RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 BACE1P56817 501 aa19.06■□□□□ 0.64
PALB2-205ENST00000567003 Q7L0L9 218 aa19.06■□□□□ 0.64
PALB2-205ENST00000567003 TGFBRAP1Q8WUH2 860 aa19.06■□□□□ 0.64
PALB2-205ENST00000567003 NOL10Q9BSC4 688 aaKnown RBP19.06■□□□□ 0.64
PALB2-205ENST00000567003 WDR18Q9BV38 432 aa19.06■□□□□ 0.64
PALB2-205ENST00000567003 TMOD4Q9NZQ9 345 aa19.06■□□□□ 0.64
PALB2-205ENST00000567003 PI4KBQ9UBF8 816 aa19.06■□□□□ 0.64
PALB2-205ENST00000567003 PFASO15067 1338 aa19.05■□□□□ 0.64
PALB2-205ENST00000567003 FLT1P17948 1338 aa19.05■□□□□ 0.64
PALB2-205ENST00000567003 DNAH12Q6ZR08 3092 aa19.05■□□□□ 0.64
PALB2-205ENST00000567003 HERVK_113P62684 666 aa19.05■□□□□ 0.64
PALB2-205ENST00000567003 G3BP1Q13283 466 aaKnown RBP eCLIP19.05■□□□□ 0.64
PALB2-205ENST00000567003 NAA16Q6N069 864 aaPredicted RBP19.05■□□□□ 0.64
PALB2-205ENST00000567003 SAP30BPQ9UHR5 308 aaKnown RBP19.05■□□□□ 0.64
PALB2-205ENST00000567003 OGDHLQ9ULD0 1010 aa19.05■□□□□ 0.64
PALB2-205ENST00000567003 UQCRFS1P1P0C7P4 283 aa19.04■□□□□ 0.64
PALB2-205ENST00000567003 BMP8BP34820 402 aa19.04■□□□□ 0.64
PALB2-205ENST00000567003 CCL14Q16627 93 aa19.04■□□□□ 0.64
PALB2-205ENST00000567003 Q3C1V9 767 aa19.04■□□□□ 0.64
PALB2-205ENST00000567003 MAP3K21Q5TCX8 1036 aa19.04■□□□□ 0.64
PALB2-205ENST00000567003 POTEEQ6S8J3 1075 aa19.04■□□□□ 0.64
PALB2-205ENST00000567003 DBNDD2Q9BQY9 259 aa19.04■□□□□ 0.64
PALB2-205ENST00000567003 PAGR1Q9BTK6 254 aa19.04■□□□□ 0.64
PALB2-205ENST00000567003 PORCNQ9H237 461 aa19.04■□□□□ 0.64
PALB2-205ENST00000567003 PALD1Q9ULE6 856 aa19.04■□□□□ 0.64
PALB2-205ENST00000567003 LAMA2P24043 3122 aaKnown RBP19.03■□□□□ 0.64
PALB2-205ENST00000567003 GNAI2P04899 355 aa19.03■□□□□ 0.64
PALB2-205ENST00000567003 ASNSP08243 561 aa19.03■□□□□ 0.64
PALB2-205ENST00000567003 TRIM27P14373 513 aa19.03■□□□□ 0.64
PALB2-205ENST00000567003 CCND3P30281 292 aaPredicted RBP19.03■□□□□ 0.64
PALB2-205ENST00000567003 HOXA7P31268 230 aaPredicted RBP19.03■□□□□ 0.64
PALB2-205ENST00000567003 TTC39AQ5SRH9 613 aa19.03■□□□□ 0.64
PALB2-205ENST00000567003 CRACR2BQ8N4Y2 399 aaPredicted RBP19.03■□□□□ 0.64
PALB2-205ENST00000567003 GPRC5AQ8NFJ5 357 aa19.03■□□□□ 0.64
PALB2-205ENST00000567003 NUDT12Q9BQG2 462 aa19.03■□□□□ 0.64
PALB2-205ENST00000567003 RBPJLQ9UBG7 517 aa19.03■□□□□ 0.64
PALB2-205ENST00000567003 ZBTB21Q9ULJ3 1066 aa19.03■□□□□ 0.64
PALB2-205ENST00000567003 CYP2E1P05181 493 aaPredicted RBP19.02■□□□□ 0.64
PALB2-205ENST00000567003 ZKSCAN1P17029 563 aaPredicted RBP19.02■□□□□ 0.64
PALB2-205ENST00000567003 DYNLL1P63167 89 aaKnown RBP19.02■□□□□ 0.64
PALB2-205ENST00000567003 CACNB2Q08289 660 aaPredicted RBP19.02■□□□□ 0.64
PALB2-205ENST00000567003 DEFB123Q8N688 67 aa19.02■□□□□ 0.64
PALB2-205ENST00000567003 ARHGAP45Q92619 1136 aa19.02■□□□□ 0.64
PALB2-205ENST00000567003 CLUAP1Q96AJ1 413 aa19.02■□□□□ 0.64
PALB2-205ENST00000567003 TRIM34Q9BYJ4 488 aa19.02■□□□□ 0.64
PALB2-205ENST00000567003 DHX36Q9H2U1 1008 aaKnown RBP19.02■□□□□ 0.64
PALB2-205ENST00000567003 UNC80Q8N2C7 3258 aa19.01■□□□□ 0.63
PALB2-205ENST00000567003 USP17L10C9JJH3 530 aa19.01■□□□□ 0.63
PALB2-205ENST00000567003 BAG3O95817 575 aa19.01■□□□□ 0.63
PALB2-205ENST00000567003 ERVK-9P63128 1117 aa19.01■□□□□ 0.63
PALB2-205ENST00000567003 ERVK-24P63145 666 aa19.01■□□□□ 0.63
PALB2-205ENST00000567003 SOCS4Q8WXH5 440 aa19.01■□□□□ 0.63
PALB2-205ENST00000567003 FRAT1Q92837 279 aaPredicted RBP19.01■□□□□ 0.63
PALB2-205ENST00000567003 PIH1D3Q9NQM4 214 aaKnown RBP19.01■□□□□ 0.63
PALB2-205ENST00000567003 EMILIN3Q9NT22 766 aa19.01■□□□□ 0.63
PALB2-205ENST00000567003 FRMPD3Q5JV73 1810 aa19.01■□□□□ 0.63
PALB2-205ENST00000567003 MYH1P12882 1939 aa19■□□□□ 0.63
PALB2-205ENST00000567003 BCAR3O75815 825 aa19■□□□□ 0.63
PALB2-205ENST00000567003 PPP4CP60510 307 aa19■□□□□ 0.63
PALB2-205ENST00000567003 PDE3AQ14432 1141 aa19■□□□□ 0.63
PALB2-205ENST00000567003 ZYXQ15942 572 aaKnown RBP19■□□□□ 0.63
PALB2-205ENST00000567003 TNNI3KQ59H18 835 aa19■□□□□ 0.63
PALB2-205ENST00000567003 GPR142Q7Z601 462 aa19■□□□□ 0.63
PALB2-205ENST00000567003 METTL16Q86W50 562 aaKnown RBP19■□□□□ 0.63
PALB2-205ENST00000567003 USP6NLQ92738 828 aa19■□□□□ 0.63
PALB2-205ENST00000567003 UBE2OQ9C0C9 1292 aaKnown RBP19■□□□□ 0.63
PALB2-205ENST00000567003 NDUFB9Q9Y6M9 179 aa19■□□□□ 0.63
PALB2-205ENST00000567003 FPGT-TNNI3KV9GXZ4 949 aa19■□□□□ 0.63
PALB2-205ENST00000567003 C19orf81C9J6K1 198 aa18.99■□□□□ 0.63
PALB2-205ENST00000567003 XRCC5P13010 732 aaKnown RBP18.99■□□□□ 0.63
PALB2-205ENST00000567003 PLCG2P16885 1265 aa18.99■□□□□ 0.63
PALB2-205ENST00000567003 MAPK4P31152 587 aa18.99■□□□□ 0.63
PALB2-205ENST00000567003 ZAP70P43403 619 aa18.99■□□□□ 0.63
PALB2-205ENST00000567003 LRRC26Q2I0M4 334 aa18.99■□□□□ 0.63
PALB2-205ENST00000567003 MORN1Q5T089 497 aa18.99■□□□□ 0.63
PALB2-205ENST00000567003 LHX8Q68G74 356 aa18.99■□□□□ 0.63
PALB2-205ENST00000567003 TDHQ8IZJ6 230 aa18.99■□□□□ 0.63
PALB2-205ENST00000567003 TLR7Q9NYK1 1049 aaKnown RBP18.99■□□□□ 0.63
PALB2-205ENST00000567003 CNMDO75829 334 aa18.98■□□□□ 0.63
PALB2-205ENST00000567003 GH2P01242 217 aa18.98■□□□□ 0.63
PALB2-205ENST00000567003 COL6A1P12109 1028 aa18.98■□□□□ 0.63
PALB2-205ENST00000567003 RGS2P41220 211 aa18.98■□□□□ 0.63
PALB2-205ENST00000567003 OS9Q13438 667 aaPredicted RBP18.98■□□□□ 0.63
PALB2-205ENST00000567003 ATF7IPQ6VMQ6 1270 aa18.98■□□□□ 0.63
PALB2-205ENST00000567003 PLEKHH3Q7Z736 793 aa18.98■□□□□ 0.63
PALB2-205ENST00000567003 FOXP4Q8IVH2 680 aaPredicted RBP18.98■□□□□ 0.63
PALB2-205ENST00000567003 CCAR1Q8IX12 1150 aaKnown RBP18.98■□□□□ 0.63
PALB2-205ENST00000567003 C1orf115Q9H7X2 142 aa18.98■□□□□ 0.63
PALB2-205ENST00000567003 MDM2Q00987 491 aaPredicted RBP18.97■□□□□ 0.63
PALB2-205ENST00000567003 LRIT3Q3SXY7 679 aa18.97■□□□□ 0.63
PALB2-205ENST00000567003 CCDC158Q5M9N0 1113 aa18.97■□□□□ 0.63
PALB2-205ENST00000567003 USP17L2Q6R6M4 530 aa18.97■□□□□ 0.63
PALB2-205ENST00000567003 TMEM57Q8N5G2 664 aa18.97■□□□□ 0.63
PALB2-205ENST00000567003 MIGA1Q8NAN2 632 aa18.97■□□□□ 0.63
PALB2-205ENST00000567003 APBA2Q99767 749 aa18.97■□□□□ 0.63
PALB2-205ENST00000567003 CWC22Q9HCG8 908 aaKnown RBP18.97■□□□□ 0.63
PALB2-205ENST00000567003 FLRT1Q9NZU1 646 aa18.97■□□□□ 0.63
PALB2-205ENST00000567003 HLA-DOAP06340 250 aa18.96■□□□□ 0.63
PALB2-205ENST00000567003 CYP7A1P22680 504 aa18.96■□□□□ 0.63
PALB2-205ENST00000567003 POLA2Q14181 598 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms