SRGAP3O43295 1099 aa13.85□□□□□ -0.19
SPG7-216ENST00000567138 MAP4K4O95819 1239 aaPredicted RBP13.85□□□□□ -0.19
SPG7-216ENST00000567138 CT47B1P0C2W7 299 aaPredicted RBP13.85□□□□□ -0.19
SPG7-216ENST00000567138 BACE1P56817 501 aa13.85□□□□□ -0.19
SPG7-216ENST00000567138 GORABQ5T7V8 394 aa13.85□□□□□ -0.19
SPG7-216ENST00000567138 COL25A1Q9BXS0 654 aaPredicted RBP13.85□□□□□ -0.19
SPG7-216ENST00000567138 DNAJC18Q9H819 358 aa13.85□□□□□ -0.19
SPG7-216ENST00000567138 ASNSP08243 561 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 XRCC5P13010 732 aaKnown RBP13.84□□□□□ -0.19
SPG7-216ENST00000567138 ARID4AP29374 1257 aaPredicted RBP13.84□□□□□ -0.19
SPG7-216ENST00000567138 MAPK4P31152 587 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
SPG7-216ENST00000567138 MCAMP43121 646 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 ERVK-9P63128 1117 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 ERVK-24P63145 666 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 Q3C1V9 767 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 LHX8Q68G74 356 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 GPR142Q7Z601 462 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 MAPKAPK5Q8IW41 473 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 CCAR1Q8IX12 1150 aaKnown RBP13.84□□□□□ -0.19
SPG7-216ENST00000567138 USP6NLQ92738 828 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 NOL10Q9BSC4 688 aaKnown RBP13.84□□□□□ -0.19
SPG7-216ENST00000567138 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
SPG7-216ENST00000567138 AATFQ9NY61 560 aaKnown RBP eCLIP13.84□□□□□ -0.19
SPG7-216ENST00000567138 PI4KBQ9UBF8 816 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 RBPJLQ9UBG7 517 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 DAXXQ9UER7 740 aaPredicted RBP13.84□□□□□ -0.19
SPG7-216ENST00000567138 HDAC5Q9UQL6 1122 aa13.84□□□□□ -0.19
SPG7-216ENST00000567138 LAMA2P24043 3122 aaKnown RBP13.84□□□□□ -0.19
SPG7-216ENST00000567138 RGS2P41220 211 aa13.83□□□□□ -0.19
SPG7-216ENST00000567138 TRMT44Q8IYL2 757 aaKnown RBP13.83□□□□□ -0.19
SPG7-216ENST00000567138 CRACR2BQ8N4Y2 399 aaPredicted RBP13.83□□□□□ -0.19
SPG7-216ENST00000567138 FAM161BQ96MY7 647 aa13.83□□□□□ -0.19
SPG7-216ENST00000567138 APBA2Q99767 749 aa13.83□□□□□ -0.19
SPG7-216ENST00000567138 CWC22Q9HCG8 908 aaKnown RBP13.83□□□□□ -0.19
SPG7-216ENST00000567138 LRP2BPQ9P2M1 347 aa13.83□□□□□ -0.19
SPG7-216ENST00000567138 FLT1P17948 1338 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 NAV1Q8NEY1 1877 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 USP17L10C9JJH3 530 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 MKRN4PQ13434 485 aaPredicted RBP13.83□□□□□ -0.2
SPG7-216ENST00000567138 MORN1Q5T089 497 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 POTEEQ6S8J3 1075 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 PLEKHH3Q7Z736 793 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.83□□□□□ -0.2
SPG7-216ENST00000567138 TGFBRAP1Q8WUH2 860 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 GUCD1Q96NT3 240 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 TRIM34Q9BYJ4 488 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 DHX36Q9H2U1 1008 aaKnown RBP13.83□□□□□ -0.2
SPG7-216ENST00000567138 SNRKQ9NRH2 765 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 SAP30BPQ9UHR5 308 aaKnown RBP13.83□□□□□ -0.2
SPG7-216ENST00000567138 ZBTB21Q9ULJ3 1066 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 NDUFB9Q9Y6M9 179 aa13.83□□□□□ -0.2
SPG7-216ENST00000567138 MYH8P13535 1937 aa13.82□□□□□ -0.2
SPG7-216ENST00000567138 C19orf81C9J6K1 198 aa13.82□□□□□ -0.2
SPG7-216ENST00000567138 ZYXQ15942 572 aaKnown RBP13.82□□□□□ -0.2
SPG7-216ENST00000567138 NAA16Q6N069 864 aaPredicted RBP13.82□□□□□ -0.2
SPG7-216ENST00000567138 GNAI3P08754 354 aa13.81□□□□□ -0.2
SPG7-216ENST00000567138 RARSP54136 660 aaKnown RBP13.81□□□□□ -0.2
SPG7-216ENST00000567138 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
SPG7-216ENST00000567138 MTX1Q13505 466 aa13.81□□□□□ -0.2
SPG7-216ENST00000567138 WDR78Q5VTH9 848 aa13.81□□□□□ -0.2
SPG7-216ENST00000567138 ADGRA1Q86SQ6 560 aa13.81□□□□□ -0.2
SPG7-216ENST00000567138 GTF3C2Q8WUA4 911 aaPredicted RBP13.81□□□□□ -0.2
SPG7-216ENST00000567138 SENP6Q9GZR1 1112 aaPredicted RBP13.81□□□□□ -0.2
SPG7-216ENST00000567138 EMILIN3Q9NT22 766 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms